Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP03_FL5_O15
(854 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic ac... 61 1e-11
DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channe... 59 4e-11
DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 57 2e-10
DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 55 7e-10
AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic ac... 55 7e-10
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 54 1e-09
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 54 1e-09
DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholi... 54 2e-09
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 53 3e-09
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 53 3e-09
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 53 4e-09
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 52 7e-09
DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholi... 52 7e-09
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 52 9e-09
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 51 2e-08
DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated... 51 2e-08
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 50 2e-08
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 50 2e-08
AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic ac... 50 2e-08
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 50 3e-08
DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholi... 50 4e-08
DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chlor... 45 1e-06
DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride c... 44 2e-06
DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride c... 42 5e-06
DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chlor... 42 7e-06
DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channe... 38 2e-04
AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl sub... 34 0.002
DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated... 26 0.38
DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated... 25 1.2
DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chlor... 24 2.1
AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein. 23 4.7
>AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic
acetylcholine receptorApisa2 subunit protein.
Length = 541
Score = 60.9 bits (141), Expect = 1e-11
Identities = 48/159 (30%), Positives = 69/159 (43%), Gaps = 9/159 (5%)
Frame = +1
Query: 76 IASAAECENATSLSLMIDSLLATYDRDSPPDSK----IVVNLTLHLRHA---NIRESEST 234
I SA C + D LL+ Y+R P S +VV L L L N+++ T
Sbjct: 9 ILSARICHGNPDAKRLYDDLLSNYNRLIRPVSNNNDTVVVKLGLRLSQLIDLNLKDQILT 68
Query: 235 VRIQADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTAGDYAL-RAR 408
+ L+ W D + W+ E+G T L V SE +W PD+VL N A G + +A
Sbjct: 69 TNVW--LEHEWQDHKFQWDPAEYGGVTELYVPSEHIWLPDIVLYNNADGEYGVTTMTKAI 126
Query: 409 VSNNGSVSWIKRLDISTPISMQLDNWXNDMQTCTFKXGS 525
+ G V W + + + + D QTC K GS
Sbjct: 127 LHYTGKVLWTPPAIFKSSCEIDVRYFPFDQQTCFMKFGS 165
>DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channel
protein.
Length = 463
Score = 59.3 bits (137), Expect = 4e-11
Identities = 39/149 (26%), Positives = 68/149 (45%), Gaps = 7/149 (4%)
Frame = +1
Query: 100 NATSLSLMIDSLLATYDRDSPPD---SKIVVNLTLHLRHAN-IRESESTVRIQADLQMNW 267
N +++S ++D+LL YD PD V + + +R I E + T + + +W
Sbjct: 2 NHSNISELLDNLLRGYDNSVRPDFGGPPATVEVDIMVRSMGPISEVDMTYSMDCYFRQSW 61
Query: 268 IDKRLSWNAGEWGCSTWLVSSERLWRPDVVLLNAAAT---TAGDYALRARVSNNGSVSWI 438
+D+RL++ G+ + + R+W+PD N + T R+ +G V +
Sbjct: 62 VDRRLAFQGGKETLALSISMLARIWKPDTYFYNGKHSYLHTITSPNKFVRLYQDGRVLYS 121
Query: 439 KRLDISTPISMQLDNWXNDMQTCTFKXGS 525
RL I M L+N+ D Q C + GS
Sbjct: 122 SRLTIKAGCPMNLENFPMDTQRCPLQFGS 150
>DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine
receptor alpha3subunit protein.
Length = 566
Score = 56.8 bits (131), Expect = 2e-10
Identities = 39/153 (25%), Positives = 67/153 (43%), Gaps = 9/153 (5%)
Frame = +1
Query: 94 CENATSLSLMIDSLLATYDRDSPPDSKIVVNLTLHLR-------HANIRESESTVRIQAD 252
C + D LL+ Y++ P + LT+ ++ N++ T +
Sbjct: 19 CSGNPDAKRLYDDLLSNYNKLVRPVVNVTDALTVKIKLKLSQLIDVNLKNQIMTTNLW-- 76
Query: 253 LQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLL-NAAATTAGDYALRARVSNNGS 426
++ +W D +L W+ E+G L V S+ +WRPD+VL NA A +A ++ G
Sbjct: 77 VEQSWYDYKLKWDPKEYGGVEMLHVPSDHIWRPDIVLYNNADGNFEVTLATKATLNYTGR 136
Query: 427 VSWIKRLDISTPISMQLDNWXNDMQTCTFKXGS 525
V W + + ++ + D QTC K GS
Sbjct: 137 VEWKPPAIYKSSCEIDVEYFPFDEQTCVMKFGS 169
>DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine
receptor beta1subunit protein.
