Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP03_FL5_N10
(855 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 68 1e-13
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 68 1e-13
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 67 2e-13
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 66 3e-13
DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 66 3e-13
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 66 4e-13
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 65 7e-13
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 65 9e-13
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 65 9e-13
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 62 5e-12
DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 62 6e-12
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 61 1e-11
AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic ac... 60 2e-11
DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholi... 60 3e-11
AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic ac... 60 3e-11
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 59 6e-11
DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholi... 56 4e-10
DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channe... 55 1e-09
AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic ac... 54 1e-09
DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated... 49 6e-08
DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chlor... 43 4e-06
DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chlor... 43 4e-06
DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholi... 43 4e-06
DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channe... 41 1e-05
DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride c... 38 2e-04
DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride c... 38 2e-04
AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl sub... 38 2e-04
DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chlor... 36 5e-04
DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chlor... 33 0.003
DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride... 31 0.010
DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride... 31 0.010
DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride... 31 0.010
DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride... 31 0.010
DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated... 31 0.018
DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated... 30 0.031
AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein. 23 4.7
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 67.7 bits (158), Expect = 1e-13
Identities = 33/121 (27%), Positives = 62/121 (51%), Gaps = 2/121 (1%)
Frame = +1
Query: 226 MLDIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-AT 399
++D+ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 91 IIDVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEG 150
Query: 400 TAGDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEXDFV 579
G Y V++NGS ++ + + + +P D Q C KFGS ++ ++ D V
Sbjct: 151 FDGTYQTNVVVTHNGSCLYVPPGIFKSTCKIDITWFPFDDQHCDMKFGSWTYDGNQVDLV 210
Query: 580 I 582
+
Sbjct: 211 L 211
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 67.7 bits (158), Expect = 1e-13
Identities = 33/121 (27%), Positives = 62/121 (51%), Gaps = 2/121 (1%)
Frame = +1
Query: 226 MLDIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-AT 399
++D+ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 91 IIDVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEG 150
Query: 400 TAGDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEXDFV 579
G Y V++NGS ++ + + + +P D Q C KFGS ++ ++ D V
Sbjct: 151 FDGTYQTNVVVTHNGSCLYVPPGIFKSTCKIDITWFPFDDQHCDMKFGSWTYDGNQVDLV 210
Query: 580 I 582
+
Sbjct: 211 L 211
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 67.3 bits (157), Expect = 2e-13
Identities = 33/121 (27%), Positives = 62/121 (51%), Gaps = 2/121 (1%)
Frame = +1
Query: 226 MLDIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-AT 399
++D+ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 23 IIDVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEG 82
Query: 400 TAGDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEXDFV 579
G Y V++NGS ++ + + + +P D Q C KFGS ++ ++ D V
Sbjct: 83 FDGTYQTSVVVTHNGSCLYVPPGIFKSTCKIDITWFPFDDQHCDMKFGSWTYDGNQVDLV 142
Query: 580 I 582
+
Sbjct: 143 L 143
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 66.5 bits (155), Expect = 3e-13
Identities = 33/121 (27%), Positives = 62/121 (51%), Gaps = 2/121 (1%)
Frame = +1
Query: 226 MLDIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-AT 399
++D+ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 23 IIDVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEG 82
Query: 400 TAGDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEXDFV 579
G Y V+++GS ++ + M + +P D Q C KFGS ++ ++ D V
Sbjct: 83 FDGTYQTSVVVTHDGSCLYVPPGIFKSTCKMDIAWFPFDDQHCDMKFGSWTYDGNQVDLV 142
Query: 580 I 582
+
Sbjct: 143 L 143
>DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine
receptor beta1subunit protein.
