Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP03_FL5_N18
(932 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholi... 35 0.001
DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholi... 32 0.009
DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channe... 30 0.026
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 30 0.026
DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 29 0.046
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 29 0.060
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 29 0.060
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 29 0.080
DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholi... 28 0.14
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 27 0.18
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 27 0.18
DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 27 0.18
AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic ac... 27 0.18
AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic ac... 27 0.24
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 27 0.32
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 27 0.32
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 27 0.32
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 27 0.32
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 27 0.32
DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated... 27 0.32
DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated... 27 0.32
DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chlor... 26 0.43
DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chlor... 25 0.74
AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic ac... 25 0.98
DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chlor... 25 1.3
DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chlor... 23 3.0
AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein. 23 4.0
>DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholine
receptor alpha9subunit protein.
Length = 431
Score = 35.1 bits (77), Expect = 0.001
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = +1
Query: 502 NWPNDMQTCTFKFGSGMHNSDEMDSVIDKK 591
+WP D C FGS +H+ +E++ +DKK
Sbjct: 175 SWPYDTHRCRINFGSWVHSGEEVNIFLDKK 204
>DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholine
receptor beta2subunit protein.
Length = 427
Score = 31.9 bits (69), Expect = 0.009
Identities = 20/72 (27%), Positives = 33/72 (45%), Gaps = 5/72 (6%)
Frame = +2
Query: 113 CENATSLSLMIDS---LLATYDREPPPXSKIV--VNLTLHLRHANIRESESTVRILADLQ 277
C++ TS S + L YDR+ P K ++ L ++H N+ E TV L+
Sbjct: 28 CKDITSTSALYRLKLYLFCDYDRDIIPEQKNATKIDFGLSIQHYNVDEYSHTVDFHVMLK 87
Query: 278 MNWIDKRLSWNA 313
+ W L+W +
Sbjct: 88 LMWEQSHLTWKS 99
Score = 25.8 bits (54), Expect = 0.56
Identities = 9/22 (40%), Positives = 12/22 (54%)
Frame = +1
Query: 505 WPNDMQTCTFKFGSGMHNSDEM 570
WP D+ CT S H S+E+
Sbjct: 166 WPYDILNCTIHIASWSHGSNEI 187
>DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channel
protein.
Length = 463
Score = 30.3 bits (65), Expect = 0.026
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = +1
Query: 463 RLDISTPISMQLDNWPNDMQTCTFKFGS 546
RL I M L+N+P D Q C +FGS
Sbjct: 123 RLTIKAGCPMNLENFPMDTQRCPLQFGS 150
Score = 29.9 bits (64), Expect = 0.035
Identities = 18/70 (25%), Positives = 35/70 (50%), Gaps = 4/70 (5%)
Frame = +2
Query: 119 NATSLSLMIDSLLATYDREPPPX---SKIVVNLTLHLRHAN-IRESESTVRILADLQMNW 286
N +++S ++D+LL YD P V + + +R I E + T + + +W
Sbjct: 2 NHSNISELLDNLLRGYDNSVRPDFGGPPATVEVDIMVRSMGPISEVDMTYSMDCYFRQSW 61
Query: 287 IDKRLSWNAG 316
+D+RL++ G
Sbjct: 62 VDRRLAFQGG 71
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 30.3 bits (65), Expect = 0.026
Identities = 14/36 (38%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Frame = +3
Query: 342 VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGS 446
+ RLW+PDV++ N+A G Y V NNG+
Sbjct: 100 IPPHRLWKPDVLMYNSADEGFDGTYPTNVVVKNNGT 135
Score = 23.4 bits (48), Expect = 3.0
Identities = 9/23 (39%), Positives = 14/23 (60%)
Frame = +1
Query: 505 WPNDMQTCTFKFGSGMHNSDEMD 573
+P D Q C KFGS ++ ++D
Sbjct: 155 FPFDDQRCEMKFGSWTYDGFQLD 177
>DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine
receptor beta1subunit protein.