Length = 520
Score = 55.2 bits (127), Expect = 7e-10
Identities = 34/128 (26%), Positives = 61/128 (47%), Gaps = 6/128 (4%)
Frame = +1
Query: 172 KIVVNLTL-HLRHANIRESESTVRIQADLQMNWIDKRLSWNAGEWG-CSTWLVSSERLWR 345
K+ VN L ++ N+ E ++ L+ W D +L W+ ++G + +++W+
Sbjct: 51 KVHVNFGLAFVQLINVNEKNQIMKSNVWLRFIWTDYQLQWDEADYGGIGVLRLPPDKVWK 110
Query: 346 PDVVLLNAAATTAGDYALRAR----VSNNGSVSWIKRLDISTPISMQLDNWXNDMQTCTF 513
PD+VL N A G+Y +R + + NG V W+ + ++ + + D QTC
Sbjct: 111 PDIVLFNNAD---GNYEVRYKSNVLIYPNGDVLWVPPAIYQSSCTIDVTYFPFDQQTCIM 167
Query: 514 KXGSRMHN 537
K GS N
Sbjct: 168 KFGSWTFN 175
>AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha-3 protein.
Length = 537
Score = 55.2 bits (127), Expect = 7e-10
Identities = 43/151 (28%), Positives = 67/151 (44%), Gaps = 12/151 (7%)
Frame = +1
Query: 121 MIDSLLATYDRDSPPDSKIVVNLTLHLR-------HANIRESESTVRIQADLQMNWIDKR 279
+ D LL+ Y+R P LT+ L N++ T + ++ W D +
Sbjct: 37 LYDDLLSNYNRLIRPVMNNTETLTVQLGLKLSQLIEMNLKNQVMTTNVW--VEQRWNDYK 94
Query: 280 LSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTAGDYAL----RARVSNNGSVSWIKR 444
L WN E+G L V SE +W PD+VL N A G+Y + +A + G VSW
Sbjct: 95 LKWNPEEYGGVEMLYVPSENIWLPDIVLYNNA---DGNYEVTLMTKATLKYTGDVSWKPP 151
Query: 445 LDISTPISMQLDNWXNDMQTCTFKXGSRMHN 537
+ + ++ + D Q+C K GS +N
Sbjct: 152 AIYKSSCEINVEYFPFDEQSCIMKFGSWTYN 182
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 54.4 bits (125), Expect = 1e-09
Identities = 40/145 (27%), Positives = 72/145 (49%), Gaps = 10/145 (6%)
Frame = +1
Query: 121 MIDSLLATYDRDSPP--DSKIVVNLTLHLRHANIRESESTVRIQAD---LQMNWIDKRLS 285
+ D LL+ Y++ P ++ V+ + + L+ + + + +I ++ +W D +L
Sbjct: 32 LYDDLLSNYNKLVRPVVNTSDVLRVCIKLKLSQLIDVNLKNQIMTTNLWVEQSWYDYKLR 91
Query: 286 WNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTAGDYAL----RARVSNNGSVSWIKRLD 450
W E+G L V S+ +WRPD+VL N A G+Y + +A V +G V W
Sbjct: 92 WEPKEYGGVKMLHVPSDHIWRPDIVLYNNA---DGNYEVTLMTKATVYYSGLVVWQPPAV 148
Query: 451 ISTPISMQLDNWXNDMQTCTFKXGS 525
+ S+ ++ + D+QTC K GS
Sbjct: 149 YKSSCSIDVEFFPYDVQTCVLKLGS 173
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 54.4 bits (125), Expect = 1e-09
Identities = 37/142 (26%), Positives = 67/142 (47%), Gaps = 7/142 (4%)
Frame = +1
Query: 121 MIDSLLATYDRDSPP--DSKIVVNLTLHLRHANIRESESTVRIQAD---LQMNWIDKRLS 285
+ D LL+ Y++ P ++ V+ + + L+ + + + +I ++ +W D +L
Sbjct: 32 LYDDLLSNYNKLVRPVVNTSDVLRVCIKLKLSQLIDVNLKNQIMTTNLWVEQSWYDYKLR 91
Query: 286 WNAGEWGCSTWL-VSSERLWRPDVVLL-NAAATTAGDYALRARVSNNGSVSWIKRLDIST 459
W E+G L V S+ +WRPD+VL NA A +A + + G V W +
Sbjct: 92 WEPKEYGGVKMLHVPSDHIWRPDIVLYNNADGNFEVTLATKATIYHQGLVEWKPPAIYKS 151
Query: 460 PISMQLDNWXNDMQTCTFKXGS 525
+ ++ + D QTC K GS
Sbjct: 152 SCEIDVEYFPFDEQTCVLKFGS 173
>DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholine
receptor alpha1subunit protein.