Length = 520
Score = 66.5 bits (155), Expect = 3e-13
Identities = 36/144 (25%), Positives = 69/144 (47%), Gaps = 10/144 (6%)
Frame = +1
Query: 226 MLDIRESESTVRIQADLQMNWIDKRLSWNAGEWG-CSTWLVSSERLWRPDVVLLNAAATT 402
++++ E ++ L+ W D +L W+ ++G + +++W+PD+VL N A
Sbjct: 63 LINVNEKNQIMKSNVWLRFIWTDYQLQWDEADYGGIGVLRLPPDKVWKPDIVLFNNAD-- 120
Query: 403 AGDYALRAR----VSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEX 570
G+Y +R + + NG V W+ + ++ + +P D QTC KFGS N D+
Sbjct: 121 -GNYEVRYKSNVLIYPNGDVLWVPPAIYQSSCTIDVTYFPFDQQTCIMKFGSWTFNGDQV 179
Query: 571 DFVIDXR-----IYSMFESGAWDV 627
+ + ++SG WD+
Sbjct: 180 SLALYNNKNFVDLSDYWKSGTWDI 203
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 66.1 bits (154), Expect = 4e-13
Identities = 33/121 (27%), Positives = 62/121 (51%), Gaps = 2/121 (1%)
Frame = +1
Query: 226 MLDIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-AT 399
++D+ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 23 IIDVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEG 82
Query: 400 TAGDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEXDFV 579
G Y V+++GS ++ + M + +P D Q C KFGS ++ ++ D V
Sbjct: 83 FDGTYQTSVVVTHDGSCLYVPPGIFKSTCKMDVAWFPFDDQHCDMKFGSWTYDGNQVDLV 142
Query: 580 I 582
+
Sbjct: 143 L 143
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 65.3 bits (152), Expect = 7e-13
Identities = 32/121 (26%), Positives = 62/121 (51%), Gaps = 2/121 (1%)
Frame = +1
Query: 226 MLDIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-AT 399
++D+ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 23 IIDVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEG 82
Query: 400 TAGDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEXDFV 579
G Y V+++GS ++ + + + +P D Q C KFGS ++ ++ D V
Sbjct: 83 FDGTYQTSVVVTHDGSCLYVPPGIFKSTCKIDITWFPFDDQHCDMKFGSWTYDGNQVDLV 142
Query: 580 I 582
+
Sbjct: 143 L 143
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 64.9 bits (151), Expect = 9e-13
Identities = 32/121 (26%), Positives = 62/121 (51%), Gaps = 2/121 (1%)
Frame = +1
Query: 226 MLDIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-AT 399
++D+ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 23 IIDVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEG 82
Query: 400 TAGDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEXDFV 579
G Y V+++GS ++ + + + +P D Q C KFGS ++ ++ D V
Sbjct: 83 FDGTYQTSVVVTHDGSCLYVPPGIFKSTCKIDIAWFPFDDQHCDMKFGSWTYDGNQVDLV 142
Query: 580 I 582
+
Sbjct: 143 L 143
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 64.9 bits (151), Expect = 9e-13
Identities = 32/121 (26%), Positives = 62/121 (51%), Gaps = 2/121 (1%)
Frame = +1
Query: 226 MLDIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-AT 399
++D+ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 23 IIDVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEG 82
Query: 400 TAGDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEXDFV 579
G Y V+++GS ++ + + + +P D Q C KFGS ++ ++ D V
Sbjct: 83 FDGTYQTSVVVTHDGSCLYVPPGIFGSTCKIDIAWFPFDDQHCDMKFGSWTYDGNQVDLV 142
Query: 580 I 582
+
Sbjct: 143 L 143
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 62.5 bits (145), Expect = 5e-12
Identities = 37/140 (26%), Positives = 64/140 (45%), Gaps = 6/140 (4%)
Frame = +1
Query: 226 MLDIRESESTVRIQADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATT 402
++D+ E + L++ W D + WN ++G L + RLW+PDV++ N+A
Sbjct: 60 IIDVDEKNQLLITNLWLKLEWNDVNMRWNVSDYGGVRDLRIPPHRLWKPDVLMYNSADEG 119
Query: 403 A-GDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEXDFV 579
G Y V NNG+ ++ + + + +P D Q C KFGS ++ + D
Sbjct: 120 FDGTYPTNVVVKNNGTCLYVPPGIFKSTCKIDITWFPFDDQRCEMKFGSWTYDGFQLDLQ 179
Query: 580 IDXR----IYSMFESGAWDV 627
+ I S +G WD+
Sbjct: 180 LQDEAGGDISSFITNGEWDL 199
>DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine
receptor alpha3subunit protein.
