Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP03_FL5_P01
(835 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY180919-1|AAN87272.1| 884|Drosophila melanogaster ORF1 protein. 107 2e-23
AF456125-1|AAL57609.1| 832|Drosophila melanogaster reverse tran... 107 2e-23
AF237761-2|AAF81411.1| 908|Drosophila melanogaster unknown prot... 87 3e-17
M17214-2|AAA28508.1| 858|Drosophila melanogaster protein ( D.me... 75 9e-14
AM040243-1|CAJ13339.1| 656|Drosophila melanogaster pol protein ... 75 9e-14
AM040242-2|CAJ13338.1| 1103|Drosophila melanogaster pol protein ... 75 9e-14
AJ542582-2|CAD65871.1| 1103|Drosophila melanogaster pol protein ... 75 9e-14
AJ542581-2|CAD65869.1| 1103|Drosophila melanogaster pol protein ... 75 9e-14
AY060438-1|AAL25477.1| 906|Drosophila melanogaster LD46618p pro... 75 1e-13
M22874-2|AAA28675.1| 916|Drosophila melanogaster protein ( D.me... 73 5e-13
AY089343-1|AAL90081.2| 718|Drosophila melanogaster AT16518p pro... 73 5e-13
U14101-2|AAC46494.1| 1084|Drosophila melanogaster putative rever... 70 3e-12
U02279-1|AAA18301.1| 964|Drosophila melanogaster protein ( Dros... 70 3e-12
AY600955-2|AAT12845.1| 1092|Drosophila melanogaster pol protein ... 70 3e-12
AY561850-2|AAS68534.1| 1080|Drosophila melanogaster pol protein ... 70 3e-12
AY035777-2|AAK77971.1| 1080|Drosophila melanogaster pol protein ... 70 3e-12
AM040245-1|CAJ13341.1| 1042|Drosophila melanogaster pol protein ... 70 3e-12
AJ566116-2|CAD92793.1| 1080|Drosophila melanogaster pol protein ... 70 3e-12
X17551-2|CAA35587.1| 888|Drosophila melanogaster protein ( D.me... 66 7e-11
AY047531-1|AAK77263.1| 888|Drosophila melanogaster GH03753p pro... 66 7e-11
AY060323-1|AAL25362.1| 241|Drosophila melanogaster GH20809p pro... 63 5e-10
AJ302712-2|CAC16871.1| 1227|Drosophila melanogaster pol protein. 54 2e-07
M14954-2|AAA70222.2| 1219|Drosophila melanogaster putative ORF2 ... 48 1e-05
X51968-2|CAA36227.1| 1021|Drosophila melanogaster protein ( Dros... 46 8e-05
AJ278684-2|CAB99192.1| 989|Drosophila melanogaster endonuclease... 42 8e-04
U14102-1|AAC46495.1| 299|Drosophila melanogaster putative rever... 38 0.017
AE014297-833|AAN13403.2| 1293|Drosophila melanogaster CG31349-PC... 33 0.64
AE014297-832|AAF54301.3| 2090|Drosophila melanogaster CG31349-PA... 33 0.64
AY071740-1|AAL49362.1| 184|Drosophila melanogaster RH47344p pro... 32 1.1
Y17918-1|CAA76938.1| 1441|Drosophila melanogaster CRAG protein p... 31 1.9
X51967-1|CAA36225.1| 1057|Drosophila melanogaster protein ( Dros... 31 1.9
BT010264-1|AAQ23582.1| 1238|Drosophila melanogaster RE27764p pro... 30 4.5
AE014296-3371|AAF51605.2| 1535|Drosophila melanogaster CG5195-PA... 30 4.5
DQ168463-1|AAZ81897.1| 1522|Drosophila melanogaster BBG-LP12 pro... 29 5.9
DQ168462-1|AAZ81896.1| 1842|Drosophila melanogaster PDZ domain-c... 29 5.9
BT011179-1|AAR88540.1| 1125|Drosophila melanogaster RE71243p pro... 29 5.9
BT010001-1|AAQ22470.1| 1088|Drosophila melanogaster RE31064p pro... 29 5.9
AY075159-1|AAL68029.1| 198|Drosophila melanogaster AT03803p pro... 29 5.9
AY071225-1|AAL48847.1| 1203|Drosophila melanogaster RE26660p pro... 29 5.9
AE014297-3297|AAF56113.2| 1088|Drosophila melanogaster CG4467-PA... 29 5.9
AE014297-3296|ABI31198.1| 1125|Drosophila melanogaster CG4467-PB... 29 5.9
AE014296-2385|AAF49738.1| 1552|Drosophila melanogaster CG9587-PA... 29 5.9
AE014296-982|AAF50759.1| 1203|Drosophila melanogaster CG5249-PA ... 29 5.9
AE013599-3578|AAF46985.1| 198|Drosophila melanogaster CG3500-PA... 29 5.9
DQ168451-1|AAZ81890.1| 356|Drosophila melanogaster BBG-LP12 pro... 29 7.8
>AY180919-1|AAN87272.1| 884|Drosophila melanogaster ORF1 protein.
Length = 884
Score = 107 bits (257), Expect = 2e-23
Identities = 55/164 (33%), Positives = 93/164 (56%)
Frame = +3
Query: 237 LFSLYINDIPRSPETHLALFADDTAIYYSCRKMSLLHRRLQIAVATLGQWFRKWRIDINP 416
LF+++ +DIP++ L+LFADD A+Y + S +++ +Q + L +++KW+I INP
Sbjct: 676 LFNIFTHDIPQATNCVLSLFADDAAVYSAGFSYSEINQSMQSYLNELDIYYKKWKIKINP 735
Query: 417 TKSAAVLFKRGRPPNITSGIPLRSRRANTSAVSPITLFGQPIPWVSKVKYLGVTLDRGMT 596
K+ A+ F + R P +P R R + PI WV ++YLG+ D+ +T
Sbjct: 736 NKTNAIFFTKRRKPRY---LPDRQLR----------ILDSPIQWVDNIRYLGIIFDKKLT 782
Query: 597 FRPHIKTVRDRAAFILGRLYPMLCSRSKLSLRNKVTLYKTCIRP 728
F+ HI + I+ LYP++ +SKLS+ NK+ ++KT P
Sbjct: 783 FKYHINNTIMKVNKIICTLYPLINRKSKLSISNKIIIFKTIFNP 826
Score = 72.5 bits (170), Expect = 6e-13
Identities = 33/73 (45%), Positives = 48/73 (65%)
Frame = +2
Query: 20 GALFFDIAKAFDKVWHNGLIYKLYNMGVPDRLVLIIRDFLSNRSFRYRVEGTRSRPRQLT 199
G + DI AFD VWH+GL++KL +G P L+ I+++FL++R F + ++S R L
Sbjct: 604 GLVTLDIEAAFDTVWHDGLLHKLKMIGTPIYLIKIVQNFLTHRYFSVNLNSSQSARRILN 663
Query: 200 AGVPQGSALSPXI 238
AGVPQGS L P +
Sbjct: 664 AGVPQGSVLGPTL 676
>AF456125-1|AAL57609.1| 832|Drosophila melanogaster reverse
transcriptase protein.
Length = 832
Score = 107 bits (257), Expect = 2e-23
Identities = 55/164 (33%), Positives = 93/164 (56%)
Frame = +3
Query: 237 LFSLYINDIPRSPETHLALFADDTAIYYSCRKMSLLHRRLQIAVATLGQWFRKWRIDINP 416
LF+++ +DIP++ L+LFADD A+Y + S +++ +Q + L +++KW+I INP
Sbjct: 624 LFNIFTHDIPQATNCVLSLFADDAAVYSAGFSYSEINQSMQSYLNELDIYYKKWKIKINP 683
Query: 417 TKSAAVLFKRGRPPNITSGIPLRSRRANTSAVSPITLFGQPIPWVSKVKYLGVTLDRGMT 596
K+ A+ F + R P +P R R + PI WV ++YLG+ D+ +T
Sbjct: 684 NKTNAIFFTKRRKPRY---LPDRQLR----------ILDSPIQWVDNIRYLGIIFDKKLT 730
Query: 597 FRPHIKTVRDRAAFILGRLYPMLCSRSKLSLRNKVTLYKTCIRP 728
F+ HI + I+ LYP++ +SKLS+ NK+ ++KT P
Sbjct: 731 FKYHINNTIMKVNKIICTLYPLINRKSKLSISNKIIIFKTIFNP 774
Score = 72.5 bits (170), Expect = 6e-13
Identities = 33/73 (45%), Positives = 48/73 (65%)
Frame = +2
Query: 20 GALFFDIAKAFDKVWHNGLIYKLYNMGVPDRLVLIIRDFLSNRSFRYRVEGTRSRPRQLT 199
G + DI AFD VWH+GL++KL +G P L+ I+++FL++R F + ++S R L
Sbjct: 552 GLVTLDIEAAFDTVWHDGLLHKLKMIGTPIYLIKIVQNFLTHRYFSVNLNSSQSARRILN 611
Query: 200 AGVPQGSALSPXI 238
AGVPQGS L P +
Sbjct: 612 AGVPQGSVLGPTL 624
>AF237761-2|AAF81411.1| 908|Drosophila melanogaster unknown protein.