Length = 601
Score = 54.0 bits (124), Expect = 2e-09
Identities = 43/165 (26%), Positives = 72/165 (43%), Gaps = 12/165 (7%)
Frame = +1
Query: 67 TCAIASAAECENATSLSLMIDSLLATYDRDSPP----DSKIVVNLTLHLRH---ANIRES 225
+C +A + + D LL+ Y+R P ++ V + L L N++
Sbjct: 6 SCLVAPFPGASANSEAKRLYDDLLSNYNRLIRPVGNNSDRLTVKMGLRLSQLIDVNLKNQ 65
Query: 226 ESTVRIQADLQMNWIDKRLSWNAGEWG-CSTWLVSSERLWRPDVVLLNAAATTAGDYAL- 399
T + ++ W D +L WN ++G T V SE +W PD+VL N A G+Y +
Sbjct: 66 IMTTNVW--VEQEWNDYKLKWNPDDYGGVDTLHVPSEHIWLPDIVLYNNA---DGNYEVT 120
Query: 400 ---RARVSNNGSVSWIKRLDISTPISMQLDNWXNDMQTCTFKXGS 525
+A + + G V W + + ++ + D QTC K GS
Sbjct: 121 IMTKAILHHTGKVVWKPPAIYKSFCEIDVEYFPFDEQTCFMKFGS 165
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 53.2 bits (122), Expect = 3e-09
Identities = 28/107 (26%), Positives = 51/107 (47%), Gaps = 2/107 (1%)
Frame = +1
Query: 211 NIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 384
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 93 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 152
Query: 385 GDYALRARVSNNGSVSWIKRLDISTPISMQLDNWXNDMQTCTFKXGS 525
G Y V++NGS ++ + + + + D Q C K GS
Sbjct: 153 GTYQTNVVVTHNGSCLYVPPGIFKSTCKIDITWFPFDDQHCDMKFGS 199
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 53.2 bits (122), Expect = 3e-09
Identities = 28/107 (26%), Positives = 51/107 (47%), Gaps = 2/107 (1%)
Frame = +1
Query: 211 NIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 384
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 93 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 152
Query: 385 GDYALRARVSNNGSVSWIKRLDISTPISMQLDNWXNDMQTCTFKXGS 525
G Y V++NGS ++ + + + + D Q C K GS
Sbjct: 153 GTYQTNVVVTHNGSCLYVPPGIFKSTCKIDITWFPFDDQHCDMKFGS 199
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 52.8 bits (121), Expect = 4e-09
Identities = 28/107 (26%), Positives = 51/107 (47%), Gaps = 2/107 (1%)
Frame = +1
Query: 211 NIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 384
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 385 GDYALRARVSNNGSVSWIKRLDISTPISMQLDNWXNDMQTCTFKXGS 525
G Y V++NGS ++ + + + + D Q C K GS
Sbjct: 85 GTYQTSVVVTHNGSCLYVPPGIFKSTCKIDITWFPFDDQHCDMKFGS 131
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 52.0 bits (119), Expect = 7e-09
Identities = 28/107 (26%), Positives = 51/107 (47%), Gaps = 2/107 (1%)
Frame = +1
Query: 211 NIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 384
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 385 GDYALRARVSNNGSVSWIKRLDISTPISMQLDNWXNDMQTCTFKXGS 525
G Y V+++GS ++ + M + + D Q C K GS
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKMDIAWFPFDDQHCDMKFGS 131
>DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholine
receptor beta2subunit protein.