Length = 520
Score = 29.5 bits (63), Expect = 0.046
Identities = 13/31 (41%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
Frame = +1
Query: 505 WPNDMQTCTFKFGSGMHNSDEMD-SVIDKKN 594
+P D QTC KFGS N D++ ++ + KN
Sbjct: 158 FPFDQQTCIMKFGSWTFNGDQVSLALYNNKN 188
Score = 25.0 bits (52), Expect = 0.98
Identities = 10/24 (41%), Positives = 17/24 (70%)
Frame = +3
Query: 351 ERLWRPDVVLLNAAATTAGDYALR 422
+++W+PD+VL N A G+Y +R
Sbjct: 106 DKVWKPDIVLFNNA---DGNYEVR 126
Score = 23.8 bits (49), Expect = 2.3
Identities = 15/53 (28%), Positives = 26/53 (49%), Gaps = 4/53 (7%)
Frame = +2
Query: 191 KIVVNLTL-HLRHANIRESESTVRILADLQMNWIDKRLSWNA---GGMGLQHL 337
K+ VN L ++ N+ E ++ L+ W D +L W+ GG+G+ L
Sbjct: 51 KVHVNFGLAFVQLINVNEKNQIMKSNVWLRFIWTDYQLQWDEADYGGIGVLRL 103
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 29.1 bits (62), Expect = 0.060
Identities = 12/36 (33%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Frame = +3
Query: 342 VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGS 446
++ +LW+PD+++ N+A G Y V++NGS
Sbjct: 131 ITPNKLWKPDILMYNSADEGFDGTYQTNVVVTHNGS 166
Score = 26.2 bits (55), Expect = 0.43
Identities = 10/29 (34%), Positives = 18/29 (62%)
Frame = +1
Query: 505 WPNDMQTCTFKFGSGMHNSDEMDSVIDKK 591
+P D Q C KFGS ++ +++D V+ +
Sbjct: 186 FPFDDQHCDMKFGSWTYDGNQVDLVLSSE 214
Score = 24.6 bits (51), Expect = 1.3
Identities = 15/67 (22%), Positives = 31/67 (46%), Gaps = 5/67 (7%)
Frame = +2
Query: 140 MIDSLLATYDREPPPXSK----IVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLS 304
+++ LL++Y+ P + + V + L+ ++ E + A L++ W+D L
Sbjct: 58 LLNELLSSYNTLERPVANESEPLEVKFGITLQQIIDVDEKNQILTTNAWLKLEWVDYNLQ 117
Query: 305 WNAGGMG 325
WN G
Sbjct: 118 WNESEYG 124
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 29.1 bits (62), Expect = 0.060
Identities = 12/36 (33%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Frame = +3
Query: 342 VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGS 446
++ +LW+PD+++ N+A G Y V++NGS
Sbjct: 131 ITPNKLWKPDILMYNSADEGFDGTYQTNVVVTHNGS 166
Score = 26.2 bits (55), Expect = 0.43
Identities = 10/29 (34%), Positives = 18/29 (62%)
Frame = +1
Query: 505 WPNDMQTCTFKFGSGMHNSDEMDSVIDKK 591
+P D Q C KFGS ++ +++D V+ +
Sbjct: 186 FPFDDQHCDMKFGSWTYDGNQVDLVLSSE 214
Score = 24.6 bits (51), Expect = 1.3
Identities = 15/67 (22%), Positives = 31/67 (46%), Gaps = 5/67 (7%)
Frame = +2
Query: 140 MIDSLLATYDREPPPXSK----IVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLS 304
+++ LL++Y+ P + + V + L+ ++ E + A L++ W+D L
Sbjct: 58 LLNELLSSYNTLERPVANESEPLEVKFGITLQQIIDVDEKNQILTTNAWLKLEWVDYNLQ 117
Query: 305 WNAGGMG 325
WN G
Sbjct: 118 WNESEYG 124
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 28.7 bits (61), Expect = 0.080
Identities = 12/36 (33%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Frame = +3
Query: 342 VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGS 446
++ +LW+PD+++ N+A G Y V++NGS
Sbjct: 63 ITPNKLWKPDILMYNSADEGFDGTYQTSVVVTHNGS 98
Score = 26.2 bits (55), Expect = 0.43
Identities = 10/29 (34%), Positives = 18/29 (62%)
Frame = +1
Query: 505 WPNDMQTCTFKFGSGMHNSDEMDSVIDKK 591
+P D Q C KFGS ++ +++D V+ +
Sbjct: 118 FPFDDQHCDMKFGSWTYDGNQVDLVLSSE 146
Score = 24.2 bits (50), Expect = 1.7
Identities = 9/32 (28%), Positives = 15/32 (46%)
Frame = +2
Query: 230 NIRESESTVRILADLQMNWIDKRLSWNAGGMG 325
++ E + A L++ W+D L WN G
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYG 56
>DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholine
receptor alpha1subunit protein.