Length = 908
Score = 87.0 bits (206), Expect = 3e-17
Identities = 60/172 (34%), Positives = 84/172 (48%), Gaps = 7/172 (4%)
Frame = +3
Query: 234 LLFSLYINDIPRSP-----ETHLALFADDTAIYYSCRKMSLLHRRLQIAVATLGQWFRKW 398
LL+ LY +D+P+ ++ LA FADD + Y R +Q +W R+W
Sbjct: 649 LLYCLYSHDMPQPDVSLYGKSMLATFADDVCVTYRSRCEHDAADGIQDFAYRFSEWARRW 708
Query: 399 RIDINPTKSAAVLF--KRGRPPNITSGIPLRSRRANTSAVSPITLFGQPIPWVSKVKYLG 572
I IN +KS V F KR PP P+ + P+P + KYLG
Sbjct: 709 NIGINSSKSNNVCFTLKRRTPP-------------------PVYIEEVPVPQPNAAKYLG 749
Query: 573 VTLDRGMTFRPHIKTVRDRAAFILGRLYPMLCSRSKLSLRNKVTLYKTCIRP 728
V LDR +TF H+ +R R + + Y +L SRSKLSL NK+T+YK + P
Sbjct: 750 VLLDRRLTFSKHVTDIRTRLRAKVAKHYWLLSSRSKLSLSNKLTIYKQILAP 801
Score = 56.4 bits (130), Expect = 5e-08
Identities = 28/72 (38%), Positives = 39/72 (54%)
Frame = +2
Query: 23 ALFFDIAKAFDKVWHNGLIYKLYNMGVPDRLVLIIRDFLSNRSFRYRVEGTRSRPRQLTA 202
+LF DI +AFD+VWH GL K+ +P +++ +L R F R S + A
Sbjct: 580 SLFLDIREAFDRVWHIGLQLKI-KQTLPAPYFGLLKSYLEGRRFAVRFHSAISTEHNVAA 638
Query: 203 GVPQGSALSPXI 238
GVPQGS L P +
Sbjct: 639 GVPQGSVLGPLL 650
>M17214-2|AAA28508.1| 858|Drosophila melanogaster protein (
D.melanogaster Fw repetitiveelement putative reverse
transcriptase, complete cds,and putative binding protein,
3' end. ).
Length = 858
Score = 75.4 bits (177), Expect = 9e-14
Identities = 50/164 (30%), Positives = 76/164 (46%)
Frame = +3
Query: 237 LFSLYINDIPRSPETHLALFADDTAIYYSCRKMSLLHRRLQIAVATLGQWFRKWRIDINP 416
L+ +Y DIP + ++ FADDTAI R +L + + + +W WRI +N
Sbjct: 648 LYLIYTADIPTNSRLTVSTFADDTAILSRSRSPIQATAQLALYLIDIKKWLSDWRIKVNE 707
Query: 417 TKSAAVLFKRGRPPNITSGIPLRSRRANTSAVSPITLFGQPIPWVSKVKYLGVTLDRGMT 596
K V F N P+ L P+P +V YLGV LDR +T
Sbjct: 708 QKCKHVTFT-----------------LNRQDCPPLLLNSIPLPKADEVTYLGVHLDRRLT 750
Query: 597 FRPHIKTVRDRAAFILGRLYPMLCSRSKLSLRNKVTLYKTCIRP 728
+R HI+ + + L+ ++ S S LSL +KV LY + ++P
Sbjct: 751 WRRHIEAKKTQLKLKANNLHWLINSGSPLSLDHKVLLYNSILKP 794
Score = 60.9 bits (141), Expect = 2e-09
Identities = 27/72 (37%), Positives = 45/72 (62%)
Frame = +2
Query: 23 ALFFDIAKAFDKVWHNGLIYKLYNMGVPDRLVLIIRDFLSNRSFRYRVEGTRSRPRQLTA 202
A+F D+++AFDKVW +GL++K+ + +P+ +++ +L +R F R S + A
Sbjct: 578 AVFLDVSQAFDKVWLDGLMFKI-KISLPESTHKLLKSYLYDRKFAVRCNTATSTVHTIEA 636
Query: 203 GVPQGSALSPXI 238
GVPQGS L P +
Sbjct: 637 GVPQGSVLGPTL 648
>AM040243-1|CAJ13339.1| 656|Drosophila melanogaster pol protein
protein.
Length = 656
Score = 75.4 bits (177), Expect = 9e-14
Identities = 36/73 (49%), Positives = 51/73 (69%), Gaps = 1/73 (1%)
Frame = +2
Query: 23 ALFFDIAKAFDKVWHNGLIYKLYNMGVPDRLVLIIRDFLSNRSFRYRVEG-TRSRPRQLT 199
A F DI +AFD+VWH+GL+YKL + +P L ++ ++LSNR+F R++G T SR +
Sbjct: 181 ATFLDITEAFDRVWHDGLLYKLSRL-IPRYLFDLLENYLSNRTFSVRIDGETTSRIGNIR 239
Query: 200 AGVPQGSALSPXI 238
AGVPQGS L P +
Sbjct: 240 AGVPQGSILGPVL 252
Score = 54.4 bits (125), Expect = 2e-07
Identities = 39/148 (26%), Positives = 66/148 (44%)
Frame = +3
Query: 285 LALFADDTAIYYSCRKMSLLHRRLQIAVATLGQWFRKWRIDINPTKSAAVLFKRGRPPNI 464
LA +ADDT I + L Q + +W +KW I IN K+ +LF
Sbjct: 284 LATYADDTIILSRSKYTKLAINLNQNYLNVFCRWSKKWDIAINAKKTGHILFSL------ 337
Query: 465 TSGIPLRSRRANTSAVSPITLFGQPIPWVSKVKYLGVTLDRGMTFRPHIKTVRDRAAFIL 644
++ T+ +P + GQ ++K +YLG+ LDR +TF H+ ++ +
Sbjct: 338 --------KKEQTNIYTPPLINGQRAAKLNKQRYLGLMLDRRLTFCAHMTLLKGKTIAAY 389
Query: 645 GRLYPMLCSRSKLSLRNKVTLYKTCIRP 728
+L ++ S L K+ L+K + P
Sbjct: 390 KKLEWLIGKNSHLPKNAKILLWKQIVSP 417
>AM040242-2|CAJ13338.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 75.4 bits (177), Expect = 9e-14
Identities = 36/73 (49%), Positives = 51/73 (69%), Gaps = 1/73 (1%)
Frame = +2
Query: 23 ALFFDIAKAFDKVWHNGLIYKLYNMGVPDRLVLIIRDFLSNRSFRYRVEG-TRSRPRQLT 199
A F DI +AFD+VWH+GL+YKL + +P L ++ ++LSNR+F R++G T SR +
Sbjct: 628 ATFLDITEAFDRVWHDGLLYKLSRL-IPRYLFDLLENYLSNRTFSVRIDGETTSRIGNIR 686
Query: 200 AGVPQGSALSPXI 238
AGVPQGS L P +
Sbjct: 687 AGVPQGSILGPVL 699
Score = 54.4 bits (125), Expect = 2e-07
Identities = 39/148 (26%), Positives = 66/148 (44%)
