Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP03_FL5_N12
(909 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY273778-1|AAP33487.1| 427|Apis mellifera ultraspiracle protein... 133 2e-33
AF263459-1|AAF73057.1| 427|Apis mellifera ultraspiracle protein... 133 2e-33
AB267886-1|BAF46356.1| 567|Apis mellifera ecdysteroid receptor ... 74 2e-15
AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced prot... 73 4e-15
AB264334-1|BAF44089.1| 30|Apis mellifera ecdysone-induced prot... 51 1e-08
AB095514-1|BAC76336.1| 72|Apis mellifera ecdyson receptor prot... 46 4e-07
AB264335-1|BAF44090.1| 87|Apis mellifera ecdysone-induced prot... 33 0.004
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein. 24 1.7
AY921579-1|AAX14899.1| 996|Apis mellifera ephrin receptor protein. 23 2.9
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 22 6.7
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 22 6.7
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 22 6.7
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 22 6.7
AY769960-1|AAV34676.1| 603|Apis mellifera soluble guanylyl cycl... 22 6.7
AB181489-1|BAD22772.1| 603|Apis mellifera soluble guanylyl cycl... 22 6.7
DQ342041-1|ABC69933.1| 828|Apis mellifera STIP protein. 22 8.9
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 22 8.9
>AY273778-1|AAP33487.1| 427|Apis mellifera ultraspiracle protein
protein.
Length = 427
Score = 133 bits (321), Expect = 2e-33
Identities = 78/162 (48%), Positives = 88/162 (54%), Gaps = 3/162 (1%)
Frame = +3
Query: 249 KKDKPTMSVTALINRAWXXXXXXXXXXXXXXXXXHSNFLQPMATPSTTPNVELDIQWLNI 428
KK+KP MSVTA+I +SN P + +++ D L I
Sbjct: 3 KKEKPMMSVTAIIQGT---QAQHWSRGNTWLSLDNSNMSMSSVGPQSPLDMKPDTASL-I 58
Query: 429 ESGFMSPMSPPEMKPDTAMLDG---FRDDSTXXXXXXXXXXXXXLSGSKHLCSICGDRAS 599
G SP P TA S LSGSKHLCSICGDRAS
Sbjct: 59 NPGNFSPSGPNSPGSFTAGCHSNLLSTSPSGQNKAVAPYPPNHPLSGSKHLCSICGDRAS 118
Query: 600 GKHYGVYSCEGCKGFFKRTVRKDLTYACREDKNCIIDKRQRN 725
GKHYGVYSCEGCKGFFKRTVRKDL+YACRE+K+CIIDKRQRN
Sbjct: 119 GKHYGVYSCEGCKGFFKRTVRKDLSYACREEKSCIIDKRQRN 160
Score = 50.8 bits (116), Expect = 2e-08
Identities = 21/26 (80%), Positives = 22/26 (84%)
Frame = +1
Query: 730 CQYCRYQKCLACGMKREAVXXEKXRT 807
CQYCRYQKCLA GMKREAV E+ RT
Sbjct: 162 CQYCRYQKCLAMGMKREAVQEERQRT 187
>AF263459-1|AAF73057.1| 427|Apis mellifera ultraspiracle protein
protein.
Length = 427
Score = 133 bits (321), Expect = 2e-33
Identities = 78/162 (48%), Positives = 88/162 (54%), Gaps = 3/162 (1%)
Frame = +3
Query: 249 KKDKPTMSVTALINRAWXXXXXXXXXXXXXXXXXHSNFLQPMATPSTTPNVELDIQWLNI 428
KK+KP MSVTA+I +SN P + +++ D L I
Sbjct: 3 KKEKPMMSVTAIIQGT---QAQHWSRGNTWLSLDNSNMSMSSVGPQSPLDMKPDTASL-I 58
Query: 429 ESGFMSPMSPPEMKPDTAMLDG---FRDDSTXXXXXXXXXXXXXLSGSKHLCSICGDRAS 599
G SP P TA S LSGSKHLCSICGDRAS
Sbjct: 59 NPGNFSPSGPNSPGSFTAGCHSNLLSTSPSGQNKAVAPYPPNHPLSGSKHLCSICGDRAS 118
Query: 600 GKHYGVYSCEGCKGFFKRTVRKDLTYACREDKNCIIDKRQRN 725
GKHYGVYSCEGCKGFFKRTVRKDL+YACRE+K+CIIDKRQRN
Sbjct: 119 GKHYGVYSCEGCKGFFKRTVRKDLSYACREEKSCIIDKRQRN 160
Score = 50.8 bits (116), Expect = 2e-08
Identities = 21/26 (80%), Positives = 22/26 (84%)
Frame = +1
Query: 730 CQYCRYQKCLACGMKREAVXXEKXRT 807
CQYCRYQKCLA GMKREAV E+ RT
Sbjct: 162 CQYCRYQKCLAMGMKREAVQEERQRT 187
>AB267886-1|BAF46356.1| 567|Apis mellifera ecdysteroid receptor A
isoform protein.