Length = 601
Score = 27.9 bits (59), Expect = 0.14
Identities = 12/23 (52%), Positives = 14/23 (60%)
Frame = +3
Query: 324 GCSTWLVSSERLWRPDVVLLNAA 392
G T V SE +W PD+VL N A
Sbjct: 91 GVDTLHVPSEHIWLPDIVLYNNA 113
Score = 25.0 bits (52), Expect = 0.98
Identities = 10/28 (35%), Positives = 17/28 (60%)
Frame = +1
Query: 490 MQLDNWPNDMQTCTFKFGSGMHNSDEMD 573
+ ++ +P D QTC KFGS ++ +D
Sbjct: 147 IDVEYFPFDEQTCFMKFGSWTYDGYTVD 174
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 27.5 bits (58), Expect = 0.18
Identities = 10/17 (58%), Positives = 13/17 (76%)
Frame = +3
Query: 342 VSSERLWRPDVVLLNAA 392
V S+ +WRPD+VL N A
Sbjct: 105 VPSDHIWRPDIVLYNNA 121
Score = 27.1 bits (57), Expect = 0.24
Identities = 10/29 (34%), Positives = 19/29 (65%)
Frame = +1
Query: 487 SMQLDNWPNDMQTCTFKFGSGMHNSDEMD 573
S+ ++ +P D+QTC K GS ++ ++D
Sbjct: 154 SIDVEFFPYDVQTCVLKLGSWTYDGFKVD 182
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 27.5 bits (58), Expect = 0.18
Identities = 10/17 (58%), Positives = 13/17 (76%)
Frame = +3
Query: 342 VSSERLWRPDVVLLNAA 392
V S+ +WRPD+VL N A
Sbjct: 105 VPSDHIWRPDIVLYNNA 121
Score = 26.6 bits (56), Expect = 0.32
Identities = 10/28 (35%), Positives = 18/28 (64%)
Frame = +1
Query: 490 MQLDNWPNDMQTCTFKFGSGMHNSDEMD 573
+ ++ +P D QTC KFGS ++ ++D
Sbjct: 155 IDVEYFPFDEQTCVLKFGSWTYDGFKVD 182
>DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine
receptor alpha3subunit protein.
Length = 566
Score = 27.5 bits (58), Expect = 0.18
Identities = 10/17 (58%), Positives = 13/17 (76%)
Frame = +3
Query: 342 VSSERLWRPDVVLLNAA 392
V S+ +WRPD+VL N A
Sbjct: 101 VPSDHIWRPDIVLYNNA 117
Score = 27.1 bits (57), Expect = 0.24
Identities = 10/28 (35%), Positives = 18/28 (64%)
Frame = +1
Query: 490 MQLDNWPNDMQTCTFKFGSGMHNSDEMD 573
+ ++ +P D QTC KFGS ++ ++D
Sbjct: 151 IDVEYFPFDEQTCVMKFGSWTYDGFQVD 178
>AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha-3 protein.
Length = 537
Score = 27.5 bits (58), Expect = 0.18
Identities = 10/28 (35%), Positives = 18/28 (64%)
Frame = +1
Query: 490 MQLDNWPNDMQTCTFKFGSGMHNSDEMD 573
+ ++ +P D Q+C KFGS +N ++D
Sbjct: 160 INVEYFPFDEQSCIMKFGSWTYNGAQVD 187
Score = 26.2 bits (55), Expect = 0.43
Identities = 11/23 (47%), Positives = 13/23 (56%)
Frame = +3
Query: 324 GCSTWLVSSERLWRPDVVLLNAA 392
G V SE +W PD+VL N A
Sbjct: 104 GVEMLYVPSENIWLPDIVLYNNA 126
>AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic
acetylcholine receptorApisa2 subunit protein.