Length = 427
Score = 52.0 bits (119), Expect = 7e-09
Identities = 40/157 (25%), Positives = 71/157 (45%), Gaps = 10/157 (6%)
Frame = +1
Query: 94 CENATSLSLMIDS---LLATYDRDSPPDSKIV--VNLTLHLRHANIRESESTVRIQADLQ 258
C++ TS S + L YDRD P+ K ++ L ++H N+ E TV L+
Sbjct: 28 CKDITSTSALYRLKLYLFCDYDRDIIPEQKNATKIDFGLSIQHYNVDEYSHTVDFHVMLK 87
Query: 259 MNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVL--LNAAATTAGDYALRARVSNNGSV 429
+ W L+W + E+ ++ V S +W PD+V+ + + ++ V N+G++
Sbjct: 88 LMWEQSHLTWKSSEFDSINSIRVKSYEIWVPDIVMHSVTSVGIDLEMPSVECIVFNSGTI 147
Query: 430 SWIKRLDISTPISMQLDN--WXNDMQTCTFKXGSRMH 534
+ TP+ + D+ W D+ CT S H
Sbjct: 148 LCVP-FTTYTPV-CEYDHTWWPYDILNCTIHIASWSH 182
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 51.6 bits (118), Expect = 9e-09
Identities = 28/107 (26%), Positives = 51/107 (47%), Gaps = 2/107 (1%)
Frame = +1
Query: 211 NIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 384
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 385 GDYALRARVSNNGSVSWIKRLDISTPISMQLDNWXNDMQTCTFKXGS 525
G Y V+++GS ++ + M + + D Q C K GS
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKMDVAWFPFDDQHCDMKFGS 131
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 50.8 bits (116), Expect = 2e-08
Identities = 27/107 (25%), Positives = 51/107 (47%), Gaps = 2/107 (1%)
Frame = +1
Query: 211 NIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 384
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 385 GDYALRARVSNNGSVSWIKRLDISTPISMQLDNWXNDMQTCTFKXGS 525
G Y V+++GS ++ + + + + D Q C K GS
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKIDITWFPFDDQHCDMKFGS 131
>DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 510
Score = 50.8 bits (116), Expect = 2e-08
Identities = 35/147 (23%), Positives = 65/147 (44%), Gaps = 8/147 (5%)
Frame = +1
Query: 109 SLSLMIDSLLATYDRDSPPD----SKIVVNLTLHLRHAN-IRESESTVRIQADLQMNWID 273
++++++++LL Y+ + P + VV + +R + E + + + +W D
Sbjct: 36 NITMVLENLLMNYENNQLPTHGKGTPTVVKTNILIRSMGPVSELDMDYSMDCYFRQSWRD 95
Query: 274 KRLSWNAGEWGCSTWLVSSERLWRPDVVLLNAAATTAGDYALR---ARVSNNGSVSWIKR 444
RLS+ S + ER+WRPD N + + R+S +G + + R
Sbjct: 96 SRLSFLGPIKSLSLSIKMLERIWRPDTYFYNGKHSYVHTITVPNKLLRISQDGDILYSMR 155
Query: 445 LDISTPISMQLDNWXNDMQTCTFKXGS 525
L I M+L N+ D Q+C GS
Sbjct: 156 LTIKAKCPMELRNFPMDRQSCPLILGS 182
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 50.4 bits (115), Expect = 2e-08
Identities = 27/107 (25%), Positives = 51/107 (47%), Gaps = 2/107 (1%)
Frame = +1
Query: 211 NIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 384
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 385 GDYALRARVSNNGSVSWIKRLDISTPISMQLDNWXNDMQTCTFKXGS 525
G Y V+++GS ++ + + + + D Q C K GS
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKIDIAWFPFDDQHCDMKFGS 131
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 50.4 bits (115), Expect = 2e-08
Identities = 27/107 (25%), Positives = 51/107 (47%), Gaps = 2/107 (1%)
Frame = +1
Query: 211 NIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 384
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 385 GDYALRARVSNNGSVSWIKRLDISTPISMQLDNWXNDMQTCTFKXGS 525
G Y V+++GS ++ + + + + D Q C K GS
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFGSTCKIDIAWFPFDDQHCDMKFGS 131
>AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic
acetylcholine Apisa7-2 subunit protein.