Length = 567
Score = 73.7 bits (173), Expect = 2e-15
Identities = 28/53 (52%), Positives = 36/53 (67%)
Frame = +3
Query: 564 KHLCSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLTYACREDKNCIIDKRQR 722
+ LC +CGDRASG HY +CEGCKGFF+R++ K+ Y C+ NC ID R
Sbjct: 184 EELCLVCGDRASGYHYNALTCEGCKGFFRRSITKNAVYQCKYGNNCEIDMYMR 236
Score = 31.5 bits (68), Expect = 0.011
Identities = 13/37 (35%), Positives = 20/37 (54%)
Frame = +1
Query: 730 CQYCRYQKCLACGMKREAVXXEKXRTAKGXKKRSSXQ 840
CQ CR +KCL GM+ E V E K ++++ +
Sbjct: 239 CQECRLKKCLTVGMRPECVVPEYQCAVKRKEEKAQKE 275
>AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced protein
75 protein.
Length = 900
Score = 72.9 bits (171), Expect = 4e-15
Identities = 29/57 (50%), Positives = 43/57 (75%), Gaps = 1/57 (1%)
Frame = +3
Query: 558 GSKHLCSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLTY-ACREDKNCIIDKRQRN 725
G+ LC +CGD+ASG HYGV+SCEGCKGFF+R++++ + Y C +++ C I + RN
Sbjct: 62 GTTVLCRVCGDKASGFHYGVHSCEGCKGFFRRSIQQKIQYRPCTKNQQCSILRINRN 118
Score = 36.3 bits (80), Expect = 4e-04
Identities = 13/19 (68%), Positives = 16/19 (84%)
Frame = +1
Query: 730 CQYCRYQKCLACGMKREAV 786
CQYCR +KC+A GM R+AV
Sbjct: 120 CQYCRLKKCIAVGMSRDAV 138
>AB264334-1|BAF44089.1| 30|Apis mellifera ecdysone-induced protein
75 protein.
Length = 30
Score = 51.2 bits (117), Expect = 1e-08
Identities = 19/27 (70%), Positives = 23/27 (85%)
Frame = +3
Query: 558 GSKHLCSICGDRASGKHYGVYSCEGCK 638
G+ LC +CGD+ASG HYGV+SCEGCK
Sbjct: 4 GTTVLCRVCGDKASGFHYGVHSCEGCK 30
>AB095514-1|BAC76336.1| 72|Apis mellifera ecdyson receptor
protein.
Length = 72
Score = 46.4 bits (105), Expect = 4e-07
Identities = 17/33 (51%), Positives = 22/33 (66%)
Frame = +3
Query: 624 CEGCKGFFKRTVRKDLTYACREDKNCIIDKRQR 722
CEGCKGFF+R++ K+ Y C+ NC ID R
Sbjct: 1 CEGCKGFFRRSITKNAVYQCKYGNNCEIDMYMR 33
Score = 31.9 bits (69), Expect = 0.008
Identities = 13/37 (35%), Positives = 20/37 (54%)
Frame = +1
Query: 730 CQYCRYQKCLACGMKREAVXXEKXRTAKGXKKRSSXQ 840
CQ CR +KCL GM+ E + E K +K++ +
Sbjct: 36 CQECRLKKCLTVGMRPECMVPEYQCAVKRKEKKAQKE 72
>AB264335-1|BAF44090.1| 87|Apis mellifera ecdysone-induced protein
75 protein.