Length = 566
Score = 62.1 bits (144), Expect = 6e-12
Identities = 33/118 (27%), Positives = 57/118 (48%), Gaps = 2/118 (1%)
Frame = +1
Query: 226 MLDIRESESTVRIQADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAA-AT 399
++D+ + ++ +W D +L W+ E+G L V S+ +WRPD+VL N A
Sbjct: 61 LIDVNLKNQIMTTNLWVEQSWYDYKLKWDPKEYGGVEMLHVPSDHIWRPDIVLYNNADGN 120
Query: 400 TAGDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEXD 573
A +A ++ G V W + + ++ +P D QTC KFGS ++ + D
Sbjct: 121 FEVTLATKATLNYTGRVEWKPPAIYKSSCEIDVEYFPFDEQTCVMKFGSWTYDGFQVD 178
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 61.3 bits (142), Expect = 1e-11
Identities = 33/118 (27%), Positives = 56/118 (47%), Gaps = 2/118 (1%)
Frame = +1
Query: 226 MLDIRESESTVRIQADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAA-AT 399
++D+ + ++ +W D +L W E+G L V S+ +WRPD+VL N A
Sbjct: 65 LIDVNLKNQIMTTNLWVEQSWYDYKLRWEPKEYGGVKMLHVPSDHIWRPDIVLYNNADGN 124
Query: 400 TAGDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEXD 573
A +A + + G V W + + ++ +P D QTC KFGS ++ + D
Sbjct: 125 FEVTLATKATIYHQGLVEWKPPAIYKSSCEIDVEYFPFDEQTCVLKFGSWTYDGFKVD 182
>AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha-3 protein.
Length = 537
Score = 60.5 bits (140), Expect = 2e-11
Identities = 35/105 (33%), Positives = 53/105 (50%), Gaps = 5/105 (4%)
Frame = +1
Query: 274 LQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTAGDYAL----RARVSN 438
++ W D +L WN E+G L V SE +W PD+VL N A G+Y + +A +
Sbjct: 86 VEQRWNDYKLKWNPEEYGGVEMLYVPSENIWLPDIVLYNNAD---GNYEVTLMTKATLKY 142
Query: 439 NGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEXD 573
G VSW + + ++ +P D Q+C KFGS +N + D
Sbjct: 143 TGDVSWKPPAIYKSSCEINVEYFPFDEQSCIMKFGSWTYNGAQVD 187
>DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholine
receptor alpha9subunit protein.
Length = 431
Score = 60.1 bits (139), Expect = 3e-11
Identities = 33/146 (22%), Positives = 66/146 (45%), Gaps = 7/146 (4%)
Frame = +1
Query: 226 MLDIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAAATT 402
+++ + S + + + + + W D LSW ++ G + V S+ +W PD+ + N+ T
Sbjct: 79 LMEFDDWTSVMELHSWMTLMWTDSHLSWKPSDFDGINYIYVKSDDIWVPDISVYNSGDMT 138
Query: 403 ---AGDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEXD 573
G V ++GSVS + + + +WP D C FGS +H+ +E +
Sbjct: 139 FDQTGIPPTTCLVFSSGSVSCVPSVKHVAKCATDFSSWPYDTHRCRINFGSWVHSGEEVN 198
Query: 574 FVIDXRIYSM---FESGAWDVTALSS 642
+D + + M + WD + +
Sbjct: 199 IFLDKKGFHMDGYTNNSKWDFKVIKA 224
>AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic
acetylcholine receptorApisa2 subunit protein.