Frame = +3
Query: 285 LALFADDTAIYYSCRKMSLLHRRLQIAVATLGQWFRKWRIDINPTKSAAVLFKRGRPPNI 464
LA +ADDT I + L Q + +W +KW I IN K+ +LF
Sbjct: 731 LATYADDTIILSRSKYTKLAINLNQNYLNVFCRWSKKWDIAINAKKTGHILFSL------ 784
Query: 465 TSGIPLRSRRANTSAVSPITLFGQPIPWVSKVKYLGVTLDRGMTFRPHIKTVRDRAAFIL 644
++ T+ +P + GQ ++K +YLG+ LDR +TF H+ ++ +
Sbjct: 785 --------KKEQTNIYTPPLINGQRAAKLNKQRYLGLMLDRRLTFCAHMTLLKGKTIAAY 836
Query: 645 GRLYPMLCSRSKLSLRNKVTLYKTCIRP 728
+L ++ S L K+ L+K + P
Sbjct: 837 KKLEWLIGKNSHLPKNAKILLWKQIVSP 864
>AJ542582-2|CAD65871.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 75.4 bits (177), Expect = 9e-14
Identities = 36/73 (49%), Positives = 51/73 (69%), Gaps = 1/73 (1%)
Frame = +2
Query: 23 ALFFDIAKAFDKVWHNGLIYKLYNMGVPDRLVLIIRDFLSNRSFRYRVEG-TRSRPRQLT 199
A F DI +AFD+VWH+GL+YKL + +P L ++ ++LSNR+F R++G T SR +
Sbjct: 628 ATFLDITEAFDRVWHDGLLYKLSRL-IPRYLFDLLENYLSNRTFSVRIDGETTSRIGNIR 686
Query: 200 AGVPQGSALSPXI 238
AGVPQGS L P +
Sbjct: 687 AGVPQGSILGPVL 699
Score = 54.4 bits (125), Expect = 2e-07
Identities = 39/148 (26%), Positives = 66/148 (44%)
Frame = +3
Query: 285 LALFADDTAIYYSCRKMSLLHRRLQIAVATLGQWFRKWRIDINPTKSAAVLFKRGRPPNI 464
LA +ADDT I + L Q + +W +KW I IN K+ +LF
Sbjct: 731 LATYADDTIILSRSKYTKLAINLNQNYLNVFCRWSKKWDIAINAKKTGHILFSL------ 784
Query: 465 TSGIPLRSRRANTSAVSPITLFGQPIPWVSKVKYLGVTLDRGMTFRPHIKTVRDRAAFIL 644
++ T+ +P + GQ ++K +YLG+ LDR +TF H+ ++ +
Sbjct: 785 --------KKEQTNIYTPPLINGQRAAKLNKQRYLGLMLDRRLTFCAHMTLLKGKTIAAY 836
Query: 645 GRLYPMLCSRSKLSLRNKVTLYKTCIRP 728
+L ++ S L K+ L+K + P
Sbjct: 837 KKLEWLIGKNSHLPKNAKILLWKQIVSP 864
>AJ542581-2|CAD65869.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 75.4 bits (177), Expect = 9e-14
Identities = 36/73 (49%), Positives = 51/73 (69%), Gaps = 1/73 (1%)
Frame = +2
Query: 23 ALFFDIAKAFDKVWHNGLIYKLYNMGVPDRLVLIIRDFLSNRSFRYRVEG-TRSRPRQLT 199
A F DI +AFD+VWH+GL+YKL + +P L ++ ++LSNR+F R++G T SR +
Sbjct: 628 ATFLDITEAFDRVWHDGLLYKLSRL-IPRYLFDLLENYLSNRTFSVRIDGETTSRIGNIR 686
Query: 200 AGVPQGSALSPXI 238
AGVPQGS L P +
Sbjct: 687 AGVPQGSILGPVL 699
Score = 54.4 bits (125), Expect = 2e-07
Identities = 39/148 (26%), Positives = 66/148 (44%)
Frame = +3
Query: 285 LALFADDTAIYYSCRKMSLLHRRLQIAVATLGQWFRKWRIDINPTKSAAVLFKRGRPPNI 464
LA +ADDT I + L Q + +W +KW I IN K+ +LF
Sbjct: 731 LATYADDTIILSRSKYTKLAINLNQNYLNVFCRWSKKWDIAINAKKTGHILFSL------ 784
Query: 465 TSGIPLRSRRANTSAVSPITLFGQPIPWVSKVKYLGVTLDRGMTFRPHIKTVRDRAAFIL 644
++ T+ +P + GQ ++K +YLG+ LDR +TF H+ ++ +
Sbjct: 785 --------KKEQTNIYTPPLINGQRAAKLNKQRYLGLMLDRRLTFCAHMTLLKGKTIAAY 836
Query: 645 GRLYPMLCSRSKLSLRNKVTLYKTCIRP 728
+L ++ S L K+ L+K + P
Sbjct: 837 KKLEWLIGKNSHLPKNAKILLWKQIVSP 864
>AY060438-1|AAL25477.1| 906|Drosophila melanogaster LD46618p protein.
Length = 906
Score = 74.9 bits (176), Expect = 1e-13
Identities = 52/173 (30%), Positives = 83/173 (47%), Gaps = 8/173 (4%)
Frame = +3
Query: 234 LLFSLYINDIPRSPETH--------LALFADDTAIYYSCRKMSLLHRRLQIAVATLGQWF 389
LL+S++ D+P H LA +ADD A+ YS + R LQ + TL W
Sbjct: 650 LLYSVFTADLPCPNAYHMADPRKALLATYADDIALLYSSNCCNEAARGLQEYLTTLAAWC 709
Query: 390 RKWRIDINPTKSAAVLFKRGRPPNITSGIPLRSRRANTSAVSPITLFGQPIPWVSKVKYL 569
++W + +NP K+ P + + + +PI L G + S+ KYL
Sbjct: 710 KRWILKVNPQKTIN---------------PCFTLKTLSPVTAPIELEGVILDQPSQAKYL 754
Query: 570 GVTLDRGMTFRPHIKTVRDRAAFILGRLYPMLCSRSKLSLRNKVTLYKTCIRP 728
G+TLD+ +TF PH+K R + +L +L +S ++LR K +Y C+ P
Sbjct: 755 GITLDKRLTFGPHLKATTRRCYQRMQQLRWLLNRKSTMTLRAKRAVYVHCVAP 807
Score = 66.1 bits (154), Expect = 6e-11
Identities = 31/72 (43%), Positives = 46/72 (63%)
Frame = +2
Query: 23 ALFFDIAKAFDKVWHNGLIYKLYNMGVPDRLVLIIRDFLSNRSFRYRVEGTRSRPRQLTA 202
A+F D+ +AFD+VWH+GLI K+ + P +++ +L +R F RV + S PR + A
Sbjct: 581 AVFIDMQQAFDRVWHDGLISKVKKL-FPAPYYGVLKSYLEDRRFMVRVRNSYSIPRVMRA 639
Query: 203 GVPQGSALSPXI 238
GVPQGS L P +
Sbjct: 640 GVPQGSVLGPLL 651
>M22874-2|AAA28675.1| 916|Drosophila melanogaster protein (
D.melanogaster LINEelement J-1, clone J-1. ).
Length = 916
Score = 72.9 bits (171), Expect = 5e-13
Identities = 32/70 (45%), Positives = 46/70 (65%)
Frame = +2
Query: 29 FFDIAKAFDKVWHNGLIYKLYNMGVPDRLVLIIRDFLSNRSFRYRVEGTRSRPRQLTAGV 208
F DI +AFD+VWH GL+YK + P +L L+++ FL R+F V+G +S + + AGV
Sbjct: 584 FLDIQQAFDRVWHPGLLYKAKRL-FPPQLYLVVKSFLEERTFHVSVDGYKSSIKPIAAGV 642
Query: 209 PQGSALSPXI 238
PQGS L P +
Sbjct: 643 PQGSVLGPTL 652
Score = 67.7 bits (158), Expect = 2e-11
Identities = 52/172 (30%), Positives = 80/172 (46%), Gaps = 8/172 (4%)
Frame = +3
Query: 237 LFSLYINDIP-RSPETH-------LALFADDTAIYYSCRKMSLLHRRLQIAVATLGQWFR 392
L+S++ +D+P +P T +A +ADDTA+ + + LQ + QW
Sbjct: 652 LYSVFASDMPTHTPVTEVDEEDVLIATYADDTAVLTKSKSILAATSGLQEYLDAFQQWAE 711
Query: 393 KWRIDINPTKSAAVLFKRGRPPNITSGIPLRSRRANTSAVSPITLFGQPIPWVSKVKYLG 572
W + IN K A V F N T P ++L G+ I KYLG
Sbjct: 712 NWNVRINAEKCANVTFA-----NRTGSCP------------GVSLNGRLIRHHQAYKYLG 754
Query: 573 VTLDRGMTFRPHIKTVRDRAAFILGRLYPMLCSRSKLSLRNKVTLYKTCIRP 728
+TLDR +TF HI ++ + R+ ++ R+KLSL KV +YK+ + P
Sbjct: 755 ITLDRKLTFSRHITNIQQAFRTKVARMSWLIAPRNKLSLGCKVNIYKSILAP 806
>AY089343-1|AAL90081.2| 718|Drosophila melanogaster AT16518p
protein.
Length = 718
Score = 72.9 bits (171), Expect = 5e-13
Identities = 32/70 (45%), Positives = 46/70 (65%)
Frame = +2
Query: 29 FFDIAKAFDKVWHNGLIYKLYNMGVPDRLVLIIRDFLSNRSFRYRVEGTRSRPRQLTAGV 208
F DI +AFD+VWH GL+YK + P +L L+++ FL R+F V+G +S + + AGV
Sbjct: 386 FLDIQQAFDRVWHPGLLYKAKRL-FPPQLYLVVKSFLEERTFHVSVDGYKSSIKPIAAGV 444
Query: 209 PQGSALSPXI 238
PQGS L P +
Sbjct: 445 PQGSVLGPTL 454
Score = 67.7 bits (158), Expect = 2e-11
Identities = 52/172 (30%), Positives = 80/172 (46%), Gaps = 8/172 (4%)
Frame = +3
Query: 237 LFSLYINDIP-RSPETH-------LALFADDTAIYYSCRKMSLLHRRLQIAVATLGQWFR 392
L+S++ +D+P +P T +A +ADDTA+ + + LQ + QW
Sbjct: 454 LYSVFASDMPTHTPVTEVDEEDVLIATYADDTAVLTKSKSILAATSGLQEYLDAFQQWAE 513
Query: 393 KWRIDINPTKSAAVLFKRGRPPNITSGIPLRSRRANTSAVSPITLFGQPIPWVSKVKYLG 572
W + IN K A V F N T P ++L G+ I KYLG
Sbjct: 514 NWNVRINAEKCANVTFA-----NRTGSCP------------GVSLNGRLIRHHQAYKYLG 556
Query: 573 VTLDRGMTFRPHIKTVRDRAAFILGRLYPMLCSRSKLSLRNKVTLYKTCIRP 728
+TLDR +TF HI ++ + R+ ++ R+KLSL KV +YK+ + P
Sbjct: 557 ITLDRKLTFSRHITNIQQAFRTKVARMSWLIAPRNKLSLGCKVNIYKSILAP 608
>U14101-2|AAC46494.1| 1084|Drosophila melanogaster putative reverse
transcriptase protein.
Length = 1084
Score = 70.1 bits (164), Expect = 3e-12
Identities = 34/73 (46%), Positives = 50/73 (68%), Gaps = 1/73 (1%)
Frame = +2
Query: 23 ALFFDIAKAFDKVWHNGLIYKLYNMGVPDRLVLIIRDFLSNRSFRYRVE-GTRSRPRQLT 199
A+F DI++AFD+VWH GL+ KL + +P L +I+ +L+NR+F + + G SR Q+
Sbjct: 625 AVFLDISEAFDRVWHEGLLLKLAKI-LPYNLYIILESYLTNRTFEVKDQAGETSRTGQIG 683
Query: 200 AGVPQGSALSPXI 238
AGVPQGS L P +
Sbjct: 684 AGVPQGSNLGPLL 696
Score = 54.4 bits (125), Expect = 2e-07
Identities = 44/173 (25%), Positives = 79/173 (45%), Gaps = 8/173 (4%)
Frame = +3
Query: 234 LLFSLYINDIPR------SPETHLAL--FADDTAIYYSCRKMSLLHRRLQIAVATLGQWF 389
LL+S++ +D+P SP + L +ADDT + S + R + + + W
Sbjct: 695 LLYSIFSSDMPLPYIYRPSPTERIMLSTYADDTIVLSSDTLATAATRNNENYLKSFSDWA 754
Query: 390 RKWRIDINPTKSAAVLFKRGRPPNITSGIPLRSRRANTSAVSPITLFGQPIPWVSKVKYL 569
KW I +N K+ V+F + + +P +++ + + GQ I SK YL
Sbjct: 755 DKWGISVNAAKTGHVIF------TLKNDLP--------TSLRTMKIKGQVIKIESKQSYL 800
Query: 570 GVTLDRGMTFRPHIKTVRDRAAFILGRLYPMLCSRSKLSLRNKVTLYKTCIRP 728
GV LD +T H+ + + ++ +L RSKL + K+ + K+ + P
Sbjct: 801 GVILDSKLTLSSHVTKLMGKYTTAYRKMTWILNRRSKLPTKTKMLILKSVLSP 853
>U02279-1|AAA18301.1| 964|Drosophila melanogaster protein (
Drosophila melanogastertelomere-associated transposons
TART, TART-A and HeT-A,and TART-A ORF2 gene, partial
cds. ).
Length = 964
Score = 70.1 bits (164), Expect = 3e-12
Identities = 34/73 (46%), Positives = 50/73 (68%), Gaps = 1/73 (1%)
Frame = +2
Query: 23 ALFFDIAKAFDKVWHNGLIYKLYNMGVPDRLVLIIRDFLSNRSFRYRVE-GTRSRPRQLT 199
A+F DI++AFD+VWH GL+ KL + +P L +I+ +L+NR+F + + G SR Q+
Sbjct: 509 AVFLDISEAFDRVWHEGLLLKLAKI-LPYNLYIILESYLTNRTFEVKDQAGETSRAGQIG 567
Query: 200 AGVPQGSALSPXI 238
AGVPQGS L P +
Sbjct: 568 AGVPQGSNLGPIL 580
Score = 56.4 bits (130), Expect = 5e-08
Identities = 46/173 (26%), Positives = 77/173 (44%), Gaps = 8/173 (4%)
Frame = +3
Query: 234 LLFSLYINDIPR------SPETHLAL--FADDTAIYYSCRKMSLLHRRLQIAVATLGQWF 389
+L+S++ +D+P SP + L +ADDT + S + R + + T W
Sbjct: 579 ILYSIFSSDMPLPHIYHPSPTERIMLSTYADDTIVLSSDILATAATRNNENYLKTFSDWA 638
Query: 390 RKWRIDINPTKSAAVLFKRGRPPNITSGIPLRSRRANTSAVSPITLFGQPIPWVSKVKYL 569
KW I +N K+ V++ + + IP + + + GQ I SK YL
Sbjct: 639 DKWGISVNAAKTGHVIY------TLKNDIPTN--------LKTMKIKGQAIKKESKQSYL 684
Query: 570 GVTLDRGMTFRPHIKTVRDRAAFILGRLYPMLCSRSKLSLRNKVTLYKTCIRP 728
GV LD +T PH+ V + ++ +L RSKL K+ + K+ + P
Sbjct: 685 GVILDSKLTLSPHVTKVVGKYLTAYRKMSWILNERSKLPTNTKMLILKSVLSP 737
>AY600955-2|AAT12845.1| 1092|Drosophila melanogaster pol protein
protein.
Length = 1092
Score = 70.1 bits (164), Expect = 3e-12
Identities = 34/73 (46%), Positives = 50/73 (68%), Gaps = 1/73 (1%)
Frame = +2
Query: 23 ALFFDIAKAFDKVWHNGLIYKLYNMGVPDRLVLIIRDFLSNRSFRYRVE-GTRSRPRQLT 199
A+F DI++AFD+VWH GL+ KL + +P L +I+ +L+NR+F + + G SR Q+
Sbjct: 637 AVFLDISEAFDRVWHEGLLLKLAKI-LPYNLYIILESYLTNRTFEVKDQAGETSRTGQIG 695
Query: 200 AGVPQGSALSPXI 238
AGVPQGS L P +
Sbjct: 696 AGVPQGSNLGPLL 708
Score = 62.1 bits (144), Expect = 9e-10
Identities = 48/173 (27%), Positives = 79/173 (45%), Gaps = 8/173 (4%)
Frame = +3
Query: 234 LLFSLYINDIPR------SPETHLAL--FADDTAIYYSCRKMSLLHRRLQIAVATLGQWF 389
LL+S++ +D+P SP + L +ADDT + S + R + + T W
Sbjct: 707 LLYSIFSSDMPLPYIYRPSPTQRIMLSTYADDTIVLSSDTLATAATRNNENYLKTFSDWA 766
Query: 390 RKWRIDINPTKSAAVLFKRGRPPNITSGIPLRSRRANTSAVSPITLFGQPIPWVSKVKYL 569
KW I +N K+ V+F + + +P S + + GQ I SK YL
Sbjct: 767 DKWGISVNAAKTGHVIF------TLKNDLPTNSMN--------VKIKGQTIKKESKQSYL 812
Query: 570 GVTLDRGMTFRPHIKTVRDRAAFILGRLYPMLCSRSKLSLRNKVTLYKTCIRP 728
GVTLD +T H+ + + + +L +L RSKL + K+ + K+ + P
Sbjct: 813 GVTLDSKLTLSSHVTKLLGKYSTAYRKLTWILNGRSKLPTKTKILILKSVLSP 865
>AY561850-2|AAS68534.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 70.1 bits (164), Expect = 3e-12
Identities = 34/73 (46%), Positives = 50/73 (68%), Gaps = 1/73 (1%)
Frame = +2
Query: 23 ALFFDIAKAFDKVWHNGLIYKLYNMGVPDRLVLIIRDFLSNRSFRYRVE-GTRSRPRQLT 199
A+F DI++AFD+VWH GL+ KL + +P L +I+ +L+NR+F + + G SR Q+
Sbjct: 625 AVFLDISEAFDRVWHEGLLLKLAKI-LPYNLYIILESYLTNRTFEVKDQAGETSRAGQIG 683
Query: 200 AGVPQGSALSPXI 238
AGVPQGS L P +
Sbjct: 684 AGVPQGSNLGPIL 696
Score = 56.4 bits (130), Expect = 5e-08
Identities = 46/173 (26%), Positives = 77/173 (44%), Gaps = 8/173 (4%)
Frame = +3
Query: 234 LLFSLYINDIPR------SPETHLAL--FADDTAIYYSCRKMSLLHRRLQIAVATLGQWF 389
+L+S++ +D+P SP + L +ADDT + S + R + + T W
Sbjct: 695 ILYSIFSSDMPLPHIYHPSPTERIMLSTYADDTIVLSSDILATAATRNNENYLKTFSDWA 754
Query: 390 RKWRIDINPTKSAAVLFKRGRPPNITSGIPLRSRRANTSAVSPITLFGQPIPWVSKVKYL 569
KW I +N K+ V++ + + IP + + + GQ I SK YL
Sbjct: 755 DKWGISVNAAKTGHVIY------TLKNDIPTN--------LKTMKIKGQAIKKESKQSYL 800
Query: 570 GVTLDRGMTFRPHIKTVRDRAAFILGRLYPMLCSRSKLSLRNKVTLYKTCIRP 728
GV LD +T PH+ V + ++ +L RSKL K+ + K+ + P
Sbjct: 801 GVILDSKLTLSPHVTKVVGKYLTAYRKMSWILNERSKLPTNTKMLILKSVLSP 853
>AY035777-2|AAK77971.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 70.1 bits (164), Expect = 3e-12
Identities = 34/73 (46%), Positives = 50/73 (68%), Gaps = 1/73 (1%)
Frame = +2
Query: 23 ALFFDIAKAFDKVWHNGLIYKLYNMGVPDRLVLIIRDFLSNRSFRYRVE-GTRSRPRQLT 199
A+F DI++AFD+VWH GL+ KL + +P L +I+ +L+NR+F + + G SR Q+
Sbjct: 625 AVFLDISEAFDRVWHEGLLLKLAKI-LPYNLYIILESYLTNRTFEVKDQAGETSRAGQIG 683
Query: 200 AGVPQGSALSPXI 238
AGVPQGS L P +
Sbjct: 684 AGVPQGSNLGPIL 696
Score = 56.4 bits (130), Expect = 5e-08
Identities = 46/173 (26%), Positives = 77/173 (44%), Gaps = 8/173 (4%)
Frame = +3
Query: 234 LLFSLYINDIPR------SPETHLAL--FADDTAIYYSCRKMSLLHRRLQIAVATLGQWF 389
+L+S++ +D+P SP + L +ADDT + S + R + + T W
Sbjct: 695 ILYSIFSSDMPLPHIYHPSPTERIMLSTYADDTIVLSSDILATAATRNNENYLKTFSDWA 754
Query: 390 RKWRIDINPTKSAAVLFKRGRPPNITSGIPLRSRRANTSAVSPITLFGQPIPWVSKVKYL 569
KW I +N K+ V++ + + IP + + + GQ I SK YL
Sbjct: 755 DKWGISVNAAKTGHVIY------TLKNDIPTN--------LKTMKIKGQAIKKESKQSYL 800
Query: 570 GVTLDRGMTFRPHIKTVRDRAAFILGRLYPMLCSRSKLSLRNKVTLYKTCIRP 728
GV LD +T PH+ V + ++ +L RSKL K+ + K+ + P
Sbjct: 801 GVILDSKLTLSPHVTKVVGKYLTAYRKMSWILNERSKLPTNTKMLILKSVLSP 853
>AM040245-1|CAJ13341.1| 1042|Drosophila melanogaster pol protein
protein.
Length = 1042
Score = 70.1 bits (164), Expect = 3e-12
Identities = 34/73 (46%), Positives = 50/73 (68%), Gaps = 1/73 (1%)
Frame = +2
Query: 23 ALFFDIAKAFDKVWHNGLIYKLYNMGVPDRLVLIIRDFLSNRSFRYRVE-GTRSRPRQLT 199
A+F DI++AFD+VWH GL+ KL + +P L +I+ +L+NR+F + + G SR Q+
Sbjct: 587 AVFLDISEAFDRVWHEGLLLKLAKI-LPYNLYIILESYLTNRTFEVKDQAGETSRAGQIG 645
Query: 200 AGVPQGSALSPXI 238
AGVPQGS L P +
Sbjct: 646 AGVPQGSNLGPIL 658
Score = 56.4 bits (130), Expect = 5e-08
Identities = 46/173 (26%), Positives = 77/173 (44%), Gaps = 8/173 (4%)
Frame = +3
Query: 234 LLFSLYINDIPR------SPETHLAL--FADDTAIYYSCRKMSLLHRRLQIAVATLGQWF 389
+L+S++ +D+P SP + L +ADDT + S + R + + T W
Sbjct: 657 ILYSIFSSDMPLPHIYHPSPTERIMLSTYADDTIVLSSDILATAATRNNENYLKTFSDWA 716
Query: 390 RKWRIDINPTKSAAVLFKRGRPPNITSGIPLRSRRANTSAVSPITLFGQPIPWVSKVKYL 569
KW I +N K+ V++ + + IP + + + GQ I SK YL
Sbjct: 717 DKWGISVNAAKTGHVIY------TLKNDIPTN--------LKTMKIKGQAIKKESKQSYL 762
Query: 570 GVTLDRGMTFRPHIKTVRDRAAFILGRLYPMLCSRSKLSLRNKVTLYKTCIRP 728
GV LD +T PH+ V + ++ +L RSKL K+ + K+ + P
Sbjct: 763 GVILDSKLTLSPHVTKVVGKYLTAYRKMSWILNERSKLPTNTKMLILKSVLSP 815
>AJ566116-2|CAD92793.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 70.1 bits (164), Expect = 3e-12
Identities = 34/73 (46%), Positives = 50/73 (68%), Gaps = 1/73 (1%)
Frame = +2
Query: 23 ALFFDIAKAFDKVWHNGLIYKLYNMGVPDRLVLIIRDFLSNRSFRYRVE-GTRSRPRQLT 199
A+F DI++AFD+VWH GL+ KL + +P L +I+ +L+NR+F + + G SR Q+
Sbjct: 625 AVFLDISEAFDRVWHEGLLLKLAKI-LPYNLYIILESYLTNRTFEVKDQAGETSRAGQIG 683
Query: 200 AGVPQGSALSPXI 238
AGVPQGS L P +
Sbjct: 684 AGVPQGSNLGPIL 696
Score = 56.4 bits (130), Expect = 5e-08
Identities = 46/173 (26%), Positives = 77/173 (44%), Gaps = 8/173 (4%)
Frame = +3
Query: 234 LLFSLYINDIPR------SPETHLAL--FADDTAIYYSCRKMSLLHRRLQIAVATLGQWF 389
+L+S++ +D+P SP + L +ADDT + S + R + + T W
Sbjct: 695 ILYSIFSSDMPLPHIYHPSPTERIMLSTYADDTIVLSSDILATAATRNNENYLKTFSDWA 754
Query: 390 RKWRIDINPTKSAAVLFKRGRPPNITSGIPLRSRRANTSAVSPITLFGQPIPWVSKVKYL 569
KW I +N K+ V++ + + IP + + + GQ I SK YL
Sbjct: 755 DKWGISVNAAKTGHVIY------TLKNDIPTN--------LKTMKIKGQAIKKESKQSYL 800
Query: 570 GVTLDRGMTFRPHIKTVRDRAAFILGRLYPMLCSRSKLSLRNKVTLYKTCIRP 728
GV LD +T PH+ V + ++ +L RSKL K+ + K+ + P
Sbjct: 801 GVILDSKLTLSPHVTKVVGKYLTAYRKMSWILNERSKLPTNTKMLILKSVLSP 853
>X17551-2|CAA35587.1| 888|Drosophila melanogaster protein (
D.melanogaster white-one mutant DNA with Doc retroposon,
inserted inwhite locuspromoter region. ).