Length = 541
Score = 27.1 bits (57), Expect = 0.24
Identities = 14/26 (53%), Positives = 17/26 (65%), Gaps = 1/26 (3%)
Frame = +3
Query: 318 EWGCSTWL-VSSERLWRPDVVLLNAA 392
E+G T L V SE +W PD+VL N A
Sbjct: 88 EYGGVTELYVPSEHIWLPDIVLYNNA 113
Score = 26.2 bits (55), Expect = 0.43
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = +1
Query: 505 WPNDMQTCTFKFGSGMHNSDEMD 573
+P D QTC KFGS ++ ++D
Sbjct: 152 FPFDQQTCFMKFGSWTYDGIQID 174
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 26.6 bits (56), Expect = 0.32
Identities = 11/36 (30%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Frame = +3
Query: 342 VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGS 446
++ +LW+PD+++ N+A G Y V+++GS
Sbjct: 63 ITPNKLWKPDILMYNSADEGFDGTYQTSVVVTHDGS 98
Score = 26.2 bits (55), Expect = 0.43
Identities = 10/29 (34%), Positives = 18/29 (62%)
Frame = +1
Query: 505 WPNDMQTCTFKFGSGMHNSDEMDSVIDKK 591
+P D Q C KFGS ++ +++D V+ +
Sbjct: 118 FPFDDQHCDMKFGSWTYDGNQVDLVLSSE 146
Score = 24.2 bits (50), Expect = 1.7
Identities = 9/32 (28%), Positives = 15/32 (46%)
Frame = +2
Query: 230 NIRESESTVRILADLQMNWIDKRLSWNAGGMG 325
++ E + A L++ W+D L WN G
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYG 56
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 26.6 bits (56), Expect = 0.32
Identities = 11/36 (30%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Frame = +3
Query: 342 VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGS 446
++ +LW+PD+++ N+A G Y V+++GS
Sbjct: 63 ITPNKLWKPDILMYNSADEGFDGTYQTSVVVTHDGS 98
Score = 26.2 bits (55), Expect = 0.43
Identities = 10/29 (34%), Positives = 18/29 (62%)
Frame = +1
Query: 505 WPNDMQTCTFKFGSGMHNSDEMDSVIDKK 591
+P D Q C KFGS ++ +++D V+ +
Sbjct: 118 FPFDDQHCDMKFGSWTYDGNQVDLVLSSE 146
Score = 24.2 bits (50), Expect = 1.7
Identities = 9/32 (28%), Positives = 15/32 (46%)
Frame = +2
Query: 230 NIRESESTVRILADLQMNWIDKRLSWNAGGMG 325
++ E + A L++ W+D L WN G
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYG 56
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 26.6 bits (56), Expect = 0.32
Identities = 11/36 (30%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Frame = +3
Query: 342 VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGS 446
++ +LW+PD+++ N+A G Y V+++GS
Sbjct: 63 ITPNKLWKPDILMYNSADEGFDGTYQTSVVVTHDGS 98
Score = 26.2 bits (55), Expect = 0.43
Identities = 10/29 (34%), Positives = 18/29 (62%)
Frame = +1
Query: 505 WPNDMQTCTFKFGSGMHNSDEMDSVIDKK 591
+P D Q C KFGS ++ +++D V+ +
Sbjct: 118 FPFDDQHCDMKFGSWTYDGNQVDLVLSSE 146
Score = 24.2 bits (50), Expect = 1.7
Identities = 9/32 (28%), Positives = 15/32 (46%)
Frame = +2
Query: 230 NIRESESTVRILADLQMNWIDKRLSWNAGGMG 325
++ E + A L++ W+D L WN G
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYG 56
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 26.6 bits (56), Expect = 0.32
Identities = 11/36 (30%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Frame = +3
Query: 342 VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGS 446
++ +LW+PD+++ N+A G Y V+++GS
Sbjct: 63 ITPNKLWKPDILMYNSADEGFDGTYQTSVVVTHDGS 98
Score = 26.2 bits (55), Expect = 0.43
Identities = 10/29 (34%), Positives = 18/29 (62%)
Frame = +1
Query: 505 WPNDMQTCTFKFGSGMHNSDEMDSVIDKK 591
+P D Q C KFGS ++ +++D V+ +
Sbjct: 118 FPFDDQHCDMKFGSWTYDGNQVDLVLSSE 146
Score = 24.2 bits (50), Expect = 1.7
Identities = 9/32 (28%), Positives = 15/32 (46%)
Frame = +2
Query: 230 NIRESESTVRILADLQMNWIDKRLSWNAGGMG 325
++ E + A L++ W+D L WN G
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYG 56
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 26.6 bits (56), Expect = 0.32
Identities = 11/36 (30%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Frame = +3
Query: 342 VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGS 446
++ +LW+PD+++ N+A G Y V+++GS
Sbjct: 63 ITPNKLWKPDILMYNSADEGFDGTYQTSVVVTHDGS 98
Score = 26.6 bits (56), Expect = 0.32
Identities = 11/34 (32%), Positives = 20/34 (58%)
Frame = +1
Query: 490 MQLDNWPNDMQTCTFKFGSGMHNSDEMDSVIDKK 591
M + +P D Q C KFGS ++ +++D V+ +
Sbjct: 113 MDIAWFPFDDQHCDMKFGSWTYDGNQVDLVLSSE 146
Score = 24.2 bits (50), Expect = 1.7
Identities = 9/32 (28%), Positives = 15/32 (46%)
Frame = +2
Query: 230 NIRESESTVRILADLQMNWIDKRLSWNAGGMG 325
++ E + A L++ W+D L WN G
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYG 56
>DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 469
Score = 26.6 bits (56), Expect = 0.32
Identities = 14/45 (31%), Positives = 23/45 (51%)
Frame = +1
Query: 463 RLDISTPISMQLDNWPNDMQTCTFKFGSGMHNSDEMDSVIDKKNI 597
RL + ++L+ +P D+Q C F S HN +M D++ I
Sbjct: 135 RLQATLNCGLRLEKFPFDVQECPLIFESWTHNVLDMVLYWDQEPI 179
>DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 510
Score = 26.6 bits (56), Expect = 0.32
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = +1
Query: 463 RLDISTPISMQLDNWPNDMQTCTFKFGS 546
RL I M+L N+P D Q+C GS
Sbjct: 155 RLTIKAKCPMELRNFPMDRQSCPLILGS 182
Score = 22.2 bits (45), Expect = 6.9
Identities = 7/12 (58%), Positives = 8/12 (66%)
Frame = +3
Query: 351 ERLWRPDVVLLN 386
ER+WRPD N
Sbjct: 115 ERIWRPDTYFYN 126
>DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 26.2 bits (55), Expect = 0.43
Identities = 18/73 (24%), Positives = 35/73 (47%), Gaps = 7/73 (9%)
Frame = +2
Query: 140 MIDSLLATYDREPPPXSK------IVVNLTLHLRH-ANIRESESTVRILADLQMNWIDKR 298
++D++L YD P + +V + L +R A I + + + + W+D+R
Sbjct: 35 VLDNILGGYDARIRPSGENATDGPAIVRVNLFVRSIATISDIKMEYSVQLTFREQWLDER 94
Query: 299 LSWNAGGMGLQHL 337
L +N G L++L
Sbjct: 95 LRFNDFGGRLKYL 107
>DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chloride
channel protein.
Length = 428
Score = 25.4 bits (53), Expect = 0.74
Identities = 11/36 (30%), Positives = 18/36 (50%)
Frame = +1
Query: 463 RLDISTPISMQLDNWPNDMQTCTFKFGSGMHNSDEM 570
+L + +M +P+D Q C + S H +DEM
Sbjct: 156 KLTLKLSCAMNFLIYPHDTQECKLQMESLSHTTDEM 191
>AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic
acetylcholine Apisa7-2 subunit protein.
Length = 461
Score = 25.0 bits (52), Expect = 0.98
Identities = 9/24 (37%), Positives = 15/24 (62%)
Frame = -1
Query: 599 CIFFLSITESISSLLCIPEPNLNV 528
C+FFL+ S + +LC P+ N+
Sbjct: 434 CVFFLTTIVSTTVILCGSPPSANI 457
Score = 24.2 bits (50), Expect = 1.7
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = +3
Query: 342 VSSERLWRPDVVLLNAA 392
V R+WRPD +L N A
Sbjct: 82 VPYNRVWRPDTILYNNA 98
>DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chloride
channel protein.
Length = 383
Score = 24.6 bits (51), Expect = 1.3
Identities = 8/38 (21%), Positives = 21/38 (55%)
Frame = +1
Query: 457 IKRLDISTPISMQLDNWPNDMQTCTFKFGSGMHNSDEM 570
+ +L + +M+ +++P+D Q C+ S H + ++
Sbjct: 123 MSKLTLVLSCAMKFESYPHDTQICSMMIESLSHTTQDL 160
>DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 23.4 bits (48), Expect = 3.0
Identities = 17/73 (23%), Positives = 34/73 (46%), Gaps = 7/73 (9%)
Frame = +2
Query: 140 MIDSLLATYDREPPPXSK------IVVNLTLHLRH-ANIRESESTVRILADLQMNWIDKR 298
++D++L YD P + VV + + +R + I + + + W+D+R
Sbjct: 35 VLDNILGGYDARIRPSGENATDGPAVVRVNIFVRSISKIDDVTMEYSVQLTFREQWLDER 94
Query: 299 LSWNAGGMGLQHL 337
L +N G L++L
Sbjct: 95 LRFNDFGGRLKYL 107
>AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein.
Length = 898
Score = 23.0 bits (47), Expect = 4.0
Identities = 11/34 (32%), Positives = 18/34 (52%)
Frame = +1
Query: 508 PNDMQTCTFKFGSGMHNSDEMDSVIDKKNIQYVR 609
P D++ FK+G H + +D KN++Y R
Sbjct: 655 PQDIENI-FKYGYVSHANQRNMYKLDLKNMKYTR 687
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 219,086
Number of Sequences: 438
Number of extensions: 5141
Number of successful extensions: 66
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 35
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 66
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 30476628
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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