Length = 541
Score = 59.7 bits (138), Expect = 3e-11
Identities = 34/118 (28%), Positives = 55/118 (46%), Gaps = 2/118 (1%)
Frame = +1
Query: 226 MLDIRESESTVRIQADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATT 402
++D+ + + L+ W D + W+ E+G T L V SE +W PD+VL N A
Sbjct: 57 LIDLNLKDQILTTNVWLEHEWQDHKFQWDPAEYGGVTELYVPSEHIWLPDIVLYNNADGE 116
Query: 403 AGDYAL-RARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEXD 573
G + +A + G V W + + + +P D QTC KFGS ++ + D
Sbjct: 117 YGVTTMTKAILHYTGKVLWTPPAIFKSSCEIDVRYFPFDQQTCFMKFGSWTYDGIQID 174
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 58.8 bits (136), Expect = 6e-11
Identities = 35/121 (28%), Positives = 60/121 (49%), Gaps = 5/121 (4%)
Frame = +1
Query: 226 MLDIRESESTVRIQADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATT 402
++D+ + ++ +W D +L W E+G L V S+ +WRPD+VL N A
Sbjct: 65 LIDVNLKNQIMTTNLWVEQSWYDYKLRWEPKEYGGVKMLHVPSDHIWRPDIVLYNNAD-- 122
Query: 403 AGDYAL----RARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEX 570
G+Y + +A V +G V W + S+ ++ +P D+QTC K GS ++ +
Sbjct: 123 -GNYEVTLMTKATVYYSGLVVWQPPAVYKSSCSIDVEFFPYDVQTCVLKLGSWTYDGFKV 181
Query: 571 D 573
D
Sbjct: 182 D 182
>DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholine
receptor alpha1subunit protein.
Length = 601
Score = 56.0 bits (129), Expect = 4e-10
Identities = 33/112 (29%), Positives = 54/112 (48%), Gaps = 5/112 (4%)
Frame = +1
Query: 226 MLDIRESESTVRIQADLQMNWIDKRLSWNAGEWG-CSTWLVSSERLWRPDVVLLNAAATT 402
++D+ + ++ W D +L WN ++G T V SE +W PD+VL N A
Sbjct: 57 LIDVNLKNQIMTTNVWVEQEWNDYKLKWNPDDYGGVDTLHVPSEHIWLPDIVLYNNA--- 113
Query: 403 AGDYAL----RARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGS 546
G+Y + +A + + G V W + + ++ +P D QTC KFGS
Sbjct: 114 DGNYEVTIMTKAILHHTGKVVWKPPAIYKSFCEIDVEYFPFDEQTCFMKFGS 165
>DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channel
protein.
Length = 463
Score = 54.8 bits (126), Expect = 1e-09
Identities = 30/107 (28%), Positives = 50/107 (46%), Gaps = 3/107 (2%)
Frame = +1
Query: 235 IRESESTVRIQADLQMNWIDKRLSWNAGEWGCSTWLVSSERLWRPDVVLLNAAAT---TA 405
I E + T + + +W+D+RL++ G+ + + R+W+PD N + T
Sbjct: 44 ISEVDMTYSMDCYFRQSWVDRRLAFQGGKETLALSISMLARIWKPDTYFYNGKHSYLHTI 103
Query: 406 GDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGS 546
R+ +G V + RL I M L+N+P D Q C +FGS
Sbjct: 104 TSPNKFVRLYQDGRVLYSSRLTIKAGCPMNLENFPMDTQRCPLQFGS 150
>AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic
acetylcholine Apisa7-2 subunit protein.