Length = 888
Score = 65.7 bits (153), Expect = 7e-11
Identities = 49/165 (29%), Positives = 70/165 (42%)
Frame = +3
Query: 234 LLFSLYINDIPRSPETHLALFADDTAIYYSCRKMSLLHRRLQIAVATLGQWFRKWRIDIN 413
+L++LY D P + FADDTAI + L + ++ +W WRI IN
Sbjct: 645 ILYTLYTADFPIDYNLTTSTFADDTAILSRSKCPIKATALLSRHLTSVERWLADWRISIN 704
Query: 414 PTKSAAVLFKRGRPPNITSGIPLRSRRANTSAVSPITLFGQPIPWVSKVKYLGVTLDRGM 593
K V F N P+ L IP +V YLGV LDR +
Sbjct: 705 VQKCKQVTFT-----------------LNKQTCPPLVLNNICIPQADEVTYLGVHLDRRL 747
Query: 594 TFRPHIKTVRDRAAFILGRLYPMLCSRSKLSLRNKVTLYKTCIRP 728
T+R HI+ L+ ++ +RS LSL K LY + ++P
Sbjct: 748 TWRKHIEAKSKHLKLKARNLHWLINARSPLSLEFKALLYNSVLKP 792
Score = 65.3 bits (152), Expect = 1e-10
Identities = 29/72 (40%), Positives = 47/72 (65%)
Frame = +2
Query: 23 ALFFDIAKAFDKVWHNGLIYKLYNMGVPDRLVLIIRDFLSNRSFRYRVEGTRSRPRQLTA 202
A+F D+A+AFD+VW +GL++K+ + +P +++ +L NR F R + + SR + A
Sbjct: 576 AIFLDVAQAFDRVWLDGLLFKIIKL-LPQNTHKLLKSYLYNRVFAIRCDTSTSRDCAIEA 634
Query: 203 GVPQGSALSPXI 238
GVPQGS L P +
Sbjct: 635 GVPQGSVLGPIL 646
>AY047531-1|AAK77263.1| 888|Drosophila melanogaster GH03753p protein.
Length = 888
Score = 65.7 bits (153), Expect = 7e-11
Identities = 49/165 (29%), Positives = 70/165 (42%)
Frame = +3
Query: 234 LLFSLYINDIPRSPETHLALFADDTAIYYSCRKMSLLHRRLQIAVATLGQWFRKWRIDIN 413
+L++LY D P + FADDTAI + L + ++ +W WRI IN
Sbjct: 645 ILYTLYTADFPIDYNLTTSTFADDTAILSRSKCPIKATALLSRHLTSVERWLADWRISIN 704
Query: 414 PTKSAAVLFKRGRPPNITSGIPLRSRRANTSAVSPITLFGQPIPWVSKVKYLGVTLDRGM 593
K V F N P+ L IP +V YLGV LDR +
Sbjct: 705 VQKCKQVTFT-----------------LNKQTCPPLVLNNICIPQADEVTYLGVHLDRRL 747
Query: 594 TFRPHIKTVRDRAAFILGRLYPMLCSRSKLSLRNKVTLYKTCIRP 728
T+R HI+ L+ ++ +RS LSL K LY + ++P
Sbjct: 748 TWRKHIEAKSKHLKLKARNLHWLINARSPLSLEFKALLYNSVLKP 792
Score = 62.9 bits (146), Expect = 5e-10
Identities = 28/72 (38%), Positives = 46/72 (63%)
Frame = +2
Query: 23 ALFFDIAKAFDKVWHNGLIYKLYNMGVPDRLVLIIRDFLSNRSFRYRVEGTRSRPRQLTA 202
A+F D+A+AFD+VW +GL++K+ + +P +++ +L N F R + + SR + A
Sbjct: 576 AIFLDVAQAFDRVWLDGLLFKIIKL-LPQNTHKLLKSYLYNTVFAIRCDTSTSRDCAIEA 634
Query: 203 GVPQGSALSPXI 238
GVPQGS L P +
Sbjct: 635 GVPQGSVLGPIL 646
>AY060323-1|AAL25362.1| 241|Drosophila melanogaster GH20809p
protein.
Length = 241
Score = 62.9 bits (146), Expect = 5e-10
Identities = 28/72 (38%), Positives = 45/72 (62%)
Frame = +2
Query: 23 ALFFDIAKAFDKVWHNGLIYKLYNMGVPDRLVLIIRDFLSNRSFRYRVEGTRSRPRQLTA 202
ALF D+A+AFD+VW +GL++K+ + +P + +++ +L R F R + S + A
Sbjct: 117 ALFLDVAQAFDRVWLDGLMFKIIQL-LPQNIHKLLKSYLDKRVFAVRCSSSTSSDFTIEA 175
Query: 203 GVPQGSALSPXI 238
GVPQGS L P +
Sbjct: 176 GVPQGSVLGPIL 187
Score = 30.3 bits (65), Expect = 3.4
Identities = 13/27 (48%), Positives = 19/27 (70%)
Frame = +3
Query: 234 LLFSLYINDIPRSPETHLALFADDTAI 314
+L++LY DIP + + + FADDTAI
Sbjct: 186 ILYTLYTADIPTNYQLTIFTFADDTAI 212
>AJ302712-2|CAC16871.1| 1227|Drosophila melanogaster pol protein.
Length = 1227
Score = 54.4 bits (125), Expect = 2e-07
Identities = 26/65 (40%), Positives = 39/65 (60%)
Frame = +2
Query: 35 DIAKAFDKVWHNGLIYKLYNMGVPDRLVLIIRDFLSNRSFRYRVEGTRSRPRQLTAGVPQ 214
D +AFD+V + ++ +L G+ RL +I+ F++NRSFR R+ S L G+PQ
Sbjct: 584 DFERAFDRVGIHAVLCRLERWGIGPRLYNLIKAFMTNRSFRVRINNVTSNSHILHNGIPQ 643
Query: 215 GSALS 229
GS LS
Sbjct: 644 GSPLS 648
>M14954-2|AAA70222.2| 1219|Drosophila melanogaster putative ORF2
protein.