Length = 461
Score = 50.4 bits (115), Expect = 2e-08
Identities = 32/120 (26%), Positives = 49/120 (40%), Gaps = 3/120 (2%)
Frame = +1
Query: 175 IVVNLTLHLRHANIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPD 351
+V L+LH ++ E + + W D L WNA E+ G V R+WRPD
Sbjct: 33 VVFGLSLH-HIIDVDEKNQILTTNCWVTQIWTDHHLKWNASEFAGIRVIRVPYNRVWRPD 91
Query: 352 VVLLNAAATTAGDYALRAR--VSNNGSVSWIKRLDISTPISMQLDNWXNDMQTCTFKXGS 525
+L N A + VS+ G V W+ + + ++ + D Q C K S
Sbjct: 92 TILYNNADPQYSSAVINTNVIVSHTGEVVWLSHGIFRSSCDIDVEFFPFDEQRCVLKWAS 151
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 50.0 bits (114), Expect = 3e-08
Identities = 38/158 (24%), Positives = 69/158 (43%), Gaps = 7/158 (4%)
Frame = +1
Query: 73 AIASAAECENATSLSLMIDSLLATYDRDSPP----DSKIVVNLTLHLRHA-NIRESESTV 237
A+A++ + +++ LL TY+ P +V++ L L ++ E +
Sbjct: 11 ALAASGLVNGGSHEKRLLNDLLDTYNVLERPVGNESEPLVLSFGLTLMQIIDVDEKNQLL 70
Query: 238 RIQADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAA-ATTAGDYALRARV 411
L++ W D + WN ++G L + RLW+PDV++ N+A G Y V
Sbjct: 71 ITNLWLKLEWNDVNMRWNVSDYGGVRDLRIPPHRLWKPDVLMYNSADEGFDGTYPTNVVV 130
Query: 412 SNNGSVSWIKRLDISTPISMQLDNWXNDMQTCTFKXGS 525
NNG+ ++ + + + + D Q C K GS
Sbjct: 131 KNNGTCLYVPPGIFKSTCKIDITWFPFDDQRCEMKFGS 168
>DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholine
receptor alpha9subunit protein.
Length = 431
Score = 49.6 bits (113), Expect = 4e-08
Identities = 37/155 (23%), Positives = 68/155 (43%), Gaps = 8/155 (5%)
Frame = +1
Query: 97 ENATSLSLMIDSLLATYDRDSPPDS--KIVVNLTLHL--RHANIRESESTVRIQADLQMN 264
++ T+L + L YD + P S +I N+T+ L + + S + + + + +
Sbjct: 39 DHPTTLLKLKRYLFCEYDPNVRPISSHQIANNVTMQLLPKLMEFDDWTSVMELHSWMTLM 98
Query: 265 WIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAAATT---AGDYALRARVSNNGSVS 432
W D LSW ++ G + V S+ +W PD+ + N+ T G V ++GSVS
Sbjct: 99 WTDSHLSWKPSDFDGINYIYVKSDDIWVPDISVYNSGDMTFDQTGIPPTTCLVFSSGSVS 158
Query: 433 WIKRLDISTPISMQLDNWXNDMQTCTFKXGSRMHN 537
+ + + +W D C GS +H+
Sbjct: 159 CVPSVKHVAKCATDFSSWPYDTHRCRINFGSWVHS 193
>DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 44.8 bits (101), Expect = 1e-06
Identities = 37/147 (25%), Positives = 64/147 (43%), Gaps = 12/147 (8%)
Frame = +1
Query: 121 MIDSLLATYDRDSPP------DSKIVVNLTLHLRH-ANIRESESTVRIQADLQMNWIDKR 279
++D++L YD P D +V + L +R A I + + +Q + W+D+R
Sbjct: 35 VLDNILGGYDARIRPSGENATDGPAIVRVNLFVRSIATISDIKMEYSVQLTFREQWLDER 94
Query: 280 LSWN--AGEWGCSTWLVSSERLWRPDVVLLNAAATTAGDYALR---ARVSNNGSVSWIKR 444
L +N G T L + R+W PD+ N + + R+ NGSV + R
Sbjct: 95 LRFNDFGGRLKYLT-LTDASRVWMPDLFFSNEKEGHFHNIIMPNVYIRIFPNGSVLYSIR 153
Query: 445 LDISTPISMQLDNWXNDMQTCTFKXGS 525
+ ++ M L + D Q C+ + S
Sbjct: 154 ISLTLSCPMNLKLYPLDRQVCSLRMAS 180
>DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 43.6 bits (98), Expect = 2e-06
Identities = 38/149 (25%), Positives = 69/149 (46%), Gaps = 13/149 (8%)
Frame = +1
Query: 100 NATSLSLMIDSLLATYDRDSPPD---SKIVVNLTLH-LRHANIRESESTVRIQADLQMNW 267
N ++S ++DS +YD+ P+ + V +T++ L +++ E + + + W
Sbjct: 8 NDVNISAILDSFSVSYDKRVRPNYGGPPVEVGVTMYVLSISSLSEVKMDFTLDFYFRQFW 67
Query: 268 IDKRLSWNAGEWGCSTWLVSSE---RLWRPDVVLLNAA------ATTAGDYALRARVSNN 420
D RL++ G T V SE +W PD +N ATT+ ++ R+ ++
Sbjct: 68 TDPRLAFKK-RTGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFI---RIHHS 123
Query: 421 GSVSWIKRLDISTPISMQLDNWXNDMQTC 507
GS++ RL I+ M L + D Q C
Sbjct: 124 GSITRSIRLTITASCPMNLQYFPMDRQLC 152
>DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 42.3 bits (95), Expect = 5e-06
Identities = 38/149 (25%), Positives = 68/149 (45%), Gaps = 13/149 (8%)
Frame = +1
Query: 100 NATSLSLMIDSLLATYDRDSPPD---SKIVVNLTLH-LRHANIRESESTVRIQADLQMNW 267
N ++S ++DS +YD+ P+ + V +T++ L +++ E + + W
Sbjct: 8 NDVNISAILDSFSVSYDKRVRPNYGGPPVEVGVTMYVLSISSVSEVLMDFTLDFYFRQFW 67
Query: 268 IDKRLSWNAGEWGCSTWLVSSE---RLWRPDVVLLNAA------ATTAGDYALRARVSNN 420
D RL++ G T V SE +W PD +N ATT+ ++ R+ ++
Sbjct: 68 TDPRLAFKK-RTGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFI---RIHHS 123
Query: 421 GSVSWIKRLDISTPISMQLDNWXNDMQTC 507
GS++ RL I+ M L + D Q C
Sbjct: 124 GSITRSIRLTITASCPMNLQYFPMDRQLC 152
>DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 41.9 bits (94), Expect = 7e-06
Identities = 36/147 (24%), Positives = 63/147 (42%), Gaps = 12/147 (8%)
Frame = +1
Query: 121 MIDSLLATYDRDSPP------DSKIVVNLTLHLRH-ANIRESESTVRIQADLQMNWIDKR 279
++D++L YD P D VV + + +R + I + +Q + W+D+R
Sbjct: 35 VLDNILGGYDARIRPSGENATDGPAVVRVNIFVRSISKIDDVTMEYSVQLTFREQWLDER 94
Query: 280 LSWN--AGEWGCSTWLVSSERLWRPDVVLLNAAATTAGDYALR---ARVSNNGSVSWIKR 444
L +N G T L + R+W PD+ N + + R+ NGSV + R
Sbjct: 95 LRFNDFGGRLKYLT-LTDASRVWMPDLFFSNEKEGHFHNIIMPNVYIRIFPNGSVLYSIR 153
Query: 445 LDISTPISMQLDNWXNDMQTCTFKXGS 525
+ ++ M L + D Q C+ + S
Sbjct: 154 ISLTLSCPMNLKLYPLDRQVCSLRMAS 180
>DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channel
protein.
