Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP03_T7_A01
(815 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z97632-6|CAI42404.1| 244|Homo sapiens HIV-1 Tat specific factor... 32 2.2
Z97632-5|CAI42403.1| 223|Homo sapiens HIV-1 Tat specific factor... 32 2.2
Z97632-4|CAB10730.1| 755|Homo sapiens HIV-1 Tat specific factor... 32 2.2
U76992-1|AAB18823.1| 754|Homo sapiens Tat-SF1 protein. 32 2.2
BT006886-1|AAP35532.1| 755|Homo sapiens HIV TAT specific factor... 32 2.2
BC009896-1|AAH09896.1| 755|Homo sapiens HIV-1 Tat specific fact... 32 2.2
U19765-1|AAA91782.1| 177|Homo sapiens nucleic acid binding prot... 32 2.9
M28372-1|AAA61975.1| 177|Homo sapiens SRE-binding protein protein. 32 2.9
BC093058-1|AAH93058.1| 177|Homo sapiens CCHC-type zinc finger, ... 32 2.9
BC014911-1|AAH14911.1| 170|Homo sapiens CNBP protein protein. 32 2.9
BC000288-1|AAH00288.1| 170|Homo sapiens CNBP protein protein. 32 2.9
AY329622-1|AAR89462.1| 177|Homo sapiens zinc finger protein 9 p... 32 2.9
DQ092366-1|AAY96754.1| 171|Homo sapiens cellular nucleic acid b... 31 5.0
DQ091187-1|AAY89856.1| 178|Homo sapiens cellular nucleic acid b... 31 5.0
BT019613-1|AAV38419.1| 178|Homo sapiens zinc finger protein 9 (... 31 5.0
BC075809-1|AAH75809.1| 549|Homo sapiens TBC1 domain family, mem... 31 5.0
BC071680-1|AAH71680.1| 549|Homo sapiens TBC1 domain family, mem... 31 5.0
BC007364-1|AAH07364.1| 299|Homo sapiens NmrA-like family domain... 31 5.0
BC002927-1|AAH02927.1| 299|Homo sapiens NMRAL1 protein protein. 31 5.0
AF540953-1|AAN33117.1| 549|Homo sapiens Rab GTPase-activating p... 31 5.0
AF225419-1|AAG09721.1| 299|Homo sapiens HSCARG protein. 31 5.0
AL132874-1|CAC05409.1| 136|Homo sapiens chromosome 6 open readi... 31 6.6
AK054592-1|BAB70769.1| 167|Homo sapiens protein ( Homo sapiens ... 31 6.6
AK000177-1|BAA90991.1| 136|Homo sapiens protein ( Homo sapiens ... 31 6.6
DQ092367-1|AAY96755.1| 172|Homo sapiens cellular nucleic acid b... 30 8.7
>Z97632-6|CAI42404.1| 244|Homo sapiens HIV-1 Tat specific factor 1
protein.
Length = 244
Score = 32.3 bits (70), Expect = 2.2
Identities = 18/58 (31%), Positives = 27/58 (46%)
Frame = -3
Query: 522 HARNVAHGIQIKVATPGDHRALSAYLRKENIGFHTYALQEDRELRVVIRGVPKELEID 349
HAR Q K P D R + E+ FH ++EDR V + G+P ++ +D
Sbjct: 93 HARTAEEPPQEKAPEPTDARKKGEKRKAESGWFH---VEEDRNTNVYVSGLPPDITVD 147
>Z97632-5|CAI42403.1| 223|Homo sapiens HIV-1 Tat specific factor 1
protein.
Length = 223
Score = 32.3 bits (70), Expect = 2.2
Identities = 18/58 (31%), Positives = 27/58 (46%)
Frame = -3
Query: 522 HARNVAHGIQIKVATPGDHRALSAYLRKENIGFHTYALQEDRELRVVIRGVPKELEID 349
HAR Q K P D R + E+ FH ++EDR V + G+P ++ +D
Sbjct: 93 HARTAEEPPQEKAPEPTDARKKGEKRKAESGWFH---VEEDRNTNVYVSGLPPDITVD 147
>Z97632-4|CAB10730.1| 755|Homo sapiens HIV-1 Tat specific factor 1
protein.