Length = 1219
Score = 48.4 bits (110), Expect = 1e-05
Identities = 24/71 (33%), Positives = 39/71 (54%)
Frame = +2
Query: 17 TGALFFDIAKAFDKVWHNGLIYKLYNMGVPDRLVLIIRDFLSNRSFRYRVEGTRSRPRQL 196
T + D ++AFD+V + +I +L +++ I++F+SNR RV S P L
Sbjct: 570 TSLVTLDFSRAFDRVGVHSIIQQLQEWKTGPKIIKYIKNFMSNRKITVRVGPHTSSPLPL 629
Query: 197 TAGVPQGSALS 229
G+PQGS +S
Sbjct: 630 FNGIPQGSPIS 640
>X51968-2|CAA36227.1| 1021|Drosophila melanogaster protein (
Drosophila melanogasterDNA for type I retrotransposable
element R1Dm. ).
Length = 1021
Score = 45.6 bits (103), Expect = 8e-05
Identities = 22/66 (33%), Positives = 37/66 (56%)
Frame = +3
Query: 531 GQPIPWVSKVKYLGVTLDRGMTFRPHIKTVRDRAAFILGRLYPMLCSRSKLSLRNKVTLY 710
G+ +P+V +YLG+T+ GM F HI ++R R ++G L +L + S R + T+Y
Sbjct: 725 GRNLPYVRSCRYLGITVSEGMKFLTHIASLRQRMTGVVGALARVLRADWGFSPRARRTIY 784
Query: 711 KTCIRP 728
+ P
Sbjct: 785 DGLMAP 790
>AJ278684-2|CAB99192.1| 989|Drosophila melanogaster
endonuclease/reverse transcriptase protein.
Length = 989
Score = 42.3 bits (95), Expect = 8e-04
Identities = 26/74 (35%), Positives = 41/74 (55%), Gaps = 1/74 (1%)
Frame = +2
Query: 35 DIAKAFDKVWHNGLIYKLYNMGVPDRLVLIIRDFLSNRSFRYRVE-GTRSRPRQLTAGVP 211
D+ AF+ ++ + N+GVPD + +I ++ +R Y E G RS Q++AGVP
Sbjct: 557 DVKNAFNTARWPIILGAMRNLGVPDYIRGVIGNYFRDRVLWYVTEDGPRSH--QVSAGVP 614
Query: 212 QGSALSPXII*FVY 253
QGS L P + +Y
Sbjct: 615 QGSVLGPILWNIMY 628
Score = 36.7 bits (81), Expect = 0.039
Identities = 34/130 (26%), Positives = 52/130 (40%)
Frame = +3
Query: 264 PRSPETHLALFADDTAIYYSCRKMSLLHRRLQIAVATLGQWFRKWRIDINPTKSAAVLFK 443
PR E H FADD AI + + L +A+ +W K + I K+ VL
Sbjct: 637 PRGVELHC--FADDVAITAVAKTIPELQDISNVAITAAIEWLEKVGLKIAAHKTEVVLL- 693
Query: 444 RGRPPNITSGIPLRSRRANTSAVSPITLFGQPIPWVSKVKYLGVTLDRGMTFRPHIKTVR 623
S R + + + + G I +KYLGV +DR ++F+ H +
Sbjct: 694 --------------SSRKSVECMR-VEVKGVEIASAETLKYLGVLIDRRLSFKAHARYAS 738
Query: 624 DRAAFILGRL 653
+AA L
Sbjct: 739 KKAAMTAAAL 748
>U14102-1|AAC46495.1| 299|Drosophila melanogaster putative reverse
transcriptase protein.
Length = 299
Score = 37.9 bits (84), Expect = 0.017
Identities = 21/66 (31%), Positives = 33/66 (50%)
Frame = +3
Query: 531 GQPIPWVSKVKYLGVTLDRGMTFRPHIKTVRDRAAFILGRLYPMLCSRSKLSLRNKVTLY 710
GQ I SK YLGV LD +T H+ + + ++ +L RSKL + K+ +
Sbjct: 3 GQVIKIESKQSYLGVILDSKLTLSSHVTKLMGKYTTAYRKMTWILNRRSKLPTKTKMLIL 62
Query: 711 KTCIRP 728
K+ + P
Sbjct: 63 KSVLSP 68
>AE014297-833|AAN13403.2| 1293|Drosophila melanogaster CG31349-PC,
isoform C protein.
Length = 1293
Score = 32.7 bits (71), Expect = 0.64
Identities = 18/63 (28%), Positives = 29/63 (46%)
Frame = +3
Query: 357 QIAVATLGQWFRKWRIDINPTKSAAVLFKRGRPPNITSGIPLRSRRANTSAVSPITLFGQ 536
QIA++ W+RK R I+ +S AV + P +P R T S +++G
Sbjct: 759 QIALSDEESWYRKLRDSIDLQQSGAVWMSESKVP-YDHAVPANPNRRQTMDSSKYSIYGT 817
Query: 537 PIP 545
+P
Sbjct: 818 NVP 820
>AE014297-832|AAF54301.3| 2090|Drosophila melanogaster CG31349-PA,
isoform A protein.
Length = 2090
Score = 32.7 bits (71), Expect = 0.64
Identities = 18/63 (28%), Positives = 29/63 (46%)
Frame = +3
Query: 357 QIAVATLGQWFRKWRIDINPTKSAAVLFKRGRPPNITSGIPLRSRRANTSAVSPITLFGQ 536
QIA++ W+RK R I+ +S AV + P +P R T S +++G
Sbjct: 759 QIALSDEESWYRKLRDSIDLQQSGAVWMSESKVP-YDHAVPANPNRRQTMDSSKYSIYGT 817
Query: 537 PIP 545
+P
Sbjct: 818 NVP 820
>AY071740-1|AAL49362.1| 184|Drosophila melanogaster RH47344p
protein.
Length = 184
Score = 31.9 bits (69), Expect = 1.1
Identities = 20/49 (40%), Positives = 23/49 (46%)
Frame = +2
Query: 92 NMGVPDRLVLIIRDFLSNRSFRYRVEGTRSRPRQLTAGVPQGSALSPXI 238
N P LV IR + SNR R Q+T GVPQGS L P +
Sbjct: 14 NFSDPAYLVRFIRSYSSNRVLPCESSEGVFR-HQVTGGVPQGSVLGPLL 61
>Y17918-1|CAA76938.1| 1441|Drosophila melanogaster CRAG protein
protein.
Length = 1441
Score = 31.1 bits (67), Expect = 1.9
Identities = 14/30 (46%), Positives = 17/30 (56%)
Frame = +2
Query: 389 PEVANRHQPHEKRSGALQKGSPSEHHFGHP 478
P + HQ RSGA Q+ S +HFGHP
Sbjct: 1410 PADESAHQGAAHRSGAAQQECHSANHFGHP 1439
>X51967-1|CAA36225.1| 1057|Drosophila melanogaster protein (
Drosophila melanogasterDNA for type II retrotransposable
element R2Dm. ).
Length = 1057
Score = 31.1 bits (67), Expect = 1.9
Identities = 19/68 (27%), Positives = 28/68 (41%)
Frame = +2
Query: 35 DIAKAFDKVWHNGLIYKLYNMGVPDRLVLIIRDFLSNRSFRYRVEGTRSRPRQLTAGVPQ 214
D++KAFD + H + L G P V +++ +G S GV Q
Sbjct: 482 DVSKAFDSLSHASIYDTLRAYGAPKGFVDYVQNTYEGGGTSLNGDGWSSEEFVPARGVKQ 541
Query: 215 GSALSPXI 238
G LSP +
Sbjct: 542 GDPLSPIL 549
>BT010264-1|AAQ23582.1| 1238|Drosophila melanogaster RE27764p protein.
Length = 1238
Score = 29.9 bits (64), Expect = 4.5
Identities = 24/68 (35%), Positives = 32/68 (47%), Gaps = 10/68 (14%)
Frame = +3
Query: 417 TKSAAVLFKRGRP-PNITSGIPLRS---------RRANTSAVSPITLFGQPIPWVSKVKY 566
T SA +R +P P I S I L + R+ + SP T FG P+P VS ++
Sbjct: 1035 THSAISTSQRPKPTPTINSNIDLNNTILHTKYFNRKPQPGSGSPFTFFGYPLPSVSLGRF 1094
Query: 567 LGVTLDRG 590
G DRG
Sbjct: 1095 FGFG-DRG 1101
>AE014296-3371|AAF51605.2| 1535|Drosophila melanogaster CG5195-PA
protein.
