Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP03_FL5_P03
(837 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_03_1033 - 27035977-27036144,27036420-27036544,27036695-270367... 135 5e-32
07_01_0747 - 5724586-5724648,5725229-5725309,5725564-5725656,572... 125 4e-29
11_05_0099 - 19044772-19044837,19044896-19045051,19045529-190456... 87 1e-17
11_05_0100 - 19056465-19056470,19057043-19057276,19058391-190585... 80 2e-15
07_03_1329 + 25844335-25845000 29 4.6
04_04_1310 - 32517074-32517193,32517295-32517360,32517468-325175... 28 8.0
01_06_0546 + 30124693-30124970,30125711-30125861,30125955-301261... 28 8.0
>06_03_1033 -
27035977-27036144,27036420-27036544,27036695-27036766,
27036872-27036976,27037513-27037567,27038196-27038276,
27039109-27039159,27039531-27039594,27040783-27040850,
27040993-27041079,27041401-27041655,27041768-27041890,
27042013-27042297,27042948-27043087,27043696-27043759,
27043929-27044048
Length = 620
Score = 135 bits (326), Expect = 5e-32
Identities = 72/187 (38%), Positives = 111/187 (59%)
Frame = +3
Query: 162 LQALRALMSSQRPVLAAYIIPTADAHNSEYIDAADARREWISAFTGSAGTAVVTSSQALV 341
L LRALM++ P L A ++P+ DAH SEY+ D RR+++S FTGSAG A++T +AL+
Sbjct: 14 LDELRALMAAHSPSLHALVVPSEDAHQSEYVSERDKRRQFVSGFTGSAGLALITMKEALL 73
Query: 342 WTDGRYYTQFEREVDLSAWTLMKQTLPDTPTLEKWLASNLKDGDVVGVDPQTMTRDEWTP 521
WTDGRY+ Q E+++ + W LM+ + + P +E W+A NL D V+G++P ++ D
Sbjct: 74 WTDGRYFLQAEQQL-TNRWKLMR--MGEDPPVEVWIADNLSDEAVIGINPWCISVDTAQR 130
Query: 522 IQTALKKISAQLVPISNNLVDDVRIELGDPAPKRSHNELAPLHVRYTGRTAGEKIAELRR 701
+ A K L +S++LVD E+ P + + V Y G + EK+ ELR
Sbjct: 131 YEHAFSKKHQTLFQLSSDLVD----EIWKDRPPVNALPVFVQPVEYAGCSVTEKLKELRE 186
Query: 702 KMVEKKA 722
K+ +KA
Sbjct: 187 KLQHEKA 193
Score = 29.5 bits (63), Expect = 3.5
Identities = 9/29 (31%), Positives = 20/29 (68%)
Frame = +1
Query: 715 KKLLPLVLTXLDDIAYTLNLRGSXIEYNP 801
+K +++ LD++A+ N+RG+ + Y+P
Sbjct: 191 EKARGIIIAALDEVAWLYNIRGNDVHYSP 219
>07_01_0747 -
5724586-5724648,5725229-5725309,5725564-5725656,
5725775-5725929,5726023-5726131,5726291-5726481,
5727463-5727614,5728453-5728728,5729415-5729587,
5730023-5730298,5730839-5730958,5731051-5731176,
5731629-5731970
Length = 718
Score = 125 bits (302), Expect = 4e-29
Identities = 68/192 (35%), Positives = 110/192 (57%), Gaps = 1/192 (0%)
Frame = +3
Query: 156 QRLQALRALMSSQRPVLAAYIIPTADAHNSEYIDAADARREWISAFTGSAGTAVVTSSQA 335
++L++LR L++ + AYI+P+ DAH SE+I RR +++ FTGSAGTAVVT +A
Sbjct: 86 EKLRSLRRLLARPDVAIDAYIVPSQDAHQSEFIAECFMRRAYLTGFTGSAGTAVVTKDKA 145
Query: 336 LVWTDGRYYTQFEREVDLSAWTLMKQTLPDTPTLEKWLASNLKDGDVVGVDPQTMTRDEW 515
+WTDGRY+ Q E+E+ WTLM+ PT +WL L G VG+DP + D
Sbjct: 146 ALWTDGRYFLQAEKELS-HDWTLMRSGNQGVPTTSEWLNEVLPSGCRVGIDPFLFSFDAA 204