Length = 87
Score = 33.1 bits (72), Expect = 0.004
Identities = 11/17 (64%), Positives = 14/17 (82%)
Frame = +1
Query: 730 CQYCRYQKCLACGMKRE 780
CQYCR +KC+A GM R+
Sbjct: 71 CQYCRLKKCIAVGMSRD 87
>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
Length = 1598
Score = 24.2 bits (50), Expect = 1.7
Identities = 9/18 (50%), Positives = 11/18 (61%)
Frame = -2
Query: 239 RHGHTQTSSHHYKLTALQ 186
RH H Q HH + TA+Q
Sbjct: 140 RHHHLQNHHHHLQSTAVQ 157
>AY921579-1|AAX14899.1| 996|Apis mellifera ephrin receptor protein.
Length = 996
Score = 23.4 bits (48), Expect = 2.9
Identities = 8/28 (28%), Positives = 11/28 (39%)
Frame = +3
Query: 567 HLCSICGDRASGKHYGVYSCEGCKGFFK 650
H C C + YG C G+F+
Sbjct: 277 HSCEACPAHSKSSDYGFTECRCDPGYFR 304
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 22.2 bits (45), Expect = 6.7
Identities = 8/21 (38%), Positives = 14/21 (66%)
Frame = +3
Query: 639 GFFKRTVRKDLTYACREDKNC 701
G FK T + D+T+ +D++C
Sbjct: 105 GIFKSTCKIDITWFPFDDQHC 125
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 22.2 bits (45), Expect = 6.7
Identities = 8/21 (38%), Positives = 14/21 (66%)
Frame = +3
Query: 639 GFFKRTVRKDLTYACREDKNC 701
G FK T + D+T+ +D++C
Sbjct: 105 GIFKSTCKIDITWFPFDDQHC 125
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 22.2 bits (45), Expect = 6.7
Identities = 8/21 (38%), Positives = 14/21 (66%)
Frame = +3
Query: 639 GFFKRTVRKDLTYACREDKNC 701
G FK T + D+T+ +D++C
Sbjct: 173 GIFKSTCKIDITWFPFDDQHC 193
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 22.2 bits (45), Expect = 6.7
Identities = 8/21 (38%), Positives = 14/21 (66%)
Frame = +3
Query: 639 GFFKRTVRKDLTYACREDKNC 701
G FK T + D+T+ +D++C
Sbjct: 173 GIFKSTCKIDITWFPFDDQHC 193
>AY769960-1|AAV34676.1| 603|Apis mellifera soluble guanylyl cyclase
beta 1 subunit protein.
Length = 603
Score = 22.2 bits (45), Expect = 6.7
Identities = 12/27 (44%), Positives = 14/27 (51%)
Frame = +3
Query: 711 KRQRNXLPVLPISEVSRLRHEKGGCAK 791
K R VLPIS + LRH + AK
Sbjct: 379 KTDRLLYSVLPISVANELRHSRPVPAK 405
>AB181489-1|BAD22772.1| 603|Apis mellifera soluble guanylyl cyclase
beta 1 subunit protein.
Length = 603
Score = 22.2 bits (45), Expect = 6.7
Identities = 12/27 (44%), Positives = 14/27 (51%)
Frame = +3
Query: 711 KRQRNXLPVLPISEVSRLRHEKGGCAK 791
K R VLPIS + LRH + AK
Sbjct: 379 KTDRLLYSVLPISVANELRHSRPVPAK 405
>DQ342041-1|ABC69933.1| 828|Apis mellifera STIP protein.
Length = 828
Score = 21.8 bits (44), Expect = 8.9
Identities = 9/21 (42%), Positives = 12/21 (57%)
Frame = +1
Query: 349 SIRISCSQWLHLQPHPMLNSI 411
SIR + QW QP P++ I
Sbjct: 479 SIRGAIQQWTCRQPEPLIELI 499
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 21.8 bits (44), Expect = 8.9
Identities = 8/21 (38%), Positives = 13/21 (61%)
Frame = +3
Query: 639 GFFKRTVRKDLTYACREDKNC 701
G FK T + D+T+ +D+ C
Sbjct: 142 GIFKSTCKIDITWFPFDDQRC 162
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 208,961
Number of Sequences: 438
Number of extensions: 4026
Number of successful extensions: 39
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 39
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 29509116
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -