Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP03_FL5_O01
(865 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 48 8e-08
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 48 8e-08
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 48 1e-07
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 46 6e-07
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 46 6e-07
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 46 6e-07
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 46 6e-07
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 46 6e-07
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 44 1e-06
AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic ac... 44 2e-06
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 43 4e-06
DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 43 4e-06
DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 42 6e-06
AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic ac... 42 6e-06
AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic ac... 42 7e-06
DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholi... 41 2e-05
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 40 3e-05
DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholi... 39 7e-05
DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholi... 35 8e-04
DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channe... 33 0.003
DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chlor... 31 0.018
DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated... 28 0.097
DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chlor... 28 0.13
DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chlor... 27 0.29
DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated... 26 0.52
DQ435327-1|ABD92642.1| 145|Apis mellifera OBP10 protein. 25 0.90
DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated... 23 4.8
AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein. 22 8.4
AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein. 22 8.4
AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein. 22 8.4
AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein. 22 8.4
AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein. 22 8.4
AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein. 22 8.4
AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex det... 22 8.4
AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein. 22 8.4
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 48.4 bits (110), Expect = 8e-08
Identities = 27/103 (26%), Positives = 51/103 (49%), Gaps = 2/103 (1%)
Frame = +1
Query: 109 STRSSQRTIGTPPPXSKIVVNLTLHLRHANIRESESTVRIQADLQMNWIDKRLSWNAGEW 288
S + +R + ++ +TL + ++ E + A L++ W+D L WN E+
Sbjct: 65 SYNTLERPVANESEPLEVKFGITLQ-QIIDVDEKNQILTTNAWLKLEWVDYNLQWNESEY 123
Query: 289 GCST*L-VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGS 411
G L ++ +LW+PD+++ N+A G Y V++NGS
Sbjct: 124 GGVKDLRITPNKLWKPDILMYNSADEGFDGTYQTNVVVTHNGS 166
Score = 23.8 bits (49), Expect = 2.1
Identities = 9/23 (39%), Positives = 15/23 (65%)
Frame = +2
Query: 470 WPNDMQTCTFKFGSRMHNSDEMD 538
+P D Q C KFGS ++ +++D
Sbjct: 186 FPFDDQHCDMKFGSWTYDGNQVD 208
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 48.4 bits (110), Expect = 8e-08
Identities = 27/103 (26%), Positives = 51/103 (49%), Gaps = 2/103 (1%)
Frame = +1
Query: 109 STRSSQRTIGTPPPXSKIVVNLTLHLRHANIRESESTVRIQADLQMNWIDKRLSWNAGEW 288
S + +R + ++ +TL + ++ E + A L++ W+D L WN E+
Sbjct: 65 SYNTLERPVANESEPLEVKFGITLQ-QIIDVDEKNQILTTNAWLKLEWVDYNLQWNESEY 123
Query: 289 GCST*L-VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGS 411
G L ++ +LW+PD+++ N+A G Y V++NGS
Sbjct: 124 GGVKDLRITPNKLWKPDILMYNSADEGFDGTYQTNVVVTHNGS 166
Score = 23.8 bits (49), Expect = 2.1
Identities = 9/23 (39%), Positives = 15/23 (65%)
Frame = +2
Query: 470 WPNDMQTCTFKFGSRMHNSDEMD 538
+P D Q C KFGS ++ +++D
Sbjct: 186 FPFDDQHCDMKFGSWTYDGNQVD 208
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 47.6 bits (108), Expect = 1e-07
Identities = 26/98 (26%), Positives = 49/98 (50%), Gaps = 2/98 (2%)
Frame = +1
Query: 124 QRTIGTPPPXSKIVVNLTLHLRHANIRESESTVRIQADLQMNWIDKRLSWNAGEWGCST* 303
+R + ++ +TL + ++ E + A L++ W+D L WN E+G
Sbjct: 2 ERPVANESEPLEVKFGITLQ-QIIDVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKD 60
Query: 304 L-VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGS 411
L ++ +LW+PD+++ N+A G Y V++NGS
Sbjct: 61 LRITPNKLWKPDILMYNSADEGFDGTYQTSVVVTHNGS 98
Score = 23.8 bits (49), Expect = 2.1
Identities = 9/23 (39%), Positives = 15/23 (65%)
Frame = +2
Query: 470 WPNDMQTCTFKFGSRMHNSDEMD 538
+P D Q C KFGS ++ +++D
Sbjct: 118 FPFDDQHCDMKFGSWTYDGNQVD 140
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 45.6 bits (103), Expect = 6e-07
Identities = 25/98 (25%), Positives = 49/98 (50%), Gaps = 2/98 (2%)
Frame = +1
Query: 124 QRTIGTPPPXSKIVVNLTLHLRHANIRESESTVRIQADLQMNWIDKRLSWNAGEWGCST* 303
+R + ++ +TL + ++ E + A L++ W+D L WN E+G
Sbjct: 2 ERPVANESEPLEVKFGITLQ-QIIDVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKD 60
Query: 304 L-VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGS 411
L ++ +LW+PD+++ N+A G Y V+++GS
Sbjct: 61 LRITPNKLWKPDILMYNSADEGFDGTYQTSVVVTHDGS 98
Score = 23.8 bits (49), Expect = 2.1
Identities = 9/23 (39%), Positives = 15/23 (65%)
Frame = +2
Query: 470 WPNDMQTCTFKFGSRMHNSDEMD 538
+P D Q C KFGS ++ +++D
Sbjct: 118 FPFDDQHCDMKFGSWTYDGNQVD 140
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 45.6 bits (103), Expect = 6e-07
Identities = 25/98 (25%), Positives = 49/98 (50%), Gaps = 2/98 (2%)
Frame = +1
Query: 124 QRTIGTPPPXSKIVVNLTLHLRHANIRESESTVRIQADLQMNWIDKRLSWNAGEWGCST* 303
+R + ++ +TL + ++ E + A L++ W+D L WN E+G
Sbjct: 2 ERPVANESEPLEVKFGITLQ-QIIDVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKD 60
Query: 304 L-VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGS 411
L ++ +LW+PD+++ N+A G Y V+++GS
Sbjct: 61 LRITPNKLWKPDILMYNSADEGFDGTYQTSVVVTHDGS 98
Score = 23.8 bits (49), Expect = 2.1
Identities = 9/23 (39%), Positives = 15/23 (65%)
Frame = +2
Query: 470 WPNDMQTCTFKFGSRMHNSDEMD 538
+P D Q C KFGS ++ +++D
Sbjct: 118 FPFDDQHCDMKFGSWTYDGNQVD 140
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 45.6 bits (103), Expect = 6e-07
Identities = 25/98 (25%), Positives = 49/98 (50%), Gaps = 2/98 (2%)
Frame = +1
Query: 124 QRTIGTPPPXSKIVVNLTLHLRHANIRESESTVRIQADLQMNWIDKRLSWNAGEWGCST* 303
+R + ++ +TL + ++ E + A L++ W+D L WN E+G
Sbjct: 2 ERPVANESEPLEVKFGITLQ-QIIDVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKD 60
Query: 304 L-VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGS 411
L ++ +LW+PD+++ N+A G Y V+++GS
Sbjct: 61 LRITPNKLWKPDILMYNSADEGFDGTYQTSVVVTHDGS 98
Score = 23.8 bits (49), Expect = 2.1
Identities = 9/23 (39%), Positives = 15/23 (65%)
Frame = +2
Query: 470 WPNDMQTCTFKFGSRMHNSDEMD 538
+P D Q C KFGS ++ +++D
Sbjct: 118 FPFDDQHCDMKFGSWTYDGNQVD 140
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 45.6 bits (103), Expect = 6e-07
Identities = 25/98 (25%), Positives = 49/98 (50%), Gaps = 2/98 (2%)
Frame = +1
Query: 124 QRTIGTPPPXSKIVVNLTLHLRHANIRESESTVRIQADLQMNWIDKRLSWNAGEWGCST* 303
+R + ++ +TL + ++ E + A L++ W+D L WN E+G
Sbjct: 2 ERPVANESEPLEVKFGITLQ-QIIDVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKD 60
Query: 304 L-VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGS 411
L ++ +LW+PD+++ N+A G Y V+++GS
Sbjct: 61 LRITPNKLWKPDILMYNSADEGFDGTYQTSVVVTHDGS 98
Score = 23.8 bits (49), Expect = 2.1
Identities = 9/23 (39%), Positives = 15/23 (65%)
Frame = +2
Query: 470 WPNDMQTCTFKFGSRMHNSDEMD 538
+P D Q C KFGS ++ +++D
Sbjct: 118 FPFDDQHCDMKFGSWTYDGNQVD 140
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 45.6 bits (103), Expect = 6e-07
Identities = 25/98 (25%), Positives = 49/98 (50%), Gaps = 2/98 (2%)
Frame = +1
Query: 124 QRTIGTPPPXSKIVVNLTLHLRHANIRESESTVRIQADLQMNWIDKRLSWNAGEWGCST* 303
+R + ++ +TL + ++ E + A L++ W+D L WN E+G
Sbjct: 2 ERPVANESEPLEVKFGITLQ-QIIDVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKD 60
Query: 304 L-VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGS 411
L ++ +LW+PD+++ N+A G Y V+++GS
Sbjct: 61 LRITPNKLWKPDILMYNSADEGFDGTYQTSVVVTHDGS 98
Score = 24.2 bits (50), Expect = 1.6
Identities = 10/28 (35%), Positives = 17/28 (60%)
Frame = +2
Query: 455 MQLDNWPNDMQTCTFKFGSRMHNSDEMD 538
M + +P D Q C KFGS ++ +++D
Sbjct: 113 MDIAWFPFDDQHCDMKFGSWTYDGNQVD 140
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 44.4 bits (100), Expect = 1e-06
Identities = 27/98 (27%), Positives = 46/98 (46%), Gaps = 2/98 (2%)
Frame = +1
Query: 124 QRTIGTPPPXSKIVVNLTLHLRHANIRESESTVRIQADLQMNWIDKRLSWNAGEWGCST* 303
+R +G + LTL ++ ++ E + L++ W D + WN ++G
Sbjct: 39 ERPVGNESEPLVLSFGLTL-MQIIDVDEKNQLLITNLWLKLEWNDVNMRWNVSDYGGVRD 97
Query: 304 L-VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGS 411
L + RLW+PDV++ N+A G Y V NNG+
Sbjct: 98 LRIPPHRLWKPDVLMYNSADEGFDGTYPTNVVVKNNGT 135
Score = 23.4 bits (48), Expect = 2.7
Identities = 9/25 (36%), Positives = 15/25 (60%)
Frame = +2
Query: 470 WPNDMQTCTFKFGSRMHNSDEMDFR 544
+P D Q C KFGS ++ ++D +
Sbjct: 155 FPFDDQRCEMKFGSWTYDGFQLDLQ 179
>AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic
acetylcholine Apisa7-2 subunit protein.
Length = 461
Score = 43.6 bits (98), Expect = 2e-06
Identities = 27/90 (30%), Positives = 38/90 (42%), Gaps = 3/90 (3%)
Frame = +1
Query: 160 IVVNLTLHLRHANIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCST*LVSSERLWRPD 336
+V L+LH ++ E + + W D L WNA E+ G V R+WRPD
Sbjct: 33 VVFGLSLH-HIIDVDEKNQILTTNCWVTQIWTDHHLKWNASEFAGIRVIRVPYNRVWRPD 91
Query: 337 VVLLNAAATTAGDYALRAR--VSNNGSVSW 420
+L N A + VS+ G V W
Sbjct: 92 TILYNNADPQYSSAVINTNVIVSHTGEVVW 121
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 42.7 bits (96), Expect = 4e-06
Identities = 27/91 (29%), Positives = 44/91 (48%), Gaps = 3/91 (3%)
Frame = +1
Query: 157 KIVVNLTL-HLRHANIRESESTVRIQADLQMNWIDKRLSWNAGEWGCST*L-VSSERLWR 330
++ + L L L N++ T + ++ +W D +L W E+G L V S+ +WR
Sbjct: 55 RVCIKLKLSQLIDVNLKNQIMTTNLW--VEQSWYDYKLRWEPKEYGGVKMLHVPSDHIWR 112
Query: 331 PDVVLL-NAAATTAGDYALRARVSNNGSVSW 420
PD+VL NA A +A + + G V W
Sbjct: 113 PDIVLYNNADGNFEVTLATKATIYHQGLVEW 143
Score = 28.3 bits (60), Expect = 0.097
Identities = 11/30 (36%), Positives = 19/30 (63%)
Frame = +2
Query: 455 MQLDNWPNDMQTCTFKFGSRMHNSDEMDFR 544
+ ++ +P D QTC KFGS ++ ++D R
Sbjct: 155 IDVEYFPFDEQTCVLKFGSWTYDGFKVDLR 184
>DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine
receptor alpha3subunit protein.
Length = 566
Score = 42.7 bits (96), Expect = 4e-06
Identities = 22/63 (34%), Positives = 34/63 (53%), Gaps = 2/63 (3%)
Frame = +1
Query: 238 LQMNWIDKRLSWNAGEWGCST*L-VSSERLWRPDVVLL-NAAATTAGDYALRARVSNNGS 411
++ +W D +L W+ E+G L V S+ +WRPD+VL NA A +A ++ G
Sbjct: 77 VEQSWYDYKLKWDPKEYGGVEMLHVPSDHIWRPDIVLYNNADGNFEVTLATKATLNYTGR 136
Query: 412 VSW 420
V W
Sbjct: 137 VEW 139
Score = 28.7 bits (61), Expect = 0.073
Identities = 11/30 (36%), Positives = 19/30 (63%)
Frame = +2
Query: 455 MQLDNWPNDMQTCTFKFGSRMHNSDEMDFR 544
+ ++ +P D QTC KFGS ++ ++D R
Sbjct: 151 IDVEYFPFDEQTCVMKFGSWTYDGFQVDLR 180
>DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine
receptor beta1subunit protein.
Length = 520
Score = 42.3 bits (95), Expect = 6e-06
Identities = 26/94 (27%), Positives = 47/94 (50%), Gaps = 6/94 (6%)
Frame = +1
Query: 157 KIVVNLTL-HLRHANIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCST*LVSSERLWR 330
K+ VN L ++ N+ E ++ L+ W D +L W+ ++ G + +++W+
Sbjct: 51 KVHVNFGLAFVQLINVNEKNQIMKSNVWLRFIWTDYQLQWDEADYGGIGVLRLPPDKVWK 110
Query: 331 PDVVLLNAAATTAGDYALRAR----VSNNGSVSW 420
PD+VL N A G+Y +R + + NG V W
Sbjct: 111 PDIVLFNNA---DGNYEVRYKSNVLIYPNGDVLW 141
Score = 28.3 bits (60), Expect = 0.097
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = +2
Query: 470 WPNDMQTCTFKFGSRMHNSDEM 535
+P D QTC KFGS N D++
Sbjct: 158 FPFDQQTCIMKFGSWTFNGDQV 179
>AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic
acetylcholine receptorApisa2 subunit protein.
Length = 541
Score = 42.3 bits (95), Expect = 6e-06
Identities = 30/92 (32%), Positives = 44/92 (47%), Gaps = 5/92 (5%)
Frame = +1
Query: 160 IVVNLTLHLRHA---NIRESESTVRIQADLQMNWIDKRLSWNAGEWGCST*L-VSSERLW 327
+VV L L L N+++ T + L+ W D + W+ E+G T L V SE +W
Sbjct: 46 VVVKLGLRLSQLIDLNLKDQILTTNVW--LEHEWQDHKFQWDPAEYGGVTELYVPSEHIW 103
Query: 328 RPDVVLLNAAATTAGDYAL-RARVSNNGSVSW 420
PD+VL N A G + +A + G V W
Sbjct: 104 LPDIVLYNNADGEYGVTTMTKAILHYTGKVLW 135
Score = 26.6 bits (56), Expect = 0.29
Identities = 10/25 (40%), Positives = 16/25 (64%)
Frame = +2
Query: 470 WPNDMQTCTFKFGSRMHNSDEMDFR 544
+P D QTC KFGS ++ ++D +
Sbjct: 152 FPFDQQTCFMKFGSWTYDGIQIDLK 176
>AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha-3 protein.
Length = 537
Score = 41.9 bits (94), Expect = 7e-06
Identities = 25/66 (37%), Positives = 35/66 (53%), Gaps = 5/66 (7%)
Frame = +1
Query: 238 LQMNWIDKRLSWNAGEWGCST*L-VSSERLWRPDVVLLNAAATTAGDYAL----RARVSN 402
++ W D +L WN E+G L V SE +W PD+VL N A G+Y + +A +
Sbjct: 86 VEQRWNDYKLKWNPEEYGGVEMLYVPSENIWLPDIVLYNNA---DGNYEVTLMTKATLKY 142
Query: 403 NGSVSW 420
G VSW
Sbjct: 143 TGDVSW 148
Score = 27.9 bits (59), Expect = 0.13
Identities = 10/30 (33%), Positives = 19/30 (63%)
Frame = +2
Query: 455 MQLDNWPNDMQTCTFKFGSRMHNSDEMDFR 544
+ ++ +P D Q+C KFGS +N ++D +
Sbjct: 160 INVEYFPFDEQSCIMKFGSWTYNGAQVDLK 189
>DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholine
receptor alpha1subunit protein.
Length = 601
Score = 40.7 bits (91), Expect = 2e-05
Identities = 30/104 (28%), Positives = 48/104 (46%), Gaps = 6/104 (5%)
Frame = +1
Query: 127 RTIGTPPPXSKIVVNLTL-HLRHANIRESESTVRIQADLQMNWIDKRLSWNAGEWG-CST 300
R +G + + L L L N++ T + ++ W D +L WN ++G T
Sbjct: 37 RPVGNNSDRLTVKMGLRLSQLIDVNLKNQIMTTNVW--VEQEWNDYKLKWNPDDYGGVDT 94
Query: 301 *LVSSERLWRPDVVLLNAAATTAGDYAL----RARVSNNGSVSW 420
V SE +W PD+VL N A G+Y + +A + + G V W
Sbjct: 95 LHVPSEHIWLPDIVLYNNA---DGNYEVTIMTKAILHHTGKVVW 135
Score = 26.6 bits (56), Expect = 0.29
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = +2
Query: 455 MQLDNWPNDMQTCTFKFGSRMHNSDEMDFR 544
+ ++ +P D QTC KFGS ++ +D R
Sbjct: 147 IDVEYFPFDEQTCFMKFGSWTYDGYTVDLR 176
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 39.9 bits (89), Expect = 3e-05
Identities = 29/94 (30%), Positives = 47/94 (50%), Gaps = 6/94 (6%)
Frame = +1
Query: 157 KIVVNLTL-HLRHANIRESESTVRIQADLQMNWIDKRLSWNAGEWGCST*L-VSSERLWR 330
++ + L L L N++ T + ++ +W D +L W E+G L V S+ +WR
Sbjct: 55 RVCIKLKLSQLIDVNLKNQIMTTNLW--VEQSWYDYKLRWEPKEYGGVKMLHVPSDHIWR 112
Query: 331 PDVVLLNAAATTAGDYAL----RARVSNNGSVSW 420
PD+VL N A G+Y + +A V +G V W
Sbjct: 113 PDIVLYNNA---DGNYEVTLMTKATVYYSGLVVW 143
Score = 28.7 bits (61), Expect = 0.073
Identities = 11/31 (35%), Positives = 20/31 (64%)
Frame = +2
Query: 452 SMQLDNWPNDMQTCTFKFGSRMHNSDEMDFR 544
S+ ++ +P D+QTC K GS ++ ++D R
Sbjct: 154 SIDVEFFPYDVQTCVLKLGSWTYDGFKVDLR 184
>DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholine
receptor beta2subunit protein.
Length = 427
Score = 38.7 bits (86), Expect = 7e-05
Identities = 18/69 (26%), Positives = 34/69 (49%), Gaps = 1/69 (1%)
Frame = +1
Query: 142 PPPXSKIVVNLTLHLRHANIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCST*LVSSE 318
P + ++ L ++H N+ E TV L++ W L+W + E+ ++ V S
Sbjct: 54 PEQKNATKIDFGLSIQHYNVDEYSHTVDFHVMLKLMWEQSHLTWKSSEFDSINSIRVKSY 113
Query: 319 RLWRPDVVL 345
+W PD+V+
Sbjct: 114 EIWVPDIVM 122
Score = 25.4 bits (53), Expect = 0.68
Identities = 9/22 (40%), Positives = 12/22 (54%)
Frame = +2
Query: 470 WPNDMQTCTFKFGSRMHNSDEM 535
WP D+ CT S H S+E+
Sbjct: 166 WPYDILNCTIHIASWSHGSNEI 187
>DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholine
receptor alpha9subunit protein.
Length = 431
Score = 35.1 bits (77), Expect = 8e-04
Identities = 26/105 (24%), Positives = 48/105 (45%), Gaps = 6/105 (5%)
Frame = +1
Query: 142 PPPXSKIVVNLTLHL--RHANIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCST*LVS 312
P +I N+T+ L + + S + + + + + W D LSW ++ G + V
Sbjct: 61 PISSHQIANNVTMQLLPKLMEFDDWTSVMELHSWMTLMWTDSHLSWKPSDFDGINYIYVK 120
Query: 313 SERLWRPDVVLLNAAATT---AGDYALRARVSNNGSVSWDKALGH 438
S+ +W PD+ + N+ T G V ++GSVS ++ H
Sbjct: 121 SDDIWVPDISVYNSGDMTFDQTGIPPTTCLVFSSGSVSCVPSVKH 165
Score = 28.7 bits (61), Expect = 0.073
Identities = 9/24 (37%), Positives = 15/24 (62%)
Frame = +2
Query: 467 NWPNDMQTCTFKFGSRMHNSDEMD 538
+WP D C FGS +H+ +E++
Sbjct: 175 SWPYDTHRCRINFGSWVHSGEEVN 198
>DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channel
protein.
Length = 463
Score = 33.5 bits (73), Expect = 0.003
Identities = 13/51 (25%), Positives = 26/51 (50%)
Frame = +1
Query: 199 IRESESTVRIQADLQMNWIDKRLSWNAGEWGCST*LVSSERLWRPDVVLLN 351
I E + T + + +W+D+RL++ G+ + + R+W+PD N
Sbjct: 44 ISEVDMTYSMDCYFRQSWVDRRLAFQGGKETLALSISMLARIWKPDTYFYN 94
Score = 30.3 bits (65), Expect = 0.024
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = +2
Query: 428 RLDISTPISMQLDNWPNDMQTCTFKFGS 511
RL I M L+N+P D Q C +FGS
Sbjct: 123 RLTIKAGCPMNLENFPMDTQRCPLQFGS 150
>DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 30.7 bits (66), Expect = 0.018
Identities = 19/66 (28%), Positives = 32/66 (48%), Gaps = 3/66 (4%)
Frame = +1
Query: 163 VVNLTLHLRH-ANIRESESTVRIQADLQMNWIDKRLSWN--AGEWGCST*LVSSERLWRP 333
+V + L +R A I + + +Q + W+D+RL +N G T L + R+W P
Sbjct: 60 IVRVNLFVRSIATISDIKMEYSVQLTFREQWLDERLRFNDFGGRLKYLT-LTDASRVWMP 118
Query: 334 DVVLLN 351
D+ N
Sbjct: 119 DLFFSN 124
>DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 510
Score = 28.3 bits (60), Expect = 0.097
Identities = 14/51 (27%), Positives = 22/51 (43%)
Frame = +1
Query: 199 IRESESTVRIQADLQMNWIDKRLSWNAGEWGCST*LVSSERLWRPDVVLLN 351
+ E + + + +W D RLS+ S + ER+WRPD N
Sbjct: 76 VSELDMDYSMDCYFRQSWRDSRLSFLGPIKSLSLSIKMLERIWRPDTYFYN 126
Score = 26.6 bits (56), Expect = 0.29
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = +2
Query: 428 RLDISTPISMQLDNWPNDMQTCTFKFGS 511
RL I M+L N+P D Q+C GS
Sbjct: 155 RLTIKAKCPMELRNFPMDRQSCPLILGS 182
>DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chloride
channel protein.
Length = 428
Score = 27.9 bits (59), Expect = 0.13
Identities = 12/39 (30%), Positives = 20/39 (51%)
Frame = +2
Query: 428 RLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEMDFR 544
+L + +M +P+D Q C + S H +DEM F+
Sbjct: 156 KLTLKLSCAMNFLIYPHDTQECKLQMESLSHTTDEMIFQ 194
>DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chloride
channel protein.
Length = 383
Score = 26.6 bits (56), Expect = 0.29
Identities = 9/40 (22%), Positives = 22/40 (55%)
Frame = +2
Query: 422 IKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEMDF 541
+ +L + +M+ +++P+D Q C+ S H + ++ F
Sbjct: 123 MSKLTLVLSCAMKFESYPHDTQICSMMIESLSHTTQDLVF 162
>DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 469
Score = 25.8 bits (54), Expect = 0.52
Identities = 12/36 (33%), Positives = 19/36 (52%)
Frame = +2
Query: 428 RLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEM 535
RL + ++L+ +P D+Q C F S HN +M
Sbjct: 135 RLQATLNCGLRLEKFPFDVQECPLIFESWTHNVLDM 170
>DQ435327-1|ABD92642.1| 145|Apis mellifera OBP10 protein.
Length = 145
Score = 25.0 bits (52), Expect = 0.90
Identities = 15/36 (41%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Frame = +3
Query: 24 YIILLPFLLTCAIAS-AAECENATSLSLMIDSLLAT 128
Y ILL L+TC I S + C T S + D ++AT
Sbjct: 3 YSILLSLLITCLICSPSVHC--GTRPSFVSDEMIAT 36
>DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 391
Score = 22.6 bits (46), Expect = 4.8
Identities = 16/71 (22%), Positives = 32/71 (45%), Gaps = 6/71 (8%)
Frame = +1
Query: 160 IVVNLTLHLRHAN-IRESESTVRIQADLQMNWIDKRLS-----WNAGEWGCST*LVSSER 321
++V+ + + N I + R+ ++ +WI+ RL + G+ + +
Sbjct: 11 VLVDFNIFVADINSINVEDMDFRVDMFVRQSWIESRLDMPDYIFEEGDDYVTLPPEFFDS 70
Query: 322 LWRPDVVLLNA 354
LW+PD LNA
Sbjct: 71 LWQPDPYFLNA 81
>AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.8 bits (44), Expect = 8.4
Identities = 25/101 (24%), Positives = 42/101 (41%), Gaps = 1/101 (0%)
Frame = -1
Query: 538 IHFVTIVHPRTELERASLHVVGPI-V*LHRNWSANVQALYPRRRSRY*IHGRGERSPRRW 362
IH V P T + ++ P V L R + ++ R + ++ E + R
Sbjct: 132 IHRVLPGKPTTTSDELKRDIINPEDVMLKRRTGEGSKPIFEREEIKNILNKTNEITEHRT 191
Query: 361 LQPRLAVPRQASTSVPRTPAKCCSPTPLRSNSVVCRSNSFE 239
+ LAV + S + +T C + SNS+ RS SF+
Sbjct: 192 V---LAVNIEKSENETKT----CKKYAISSNSLRSRSRSFQ 225
>AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.8 bits (44), Expect = 8.4
Identities = 25/101 (24%), Positives = 42/101 (41%), Gaps = 1/101 (0%)
Frame = -1
Query: 538 IHFVTIVHPRTELERASLHVVGPI-V*LHRNWSANVQALYPRRRSRY*IHGRGERSPRRW 362
IH V P T + ++ P V L R + ++ R + ++ E + R
Sbjct: 132 IHRVLPGKPTTTSDELKRDIINPEDVMLKRRTGEGSKPIFEREEIKNILNKTNEITEHRT 191
Query: 361 LQPRLAVPRQASTSVPRTPAKCCSPTPLRSNSVVCRSNSFE 239
+ LAV + S + +T C + SNS+ RS SF+
Sbjct: 192 V---LAVNIEKSENETKT----CKKYAISSNSLRSRSRSFQ 225
>AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.8 bits (44), Expect = 8.4
Identities = 25/101 (24%), Positives = 42/101 (41%), Gaps = 1/101 (0%)
Frame = -1
Query: 538 IHFVTIVHPRTELERASLHVVGPI-V*LHRNWSANVQALYPRRRSRY*IHGRGERSPRRW 362
IH V P T + ++ P V L R + ++ R + ++ E + R
Sbjct: 132 IHRVLPGKPTTTSDELKRDIINPEDVMLKRRTGEGSKPIFEREEIKNILNKTNEITEHRT 191
Query: 361 LQPRLAVPRQASTSVPRTPAKCCSPTPLRSNSVVCRSNSFE 239
+ LAV + S + +T C + SNS+ RS SF+
Sbjct: 192 V---LAVNIEKSENETKT----CKKYAISSNSLRSRSRSFQ 225
>AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.8 bits (44), Expect = 8.4
Identities = 25/101 (24%), Positives = 42/101 (41%), Gaps = 1/101 (0%)
Frame = -1
Query: 538 IHFVTIVHPRTELERASLHVVGPI-V*LHRNWSANVQALYPRRRSRY*IHGRGERSPRRW 362
IH V P T + ++ P V L R + ++ R + ++ E + R
Sbjct: 132 IHRVLPGKPTTTSDELKRDIINPEDVMLKRRTGEGSKPIFEREEIKNILNKTNEITEHRT 191
Query: 361 LQPRLAVPRQASTSVPRTPAKCCSPTPLRSNSVVCRSNSFE 239
+ LAV + S + +T C + SNS+ RS SF+
Sbjct: 192 V---LAVNIEKSENETKT----CKKYAISSNSLRSRSRSFQ 225
>AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.8 bits (44), Expect = 8.4
Identities = 25/101 (24%), Positives = 42/101 (41%), Gaps = 1/101 (0%)
Frame = -1
Query: 538 IHFVTIVHPRTELERASLHVVGPI-V*LHRNWSANVQALYPRRRSRY*IHGRGERSPRRW 362
IH V P T + ++ P V L R + ++ R + ++ E + R
Sbjct: 132 IHRVLPGKPTTTSDELKRDIINPEDVMLKRRTGEGSKPIFEREEIKNILNKTNEITEHRT 191
Query: 361 LQPRLAVPRQASTSVPRTPAKCCSPTPLRSNSVVCRSNSFE 239
+ LAV + S + +T C + SNS+ RS SF+
Sbjct: 192 V---LAVNIEKSENETKT----CKKYAISSNSLRSRSRSFQ 225
>AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein.
Length = 400
Score = 21.8 bits (44), Expect = 8.4
Identities = 25/101 (24%), Positives = 42/101 (41%), Gaps = 1/101 (0%)
Frame = -1
Query: 538 IHFVTIVHPRTELERASLHVVGPI-V*LHRNWSANVQALYPRRRSRY*IHGRGERSPRRW 362
IH V P T + ++ P V L R + ++ R + ++ E + R
Sbjct: 132 IHRVLPGKPTTTSDELKRDIINPEDVMLKRRTGEGSKPIFEREEIKNILNKTNEITEHRT 191
Query: 361 LQPRLAVPRQASTSVPRTPAKCCSPTPLRSNSVVCRSNSFE 239
+ LAV + S + +T C + SNS+ RS SF+
Sbjct: 192 V---LAVNIEKSENETKT----CKKYAISSNSLRSRSRSFQ 225
>AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex
determiner protein.
Length = 401
Score = 21.8 bits (44), Expect = 8.4
Identities = 25/101 (24%), Positives = 42/101 (41%), Gaps = 1/101 (0%)
Frame = -1
Query: 538 IHFVTIVHPRTELERASLHVVGPI-V*LHRNWSANVQALYPRRRSRY*IHGRGERSPRRW 362
IH V P T + ++ P V L R + ++ R + ++ E + R
Sbjct: 132 IHRVLPGKPTTTSDELKRDIINPEDVMLKRRTGEGSKPIFEREEIKNILNKTNEITEHRT 191
Query: 361 LQPRLAVPRQASTSVPRTPAKCCSPTPLRSNSVVCRSNSFE 239
+ LAV + S + +T C + SNS+ RS SF+
Sbjct: 192 V---LAVNIEKSENETKT----CKKYAISSNSLRSRSRSFQ 225
>AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein.
Length = 898
Score = 21.8 bits (44), Expect = 8.4
Identities = 16/54 (29%), Positives = 25/54 (46%), Gaps = 2/54 (3%)
Frame = -2
Query: 630 SLGXAPAXDQSR-HIPT-LATXTYCIFXCQSRKSISSLLCILEPNLNVQVCMSL 475
S+ P+ D+S H + LA + I C S+ C L PN + VC+ +
Sbjct: 54 SMTIPPSIDRSSIHEESYLAESSRSIDPCASKYCGIGKECELSPNSTIAVCVCM 107
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 219,042
Number of Sequences: 438
Number of extensions: 4687
Number of successful extensions: 79
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 41
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 62
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 27916710
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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