Query: 516 TPIQTALKKISAQLVPISN-NLVDDVRIELGDPAPKRSHNELAPLHVRYTGRTAGEKIAE 692
++ A+ + + +LV I + NLVD++ G+ P+ + ++Y G K++
Sbjct: 205 EELKDAISEKNHELVLIKDLNLVDEI---WGESRPEPPKEQTRVHGIKYAGVDVPSKLSF 261
Query: 693 LRRKMVEKKASA 728
+R ++ E +A
Sbjct: 262 VRSQLAENGCNA 273
Score = 28.7 bits (61), Expect = 6.1
Identities = 10/24 (41%), Positives = 19/24 (79%)
Frame = +1
Query: 730 LVLTXLDDIAYTLNLRGSXIEYNP 801
+V++ LD++A+ LN+RGS + +P
Sbjct: 274 VVISLLDEVAWLLNMRGSDVPNSP 297
>11_05_0099 -
19044772-19044837,19044896-19045051,19045529-19045653,
19045773-19045844,19045947-19046051,19046509-19046563,
19047334-19047414,19047499-19047633,19048279-19048342,
19048844-19048911,19049082-19049168,19050247-19050501,
19050616-19050738,19050866-19051150,19051712-19051851,
19052385-19052445,19052537-19052637,19052807-19052870,
19053020-19053127
Length = 716
Score = 87.4 bits (207), Expect = 1e-17
Identities = 49/139 (35%), Positives = 76/139 (54%)
Frame = +3
Query: 306 GTAVVTSSQALVWTDGRYYTQFEREVDLSAWTLMKQTLPDTPTLEKWLASNLKDGDVVGV 485
G A++T +AL+WTDGRY+ Q E+++ W LM+ + + P +E W+A NL D VVG+
Sbjct: 112 GLALITMKEALLWTDGRYFLQAEQQLS-DRWKLMR--MGEDPPVEVWIADNLSDEAVVGI 168
Query: 486 DPQTMTRDEWTPIQTALKKISAQLVPISNNLVDDVRIELGDPAPKRSHNELAPLHVRYTG 665
+P ++ D + A K L +S++L+D E+ P + V Y G
Sbjct: 169 NPWCISVDTAQRYEHAFSKKHQTLFQLSSDLID----EIWKDRPSAEALPVFVQPVEYAG 224
Query: 666 RTAGEKIAELRRKMVEKKA 722
RT EK+ ELR K + +KA
Sbjct: 225 RTVTEKLKELREKFLHEKA 243
Score = 58.4 bits (135), Expect = 7e-09
Identities = 29/76 (38%), Positives = 42/76 (55%), Gaps = 2/76 (2%)
Frame = +3
Query: 162 LQALRALMSSQRPVLAAYIIPTADAHNSEYIDAADARREWISAFTGSAGTAV--VTSSQA 335
L LRALM++ P L A ++P+ DAH SEY+ D RR+++S FTGSA + V ++
Sbjct: 10 LDELRALMAAHSPPLHALVVPSEDAHQSEYVSERDKRRQFVSGFTGSADGTIGWVRVAEV 69
Query: 336 LVWTDGRYYTQFEREV 383
W Y + V
Sbjct: 70 GRWNGRHVYAMLAKVV 85
Score = 29.5 bits (63), Expect = 3.5
Identities = 9/33 (27%), Positives = 21/33 (63%)
Frame = +1
Query: 703 RWWRKKLLPLVLTXLDDIAYTLNLRGSXIEYNP 801
++ +K +++ LD++A+ N+RG + Y+P
Sbjct: 237 KFLHEKARGIIIAALDEVAWLYNIRGDDVHYSP 269
>11_05_0100 -
19056465-19056470,19057043-19057276,19058391-19058546,
19059639-19059763,19059912-19059983,19060080-19060184,
19060691-19060745,19061576-19061656,19062806-19062869,
19064715-19064782,19064947-19065033,19066121-19066285,
19066310-19066429,19066485-19066607,19066738-19067019,
19067936-19068075,19068234-19068335,19068802-19068874,
19069061-19069171
Length = 722
Score = 79.8 bits (188), Expect = 2e-15
Identities = 48/146 (32%), Positives = 80/146 (54%)
Frame = +3
Query: 285 SAFTGSAGTAVVTSSQALVWTDGRYYTQFEREVDLSAWTLMKQTLPDTPTLEKWLASNLK 464
+ FT G A++T +AL+WTDGRY+ Q E+++ W LM + + P +E W+A NL
Sbjct: 89 TTFTIWGGLALITMKEALLWTDGRYFLQAEKQLS-DHWELM--CMGEDPPVEVWIADNLS 145