Length = 461
Score = 54.4 bits (125), Expect = 1e-09
Identities = 30/110 (27%), Positives = 47/110 (42%), Gaps = 3/110 (2%)
Frame = +1
Query: 226 MLDIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAAATT 402
++D+ E + + W D L WNA E+ G V R+WRPD +L N A
Sbjct: 42 IIDVDEKNQILTTNCWVTQIWTDHHLKWNASEFAGIRVIRVPYNRVWRPDTILYNNADPQ 101
Query: 403 AGDYALRARV--SNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGS 546
+ V S+ G V W+ + + ++ +P D Q C K+ S
Sbjct: 102 YSSAVINTNVIVSHTGEVVWLSHGIFRSSCDIDVEFFPFDEQRCVLKWAS 151
>DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 510
Score = 48.8 bits (111), Expect = 6e-08
Identities = 29/107 (27%), Positives = 46/107 (42%), Gaps = 3/107 (2%)
Frame = +1
Query: 235 IRESESTVRIQADLQMNWIDKRLSWNAGEWGCSTWLVSSERLWRPDVVLLNAAATTAGDY 414
+ E + + + +W D RLS+ S + ER+WRPD N +
Sbjct: 76 VSELDMDYSMDCYFRQSWRDSRLSFLGPIKSLSLSIKMLERIWRPDTYFYNGKHSYVHTI 135
Query: 415 ALR---ARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGS 546
+ R+S +G + + RL I M+L N+P D Q+C GS
Sbjct: 136 TVPNKLLRISQDGDILYSMRLTIKAKCPMELRNFPMDRQSCPLILGS 182
>DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 42.7 bits (96), Expect = 4e-06
Identities = 29/111 (26%), Positives = 50/111 (45%), Gaps = 5/111 (4%)
Frame = +1
Query: 262 IQADLQMNWIDKRLSWN--AGEWGCSTWLVSSERLWRPDVVLLNAAATTAGDYALR---A 426
+Q + W+D+RL +N G T L + R+W PD+ N + +
Sbjct: 82 VQLTFREQWLDERLRFNDFGGRLKYLT-LTDASRVWMPDLFFSNEKEGHFHNIIMPNVYI 140
Query: 427 RVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEXDFV 579
R+ NGSV + R+ ++ M L +P D Q C+ + S +D+ F+
Sbjct: 141 RIFPNGSVLYSIRISLTLSCPMNLKLYPLDRQVCSLRMASYGWTTDDLVFL 191
>DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 42.7 bits (96), Expect = 4e-06
Identities = 29/111 (26%), Positives = 50/111 (45%), Gaps = 5/111 (4%)
Frame = +1
Query: 262 IQADLQMNWIDKRLSWN--AGEWGCSTWLVSSERLWRPDVVLLNAAATTAGDYALR---A 426
+Q + W+D+RL +N G T L + R+W PD+ N + +
Sbjct: 82 VQLTFREQWLDERLRFNDFGGRLKYLT-LTDASRVWMPDLFFSNEKEGHFHNIIMPNVYI 140
Query: 427 RVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEXDFV 579
R+ NGSV + R+ ++ M L +P D Q C+ + S +D+ F+
Sbjct: 141 RIFPNGSVLYSIRISLTLSCPMNLKLYPLDRQVCSLRMASYGWTTDDLVFL 191
>DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholine
receptor beta2subunit protein.
Length = 427
Score = 42.7 bits (96), Expect = 4e-06
Identities = 30/118 (25%), Positives = 56/118 (47%), Gaps = 6/118 (5%)
Frame = +1
Query: 232 DIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAAATTAG 408
++ E TV L++ W L+W + E+ ++ V S +W PD+V+ ++ +
Sbjct: 72 NVDEYSHTVDFHVMLKLMWEQSHLTWKSSEFDSINSIRVKSYEIWVPDIVM-HSVTSVGI 130
Query: 409 DY---ALRARVSNNGSVSWIKRLDISTPISMQLDN--WPNDMQTCTFKFGSRMHNSDE 567
D ++ V N+G++ + TP+ + D+ WP D+ CT S H S+E
Sbjct: 131 DLEMPSVECIVFNSGTILCVP-FTTYTPVC-EYDHTWWPYDILNCTIHIASWSHGSNE 186
>DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channel
protein.