Length = 1535
Score = 29.9 bits (64), Expect = 4.5
Identities = 24/68 (35%), Positives = 32/68 (47%), Gaps = 10/68 (14%)
Frame = +3
Query: 417 TKSAAVLFKRGRP-PNITSGIPLRS---------RRANTSAVSPITLFGQPIPWVSKVKY 566
T SA +R +P P I S I L + R+ + SP T FG P+P VS ++
Sbjct: 1035 THSAISTSQRPKPTPTINSNIDLNNTILHTKYFNRKPQPGSGSPFTFFGYPLPSVSLGRF 1094
Query: 567 LGVTLDRG 590
G DRG
Sbjct: 1095 FGFG-DRG 1101
>DQ168463-1|AAZ81897.1| 1522|Drosophila melanogaster BBG-LP12
protein.
Length = 1522
Score = 29.5 bits (63), Expect = 5.9
Identities = 16/41 (39%), Positives = 26/41 (63%)
Frame = +2
Query: 341 ASSATPDRSSHPGTVVPEVANRHQPHEKRSGALQKGSPSEH 463
+SS++P SS TV+P+VA + QP+E+R L + + H
Sbjct: 846 SSSSSP--SSCSSTVIPDVAFKLQPYEERDDILSEPITTIH 884
>DQ168462-1|AAZ81896.1| 1842|Drosophila melanogaster PDZ
domain-containing proteinBBG-LP10 protein.
Length = 1842
Score = 29.5 bits (63), Expect = 5.9
Identities = 14/40 (35%), Positives = 24/40 (60%)
Frame = +2
Query: 344 SSATPDRSSHPGTVVPEVANRHQPHEKRSGALQKGSPSEH 463
+S++ SS TV+P+VA + QP+E+R L + + H
Sbjct: 64 TSSSSSSSSCSSTVIPDVAFKLQPYEERDDILSEPITTIH 103
>BT011179-1|AAR88540.1| 1125|Drosophila melanogaster RE71243p
protein.
Length = 1125
Score = 29.5 bits (63), Expect = 5.9
Identities = 15/42 (35%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
Frame = +3
Query: 498 NTSAVSPITLFGQPIPWVSKVKYLGVTLDRGM-TFRPHIKTV 620
NT +PI G+P PW+ K+ V R M T P++ T+
Sbjct: 117 NTQPFNPIATNGEPFPWLEKMLPTSVRPLRYMVTIHPNLTTL 158
>BT010001-1|AAQ22470.1| 1088|Drosophila melanogaster RE31064p
protein.
Length = 1088
Score = 29.5 bits (63), Expect = 5.9
Identities = 15/42 (35%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
Frame = +3
Query: 498 NTSAVSPITLFGQPIPWVSKVKYLGVTLDRGM-TFRPHIKTV 620
NT +PI G+P PW+ K+ V R M T P++ T+
Sbjct: 80 NTQPFNPIATNGEPFPWLEKMLPTSVRPLRYMVTIHPNLTTL 121
>AY075159-1|AAL68029.1| 198|Drosophila melanogaster AT03803p
protein.
Length = 198
Score = 29.5 bits (63), Expect = 5.9
Identities = 18/49 (36%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
Frame = -1
Query: 535 WPKRVMGLTAEVFARLLRSGMPEVMFGGRPLLKSTAALFVG-LMSIRHF 392
W + GL A+ F + SG P V PLL S A L V ++ +HF
Sbjct: 67 WSLIICGLVAQGFHLGIMSGFPFVRLLSLPLLGSLAMLVVNHFLAFQHF 115
>AY071225-1|AAL48847.1| 1203|Drosophila melanogaster RE26660p
protein.
Length = 1203
Score = 29.5 bits (63), Expect = 5.9
Identities = 20/71 (28%), Positives = 28/71 (39%)
Frame = +2
Query: 413 PHEKRSGALQKGSPSEHHFGHPTP**ARKHLRR*SHHSLWPAHSVGLEGQISRRHPRQRD 592
P E++SGA+ K + HH H P H H P ++S R R R
Sbjct: 18 PQEQQSGAIMKAANQPHHPAHSHP---LNHPHPHQHAQPHPHPHPHPHHKLSARRARSRS 74
Query: 593 DIPSPYKNGTR 625
SP +G +
Sbjct: 75 RSRSPTPDGNQ 85
>AE014297-3297|AAF56113.2| 1088|Drosophila melanogaster CG4467-PA,
isoform A protein.
Length = 1088
Score = 29.5 bits (63), Expect = 5.9
Identities = 15/42 (35%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
Frame = +3
Query: 498 NTSAVSPITLFGQPIPWVSKVKYLGVTLDRGM-TFRPHIKTV 620
NT +PI G+P PW+ K+ V R M T P++ T+
Sbjct: 80 NTQPFNPIATNGEPFPWLEKMLPTSVRPLRYMVTIHPNLTTL 121
>AE014297-3296|ABI31198.1| 1125|Drosophila melanogaster CG4467-PB,
isoform B protein.
Length = 1125
Score = 29.5 bits (63), Expect = 5.9
Identities = 15/42 (35%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
Frame = +3
Query: 498 NTSAVSPITLFGQPIPWVSKVKYLGVTLDRGM-TFRPHIKTV 620
NT +PI G+P PW+ K+ V R M T P++ T+
Sbjct: 117 NTQPFNPIATNGEPFPWLEKMLPTSVRPLRYMVTIHPNLTTL 158
>AE014296-2385|AAF49738.1| 1552|Drosophila melanogaster CG9587-PA
protein.
Length = 1552
Score = 29.5 bits (63), Expect = 5.9
Identities = 14/40 (35%), Positives = 24/40 (60%)
Frame = +2
Query: 344 SSATPDRSSHPGTVVPEVANRHQPHEKRSGALQKGSPSEH 463
+S++ SS TV+P+VA + QP+E+R L + + H
Sbjct: 859 TSSSSSSSSCSSTVIPDVAFKLQPYEERDDILSEPITTIH 898
>AE014296-982|AAF50759.1| 1203|Drosophila melanogaster CG5249-PA
protein.
Length = 1203
Score = 29.5 bits (63), Expect = 5.9
Identities = 20/71 (28%), Positives = 28/71 (39%)
Frame = +2
Query: 413 PHEKRSGALQKGSPSEHHFGHPTP**ARKHLRR*SHHSLWPAHSVGLEGQISRRHPRQRD 592
P E++SGA+ K + HH H P H H P ++S R R R
Sbjct: 18 PQEQQSGAIMKAANQPHHPAHSHP---LNHPHPHQHAQPHPHPHPHPHHKLSARRARSRS 74
Query: 593 DIPSPYKNGTR 625
SP +G +
Sbjct: 75 RSRSPTPDGNQ 85
>AE013599-3578|AAF46985.1| 198|Drosophila melanogaster CG3500-PA
protein.
Length = 198
Score = 29.5 bits (63), Expect = 5.9
Identities = 18/49 (36%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
Frame = -1
Query: 535 WPKRVMGLTAEVFARLLRSGMPEVMFGGRPLLKSTAALFVG-LMSIRHF 392
W + GL A+ F + SG P V PLL S A L V ++ +HF
Sbjct: 67 WSLIICGLVAQGFHLGIMSGFPFVRLLSLPLLGSLAMLVVNHFLAFQHF 115
>DQ168451-1|AAZ81890.1| 356|Drosophila melanogaster BBG-LP12
protein.
Length = 356
Score = 29.1 bits (62), Expect = 7.8
Identities = 13/34 (38%), Positives = 22/34 (64%)
Frame = +2
Query: 344 SSATPDRSSHPGTVVPEVANRHQPHEKRSGALQK 445
+S++ SS TV+P+VA + QP+E+R L +
Sbjct: 318 TSSSSSSSSCSSTVIPDVAFKLQPYEERDDILSE 351
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 38,347,622
Number of Sequences: 53049
Number of extensions: 904187
Number of successful extensions: 2852
Number of sequences better than 10.0: 45
Number of HSP's better than 10.0 without gapping: 2627
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2813
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3962724636
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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