Query: 465 DGDVVGVDPQTMTRDEWTPIQTALKKISAQLVPISNNLVDDVRIELGDPAPKRSHNELAP 644
D V+G++P ++ D + A K L +S++LVD+V D + + P
Sbjct: 146 DEAVIGINPWCISVDTAQRYEHAFSKKHQTLFQLSSDLVDEV---WKDRPLANTQPVVHP 202
Query: 645 LHVRYTGRTAGEKIAELRRKMVEKKA 722
V + G + K+ ELR+K++ +KA
Sbjct: 203 --VEFAGCSVTGKLKELRKKLLHEKA 226
Score = 55.2 bits (127), Expect = 6e-08
Identities = 26/53 (49%), Positives = 36/53 (67%)
Frame = +3
Query: 162 LQALRALMSSQRPVLAAYIIPTADAHNSEYIDAADARREWISAFTGSAGTAVV 320
L LRALM++ P L A ++P+ DAH SEY+ D R ++IS FTG A +AV+
Sbjct: 11 LDELRALMAAHSPPLHALVVPSDDAHQSEYVAERDKRLQFISGFTGIARSAVL 63
Score = 29.9 bits (64), Expect = 2.6
Identities = 13/35 (37%), Positives = 23/35 (65%), Gaps = 5/35 (14%)
Frame = +1
Query: 712 RKKLLP-----LVLTXLDDIAYTLNLRGSXIEYNP 801
RKKLL +++ LD++A+ N+RG+ + Y+P
Sbjct: 218 RKKLLHEKARGIIIAALDEVAWLYNIRGNDVHYSP 252
>07_03_1329 + 25844335-25845000
Length = 221
Score = 29.1 bits (62), Expect = 4.6
Identities = 22/82 (26%), Positives = 38/82 (46%)
Frame = +3
Query: 438 EKWLASNLKDGDVVGVDPQTMTRDEWTPIQTALKKISAQLVPISNNLVDDVRIELGDPAP 617
EK L+ +L+ + + +T + +K+ SA+L N++DD R + P P
Sbjct: 81 EKALSDDLEKVSLEAESARMITLESSDGEVVKVKEASARLSKTIGNIIDDGRGDEAIPLP 140
Query: 618 KRSHNELAPLHVRYTGRTAGEK 683
S+ L + V Y + A EK
Sbjct: 141 DVSYKTLKKV-VEYCDKHADEK 161
>04_04_1310 -
32517074-32517193,32517295-32517360,32517468-32517558,
32517741-32517870,32517944-32518032,32518300-32518376,
32518539-32518607,32518800-32518874,32519040-32519135,
32519232-32519396
Length = 325
Score = 28.3 bits (60), Expect = 8.0
Identities = 12/38 (31%), Positives = 21/38 (55%)
Frame = +3
Query: 201 VLAAYIIPTADAHNSEYIDAADARREWISAFTGSAGTA 314
++AA + PTA+ HN + AA R+W ++ +A
Sbjct: 3 IVAALVAPTANPHNPLRLIAAAPHRQWRRVAAAASSSA 40
>01_06_0546 +
30124693-30124970,30125711-30125861,30125955-30126137,
30126333-30126407,30126535-30126690,30126909-30127007,
30127075-30127205,30127690-30127771,30127846-30128199
Length = 502
Score = 28.3 bits (60), Expect = 8.0
Identities = 21/70 (30%), Positives = 33/70 (47%)
Frame = +3
Query: 204 LAAYIIPTADAHNSEYIDAADARREWISAFTGSAGTAVVTSSQALVWTDGRYYTQFEREV 383
+AA I+ T N+ YID ADA +W + S G V+ + T+F++E+
Sbjct: 248 IAAVILGTGS--NAAYIDHADAIPKWHGSLPKS-GNMVINMEWGNFKSSHLPLTEFDQEL 304
Query: 384 DLSAWTLMKQ 413
D + KQ
Sbjct: 305 DAESLNPGKQ 314
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,583,683
Number of Sequences: 37544
Number of extensions: 528160
Number of successful extensions: 1402
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1362
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1396
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2315199948
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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