Length = 755
Score = 32.3 bits (70), Expect = 2.2
Identities = 18/58 (31%), Positives = 27/58 (46%)
Frame = -3
Query: 522 HARNVAHGIQIKVATPGDHRALSAYLRKENIGFHTYALQEDRELRVVIRGVPKELEID 349
HAR Q K P D R + E+ FH ++EDR V + G+P ++ +D
Sbjct: 93 HARTAEEPPQEKAPEPTDARKKGEKRKAESGWFH---VEEDRNTNVYVSGLPPDITVD 147
>U76992-1|AAB18823.1| 754|Homo sapiens Tat-SF1 protein.
Length = 754
Score = 32.3 bits (70), Expect = 2.2
Identities = 18/58 (31%), Positives = 27/58 (46%)
Frame = -3
Query: 522 HARNVAHGIQIKVATPGDHRALSAYLRKENIGFHTYALQEDRELRVVIRGVPKELEID 349
HAR Q K P D R + E+ FH ++EDR V + G+P ++ +D
Sbjct: 93 HARTAEEPPQEKAPEPTDARKKGEKRKAESGWFH---VEEDRNTNVYVSGLPPDITVD 147
>BT006886-1|AAP35532.1| 755|Homo sapiens HIV TAT specific factor 1
protein.
Length = 755
Score = 32.3 bits (70), Expect = 2.2
Identities = 18/58 (31%), Positives = 27/58 (46%)
Frame = -3
Query: 522 HARNVAHGIQIKVATPGDHRALSAYLRKENIGFHTYALQEDRELRVVIRGVPKELEID 349
HAR Q K P D R + E+ FH ++EDR V + G+P ++ +D
Sbjct: 93 HARTAEEPPQEKAPEPTDARKKGEKRKAESGWFH---VEEDRNTNVYVSGLPPDITVD 147
>BC009896-1|AAH09896.1| 755|Homo sapiens HIV-1 Tat specific factor
1 protein.
Length = 755
Score = 32.3 bits (70), Expect = 2.2
Identities = 18/58 (31%), Positives = 27/58 (46%)
Frame = -3
Query: 522 HARNVAHGIQIKVATPGDHRALSAYLRKENIGFHTYALQEDRELRVVIRGVPKELEID 349
HAR Q K P D R + E+ FH ++EDR V + G+P ++ +D
Sbjct: 93 HARTAEEPPQEKAPEPTDARKKGEKRKAESGWFH---VEEDRNTNVYVSGLPPDITVD 147
>U19765-1|AAA91782.1| 177|Homo sapiens nucleic acid binding protein
protein.
Length = 177
Score = 31.9 bits (69), Expect = 2.9
Identities = 15/37 (40%), Positives = 18/37 (48%), Gaps = 2/37 (5%)
Frame = -3
Query: 147 PGQCYRCQLYGHSARNCHAR-PRCVKC-LGDHATLDC 43
P CYRC GH A++C + C C G H DC
Sbjct: 51 PDICYRCGESGHLAKDCDLQEDACYNCGRGGHIAKDC 87
Score = 30.3 bits (65), Expect = 8.7
Identities = 18/72 (25%), Positives = 36/72 (50%), Gaps = 3/72 (4%)
Frame = -3
Query: 234 PEAKKKIACLTTICGLSG-ISIEAPHRRGTPGQCYRCQLYGHSARNCHARPRCVKCLGD- 61
P+ +++ C CG G ++ + H +CY C +GH ++C + +C +C G+
Sbjct: 90 PKREREQCCYN--CGKPGHLARDCDH--ADEQKCYSCGEFGHIQKDC-TKVKCYRC-GET 143
Query: 60 -HATLDCVRDRE 28
H ++C + E
Sbjct: 144 GHVAINCSKTSE 155
>M28372-1|AAA61975.1| 177|Homo sapiens SRE-binding protein protein.
Length = 177
Score = 31.9 bits (69), Expect = 2.9
Identities = 15/37 (40%), Positives = 18/37 (48%), Gaps = 2/37 (5%)
Frame = -3
Query: 147 PGQCYRCQLYGHSARNCHAR-PRCVKC-LGDHATLDC 43
P CYRC GH A++C + C C G H DC
Sbjct: 51 PDICYRCGESGHLAKDCDLQEDACYNCGRGGHIAKDC 87
Score = 30.3 bits (65), Expect = 8.7
Identities = 18/72 (25%), Positives = 36/72 (50%), Gaps = 3/72 (4%)
Frame = -3
Query: 234 PEAKKKIACLTTICGLSG-ISIEAPHRRGTPGQCYRCQLYGHSARNCHARPRCVKCLGD- 61
P+ +++ C CG G ++ + H +CY C +GH ++C + +C +C G+
Sbjct: 90 PKREREQCCYN--CGKPGHLARDCDH--ADEQKCYSCGEFGHIQKDC-TKVKCYRC-GET 143
Query: 60 -HATLDCVRDRE 28
H ++C + E
Sbjct: 144 GHVAINCSKTSE 155
>BC093058-1|AAH93058.1| 177|Homo sapiens CCHC-type zinc finger,
nucleic acid binding protein protein.
Length = 177
Score = 31.9 bits (69), Expect = 2.9
Identities = 15/37 (40%), Positives = 18/37 (48%), Gaps = 2/37 (5%)
Frame = -3
Query: 147 PGQCYRCQLYGHSARNCHAR-PRCVKC-LGDHATLDC 43
P CYRC GH A++C + C C G H DC
Sbjct: 51 PDICYRCGESGHLAKDCDLQEDACYNCGRGGHIAKDC 87
Score = 30.3 bits (65), Expect = 8.7
Identities = 18/72 (25%), Positives = 36/72 (50%), Gaps = 3/72 (4%)
Frame = -3
Query: 234 PEAKKKIACLTTICGLSG-ISIEAPHRRGTPGQCYRCQLYGHSARNCHARPRCVKCLGD- 61
P+ +++ C CG G ++ + H +CY C +GH ++C + +C +C G+
Sbjct: 90 PKREREQCCYN--CGKPGHLARDCDH--ADEQKCYSCGEFGHIQKDC-TKVKCYRC-GET 143
Query: 60 -HATLDCVRDRE 28
H ++C + E
Sbjct: 144 GHVAINCSKTSE 155
>BC014911-1|AAH14911.1| 170|Homo sapiens CNBP protein protein.
Length = 170
Score = 31.9 bits (69), Expect = 2.9
Identities = 15/37 (40%), Positives = 18/37 (48%), Gaps = 2/37 (5%)
Frame = -3
Query: 147 PGQCYRCQLYGHSARNCHAR-PRCVKC-LGDHATLDC 43
P CYRC GH A++C + C C G H DC
Sbjct: 44 PDICYRCGESGHLAKDCDLQEDACYNCGRGGHIAKDC 80
Score = 30.3 bits (65), Expect = 8.7
Identities = 18/72 (25%), Positives = 36/72 (50%), Gaps = 3/72 (4%)
Frame = -3
Query: 234 PEAKKKIACLTTICGLSG-ISIEAPHRRGTPGQCYRCQLYGHSARNCHARPRCVKCLGD- 61
P+ +++ C CG G ++ + H +CY C +GH ++C + +C +C G+
Sbjct: 83 PKREREQCCYN--CGKPGHLARDCDH--ADEQKCYSCGEFGHIQKDC-TKVKCYRC-GET 136
Query: 60 -HATLDCVRDRE 28
H ++C + E
Sbjct: 137 GHVAINCSKTSE 148
>BC000288-1|AAH00288.1| 170|Homo sapiens CNBP protein protein.
Length = 170
Score = 31.9 bits (69), Expect = 2.9
Identities = 15/37 (40%), Positives = 18/37 (48%), Gaps = 2/37 (5%)
Frame = -3
Query: 147 PGQCYRCQLYGHSARNCHAR-PRCVKC-LGDHATLDC 43
P CYRC GH A++C + C C G H DC
Sbjct: 44 PDICYRCGESGHLAKDCDLQEDACYNCGRGGHIAKDC 80
Score = 30.3 bits (65), Expect = 8.7
Identities = 18/72 (25%), Positives = 36/72 (50%), Gaps = 3/72 (4%)
Frame = -3
Query: 234 PEAKKKIACLTTICGLSG-ISIEAPHRRGTPGQCYRCQLYGHSARNCHARPRCVKCLGD- 61
P+ +++ C CG G ++ + H +CY C +GH ++C + +C +C G+
Sbjct: 83 PKREREQCCYN--CGKPGHLARDCDH--ADEQKCYSCGEFGHIQKDC-TKVKCYRC-GET 136
Query: 60 -HATLDCVRDRE 28
H ++C + E
Sbjct: 137 GHVAINCSKTSE 148
>AY329622-1|AAR89462.1| 177|Homo sapiens zinc finger protein 9
protein.