Length = 489
Score = 37.5 bits (83), Expect = 2e-04
Identities = 29/107 (27%), Positives = 45/107 (42%), Gaps = 3/107 (2%)
Frame = +1
Query: 214 IRESESTVRIQADLQMNWIDKRLSWNAGEWGCSTWLVSSERLWRPDVVLLNAAATTAGDY 393
I E I L W D+RL+++ E + +E++W PD N + D
Sbjct: 75 ISEVNMDYTITMYLNQYWKDERLAFSQEEEVLTLSGDFAEKIWVPDTFFANDKNSFLHDV 134
Query: 394 ALR---ARVSNNGSVSWIKRLDISTPISMQLDNWXNDMQTCTFKXGS 525
R R+S +GSV++ R + M L + D Q CT + S
Sbjct: 135 TERNKLVRLSGDGSVTYGMRFTTTLACMMDLHYYPLDSQNCTVEIES 181
>AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl
subunit protein.
Length = 365
Score = 33.9 bits (74), Expect = 0.002
Identities = 27/90 (30%), Positives = 41/90 (45%), Gaps = 9/90 (10%)
Frame = +1
Query: 265 WIDKRLSWNAGEWGCSTWLVSSE---RLWRPDVVLLNAA------ATTAGDYALRARVSN 417
W D RL++ G T V SE +W PD +N ATT+ ++ R+ +
Sbjct: 6 WTDPRLAFKK-RTGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFI---RIHH 61
Query: 418 NGSVSWIKRLDISTPISMQLDNWXNDMQTC 507
+GS++ RL I+ M L + D Q C
Sbjct: 62 SGSITRSIRLTITASCPMNLQYFPMDRQLC 91
>DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 391
Score = 26.2 bits (55), Expect = 0.38
Identities = 26/122 (21%), Positives = 51/122 (41%), Gaps = 11/122 (9%)
Frame = +1
Query: 175 IVVNLTLHLRHAN-IRESESTVRIQADLQMNWIDKRLS-----WNAGEWGCSTWLVSSER 336
++V+ + + N I + R+ ++ +WI+ RL + G+ + +
Sbjct: 11 VLVDFNIFVADINSINVEDMDFRVDMFVRQSWIESRLDMPDYIFEEGDDYVTLPPEFFDS 70
Query: 337 LWRPDVVLLNAAATTAGDYALRARVSN-----NGSVSWIKRLDISTPISMQLDNWXNDMQ 501
LW+PD LNA + AL + S+ N +V + R+ M+ + D+Q
Sbjct: 71 LWQPDPYFLNAKVSEIA--ALNHKFSSVTLYRNKTVKYSARMHAIIACQMEFQLYPMDIQ 128
Query: 502 TC 507
C
Sbjct: 129 IC 130
>DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 469
Score = 24.6 bits (51), Expect = 1.2
Identities = 17/70 (24%), Positives = 31/70 (44%), Gaps = 3/70 (4%)
Frame = +1
Query: 337 LWRPDVVLLN--AAATTAGDYA-LRARVSNNGSVSWIKRLDISTPISMQLDNWXNDMQTC 507
+W P V + N ++A T + + + +G V RL + ++L+ + D+Q C
Sbjct: 97 IWTPTVYVSNEPSSAITGNNVKDVLVSIDPSGMVRLNTRLQATLNCGLRLEKFPFDVQEC 156
Query: 508 TFKXGSRMHN 537
S HN
Sbjct: 157 PLIFESWTHN 166
>DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chloride
channel protein.
Length = 428
Score = 23.8 bits (49), Expect = 2.1
Identities = 14/71 (19%), Positives = 30/71 (42%), Gaps = 3/71 (4%)
Frame = +1
Query: 331 ERLWRPDVVLLNAAATTAGDYALRAR---VSNNGSVSWIKRLDISTPISMQLDNWXNDMQ 501
+ +WRPD NA + T + + + ++ ++ +L + +M + +D Q
Sbjct: 116 KNMWRPDSFFKNAKSVTFQTMTIPNHYLWLYKDKTILYMVKLTLKLSCAMNFLIYPHDTQ 175
Query: 502 TCTFKXGSRMH 534
C + S H
Sbjct: 176 ECKLQMESLSH 186
>AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein.
Length = 735
Score = 22.6 bits (46), Expect = 4.7
Identities = 8/14 (57%), Positives = 10/14 (71%)
Frame = -3
Query: 318 PSAAAPLPCVPTQS 277
PSA AP+P +P S
Sbjct: 411 PSAGAPMPPIPNMS 424
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 198,686
Number of Sequences: 438
Number of extensions: 4121
Number of successful extensions: 77
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 49
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 49
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 27552579
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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