Length = 177
Score = 31.9 bits (69), Expect = 2.9
Identities = 15/37 (40%), Positives = 18/37 (48%), Gaps = 2/37 (5%)
Frame = -3
Query: 147 PGQCYRCQLYGHSARNCHAR-PRCVKC-LGDHATLDC 43
P CYRC GH A++C + C C G H DC
Sbjct: 51 PDICYRCGESGHLAKDCDLQEDACYNCGRGGHIAKDC 87
Score = 30.3 bits (65), Expect = 8.7
Identities = 18/72 (25%), Positives = 36/72 (50%), Gaps = 3/72 (4%)
Frame = -3
Query: 234 PEAKKKIACLTTICGLSG-ISIEAPHRRGTPGQCYRCQLYGHSARNCHARPRCVKCLGD- 61
P+ +++ C CG G ++ + H +CY C +GH ++C + +C +C G+
Sbjct: 90 PKREREQCCYN--CGKPGHLARDCDH--ADEQKCYSCGEFGHIQKDC-TKVKCYRC-GET 143
Query: 60 -HATLDCVRDRE 28
H ++C + E
Sbjct: 144 GHVAINCSKTSE 155
>DQ092366-1|AAY96754.1| 171|Homo sapiens cellular nucleic acid
binding protein beta variant 1 protein.
Length = 171
Score = 31.1 bits (67), Expect = 5.0
Identities = 15/38 (39%), Positives = 18/38 (47%), Gaps = 3/38 (7%)
Frame = -3
Query: 147 PGQCYRCQLYGHSARNCHAR--PRCVKC-LGDHATLDC 43
P CYRC GH A++C + C C G H DC
Sbjct: 44 PDICYRCGESGHLAKDCDLQEDEACYNCGRGGHIAKDC 81
Score = 30.3 bits (65), Expect = 8.7
Identities = 18/72 (25%), Positives = 36/72 (50%), Gaps = 3/72 (4%)
Frame = -3
Query: 234 PEAKKKIACLTTICGLSG-ISIEAPHRRGTPGQCYRCQLYGHSARNCHARPRCVKCLGD- 61
P+ +++ C CG G ++ + H +CY C +GH ++C + +C +C G+
Sbjct: 84 PKREREQCCYN--CGKPGHLARDCDH--ADEQKCYSCGEFGHIQKDC-TKVKCYRC-GET 137
Query: 60 -HATLDCVRDRE 28
H ++C + E
Sbjct: 138 GHVAINCSKTSE 149
>DQ091187-1|AAY89856.1| 178|Homo sapiens cellular nucleic acid
binding protein alpha variant 1 protein.
Length = 178
Score = 31.1 bits (67), Expect = 5.0
Identities = 15/38 (39%), Positives = 18/38 (47%), Gaps = 3/38 (7%)
Frame = -3
Query: 147 PGQCYRCQLYGHSARNCHAR--PRCVKC-LGDHATLDC 43
P CYRC GH A++C + C C G H DC
Sbjct: 51 PDICYRCGESGHLAKDCDLQEDEACYNCGRGGHIAKDC 88
Score = 30.3 bits (65), Expect = 8.7
Identities = 18/72 (25%), Positives = 36/72 (50%), Gaps = 3/72 (4%)
Frame = -3
Query: 234 PEAKKKIACLTTICGLSG-ISIEAPHRRGTPGQCYRCQLYGHSARNCHARPRCVKCLGD- 61
P+ +++ C CG G ++ + H +CY C +GH ++C + +C +C G+
Sbjct: 91 PKREREQCCYN--CGKPGHLARDCDH--ADEQKCYSCGEFGHIQKDC-TKVKCYRC-GET 144
Query: 60 -HATLDCVRDRE 28
H ++C + E
Sbjct: 145 GHVAINCSKTSE 156
>BT019613-1|AAV38419.1| 178|Homo sapiens zinc finger protein 9 (a
cellular retroviral nucleic acid binding protein)
protein.
Length = 178
Score = 31.1 bits (67), Expect = 5.0
Identities = 15/38 (39%), Positives = 18/38 (47%), Gaps = 3/38 (7%)
Frame = -3
Query: 147 PGQCYRCQLYGHSARNCHAR--PRCVKC-LGDHATLDC 43
P CYRC GH A++C + C C G H DC
Sbjct: 51 PDICYRCGESGHLAKDCDLQEDEACYNCGRGGHIAKDC 88
Score = 30.3 bits (65), Expect = 8.7
Identities = 18/72 (25%), Positives = 36/72 (50%), Gaps = 3/72 (4%)
Frame = -3
Query: 234 PEAKKKIACLTTICGLSG-ISIEAPHRRGTPGQCYRCQLYGHSARNCHARPRCVKCLGD- 61
P+ +++ C CG G ++ + H +CY C +GH ++C + +C +C G+
Sbjct: 91 PKREREQCCYN--CGKPGHLARDCDH--ADEQKCYSCGEFGHIQKDC-TKVKCYRC-GET 144
Query: 60 -HATLDCVRDRE 28
H ++C + E
Sbjct: 145 GHVAINCSKTSE 156
>BC075809-1|AAH75809.1| 549|Homo sapiens TBC1 domain family, member
3G protein.
Length = 549
Score = 31.1 bits (67), Expect = 5.0
Identities = 17/36 (47%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Frame = -2
Query: 463 GPLSIPPKGEHRFPH-LCSSGGPRAPRSNTRSP*GA 359
G PP RFP + S+ PRAPRS+T P GA
Sbjct: 385 GDRQAPPGPPARFPRPIWSASPPRAPRSSTPCPGGA 420
>BC071680-1|AAH71680.1| 549|Homo sapiens TBC1 domain family, member
3C protein.
Length = 549
Score = 31.1 bits (67), Expect = 5.0
Identities = 17/36 (47%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Frame = -2
Query: 463 GPLSIPPKGEHRFPH-LCSSGGPRAPRSNTRSP*GA 359
G PP RFP + S+ PRAPRS+T P GA
Sbjct: 385 GDRQAPPGPPARFPRPIWSASPPRAPRSSTPCPGGA 420
>BC007364-1|AAH07364.1| 299|Homo sapiens NmrA-like family domain
containing 1 protein.
Length = 299
Score = 31.1 bits (67), Expect = 5.0
Identities = 19/59 (32%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
Frame = -3
Query: 522 HARNVAHGIQIKVATPGDHRALSAYLRKENIG-FHTYALQEDRELRVVIRGVPKELEID 349
H R V H ++ TP D+ L ++ F YAL+ DR++ + +R PK L +D
Sbjct: 231 HTRKVVHDAKM---TPEDYEKLGFPGARDLANMFRFYALRPDRDIELTLRLNPKALTLD 286
>BC002927-1|AAH02927.1| 299|Homo sapiens NMRAL1 protein protein.
Length = 299
Score = 31.1 bits (67), Expect = 5.0
Identities = 19/59 (32%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
Frame = -3
Query: 522 HARNVAHGIQIKVATPGDHRALSAYLRKENIG-FHTYALQEDRELRVVIRGVPKELEID 349
H R V H ++ TP D+ L ++ F YAL+ DR++ + +R PK L +D
Sbjct: 231 HTRKVVHDAKM---TPEDYEKLGFPGARDLANMFRFYALRPDRDIELTLRLNPKALTLD 286
>AF540953-1|AAN33117.1| 549|Homo sapiens Rab GTPase-activating
protein PRC17 protein.
Length = 549
Score = 31.1 bits (67), Expect = 5.0
Identities = 17/36 (47%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Frame = -2
Query: 463 GPLSIPPKGEHRFPH-LCSSGGPRAPRSNTRSP*GA 359
G PP RFP + S+ PRAPRS+T P GA
Sbjct: 385 GDRQAPPGPPARFPRPIWSASPPRAPRSSTPCPGGA 420
>AF225419-1|AAG09721.1| 299|Homo sapiens HSCARG protein.
Length = 299
Score = 31.1 bits (67), Expect = 5.0
Identities = 19/59 (32%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
Frame = -3
Query: 522 HARNVAHGIQIKVATPGDHRALSAYLRKENIG-FHTYALQEDRELRVVIRGVPKELEID 349
H R V H ++ TP D+ L ++ F YAL+ DR++ + +R PK L +D
Sbjct: 231 HTRKVVHDAKM---TPEDYEKLGFPGARDLANMFRFYALRPDRDIELTLRLNPKALTLD 286
>AL132874-1|CAC05409.1| 136|Homo sapiens chromosome 6 open reading
frame 61 protein.
Length = 136
Score = 30.7 bits (66), Expect = 6.6
Identities = 20/55 (36%), Positives = 24/55 (43%)
Frame = -1
Query: 629 PXSQK*XAPPPLILQEKTAXNRXSPGPSGQIKLTTPMRVTSRMGFRSRSQRRATI 465
P K +PPP + K NR GPS T PMRV+ R F+ R I
Sbjct: 59 PSESKSKSPPP---ERK---NRGERGPSSPPTTTAPMRVSKRKSFQLRGSTEKLI 107
>AK054592-1|BAB70769.1| 167|Homo sapiens protein ( Homo sapiens
cDNA FLJ30030 fis, clone 3NB692001339, highly similar to
CELLULAR NUCLEIC ACID BINDING PROTEIN. ).
Length = 167
Score = 30.7 bits (66), Expect = 6.6
Identities = 14/34 (41%), Positives = 17/34 (50%), Gaps = 2/34 (5%)
Frame = -3
Query: 138 CYRCQLYGHSARNCHAR-PRCVKC-LGDHATLDC 43
CYRC GH A++C + C C G H DC
Sbjct: 44 CYRCGESGHLAKDCDLQEDACYNCGRGGHIAKDC 77
Score = 30.3 bits (65), Expect = 8.7
Identities = 18/72 (25%), Positives = 36/72 (50%), Gaps = 3/72 (4%)
Frame = -3
Query: 234 PEAKKKIACLTTICGLSG-ISIEAPHRRGTPGQCYRCQLYGHSARNCHARPRCVKCLGD- 61
P+ +++ C CG G ++ + H +CY C +GH ++C + +C +C G+
Sbjct: 80 PKREREQCCYN--CGKPGHLARDCDH--ADEQKCYSCGEFGHIQKDC-TKVKCYRC-GET 133
Query: 60 -HATLDCVRDRE 28
H ++C + E
Sbjct: 134 GHVAINCSKTSE 145
>AK000177-1|BAA90991.1| 136|Homo sapiens protein ( Homo sapiens
cDNA FLJ20170 fis, clone COL09549. ).
Length = 136
Score = 30.7 bits (66), Expect = 6.6
Identities = 20/55 (36%), Positives = 24/55 (43%)
Frame = -1
Query: 629 PXSQK*XAPPPLILQEKTAXNRXSPGPSGQIKLTTPMRVTSRMGFRSRSQRRATI 465
P K +PPP + K NR GPS T PMRV+ R F+ R I
Sbjct: 59 PSESKSKSPPP---ERK---NRGERGPSSPPTTTAPMRVSKRKSFQLRGSTEKLI 107
>DQ092367-1|AAY96755.1| 172|Homo sapiens cellular nucleic acid
binding protein beta variant 2 protein.
Length = 172
Score = 30.3 bits (65), Expect = 8.7
Identities = 15/39 (38%), Positives = 18/39 (46%), Gaps = 4/39 (10%)
Frame = -3
Query: 147 PGQCYRCQLYGHSARNCHAR---PRCVKC-LGDHATLDC 43
P CYRC GH A++C + C C G H DC
Sbjct: 44 PDICYRCGESGHLAKDCDLQEDVEACYNCGRGGHIAKDC 82
Score = 30.3 bits (65), Expect = 8.7
Identities = 18/72 (25%), Positives = 36/72 (50%), Gaps = 3/72 (4%)
Frame = -3
Query: 234 PEAKKKIACLTTICGLSG-ISIEAPHRRGTPGQCYRCQLYGHSARNCHARPRCVKCLGD- 61
P+ +++ C CG G ++ + H +CY C +GH ++C + +C +C G+
Sbjct: 85 PKREREQCCYN--CGKPGHLARDCDH--ADEQKCYSCGEFGHIQKDC-TKVKCYRC-GET 138
Query: 60 -HATLDCVRDRE 28
H ++C + E
Sbjct: 139 GHVAINCSKTSE 150
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 105,556,159
Number of Sequences: 237096
Number of extensions: 2500913
Number of successful extensions: 5701
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 5234
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5676
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10147868276
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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