Length = 489
Score = 41.1 bits (92), Expect = 1e-05
Identities = 30/107 (28%), Positives = 46/107 (42%), Gaps = 3/107 (2%)
Frame = +1
Query: 235 IRESESTVRIQADLQMNWIDKRLSWNAGEWGCSTWLVSSERLWRPDVVLLNAAATTAGDY 414
I E I L W D+RL+++ E + +E++W PD N + D
Sbjct: 75 ISEVNMDYTITMYLNQYWKDERLAFSQEEEVLTLSGDFAEKIWVPDTFFANDKNSFLHDV 134
Query: 415 ALR---ARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGS 546
R R+S +GSV++ R + M L +P D Q CT + S
Sbjct: 135 TERNKLVRLSGDGSVTYGMRFTTTLACMMDLHYYPLDSQNCTVEIES 181
>DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 37.5 bits (83), Expect = 2e-04
Identities = 29/96 (30%), Positives = 44/96 (45%), Gaps = 9/96 (9%)
Frame = +1
Query: 286 WIDKRLSWNAGEWGCSTWLVSSE---RLWRPDVVLLNAA------ATTAGDYALRARVSN 438
W D RL++ G T V SE +W PD +N ATT+ ++ R+ +
Sbjct: 67 WTDPRLAFKK-RTGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFI---RIHH 122
Query: 439 NGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGS 546
+GS++ RL I+ M L +P D Q C + S
Sbjct: 123 SGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIES 158
>DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 37.5 bits (83), Expect = 2e-04
Identities = 29/96 (30%), Positives = 44/96 (45%), Gaps = 9/96 (9%)
Frame = +1
Query: 286 WIDKRLSWNAGEWGCSTWLVSSE---RLWRPDVVLLNAA------ATTAGDYALRARVSN 438
W D RL++ G T V SE +W PD +N ATT+ ++ R+ +
Sbjct: 67 WTDPRLAFKK-RTGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFI---RIHH 122
Query: 439 NGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGS 546
+GS++ RL I+ M L +P D Q C + S
Sbjct: 123 SGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIES 158
>AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl
subunit protein.
Length = 365
Score = 37.5 bits (83), Expect = 2e-04
Identities = 29/96 (30%), Positives = 44/96 (45%), Gaps = 9/96 (9%)
Frame = +1
Query: 286 WIDKRLSWNAGEWGCSTWLVSSE---RLWRPDVVLLNAA------ATTAGDYALRARVSN 438
W D RL++ G T V SE +W PD +N ATT+ ++ R+ +
Sbjct: 6 WTDPRLAFKK-RTGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFI---RIHH 61
Query: 439 NGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGS 546
+GS++ RL I+ M L +P D Q C + S
Sbjct: 62 SGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIES 97
>DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chloride
channel protein.
Length = 383
Score = 35.9 bits (79), Expect = 5e-04
Identities = 26/120 (21%), Positives = 51/120 (42%), Gaps = 5/120 (4%)
Frame = +1
Query: 235 IRESESTVRIQADLQMNWIDKRLSW--NAGEWGCSTWLVSSERLWRPDVVLLNAAATTAG 408
I E T L +W D RL N E + +WRPD NA T
Sbjct: 44 INEESMTYVADIFLAQSWRDSRLRLPENMSEDYRILDVDWLHNIWRPDCFFKNAKKVTFH 103
Query: 409 DYALRAR---VSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEXDFV 579
+ ++ + ++ ++ ++ +L + +M+ +++P+D Q C+ S H + + F+
Sbjct: 104 EMSIPNHYLWLYHDKTLLYMSKLTLVLSCAMKFESYPHDTQICSMMIESLSHTTQDLVFI 163
>DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chloride
channel protein.
Length = 428
Score = 33.5 bits (73), Expect = 0.003
Identities = 19/81 (23%), Positives = 36/81 (44%), Gaps = 3/81 (3%)
Frame = +1
Query: 352 ERLWRPDVVLLNAAATTAGDYALRAR---VSNNGSVSWIKRLDISTPISMQLDNWPNDMQ 522
+ +WRPD NA + T + + + ++ ++ +L + +M +P+D Q
Sbjct: 116 KNMWRPDSFFKNAKSVTFQTMTIPNHYLWLYKDKTILYMVKLTLKLSCAMNFLIYPHDTQ 175
Query: 523 TCTFKFGSRMHNSDEXDFVID 585
C + S H +DE F D
Sbjct: 176 ECKLQMESLSHTTDEMIFQWD 196
>DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride
channel variant 4 protein.
Length = 489
Score = 31.5 bits (68), Expect = 0.010
Identities = 24/116 (20%), Positives = 46/116 (39%), Gaps = 3/116 (2%)
Frame = +1
Query: 241 ESESTVRIQADLQMNWIDKRLSW-NAGEWGCSTWLVSSERLWRPDV--VLLNAAATTAGD 411
ES ++ LQ W D RL + N ++ + + +W PD ++
Sbjct: 102 ESSLKYEVEFLLQQQWYDPRLRYSNRSQYEFLNAIHHYDDIWLPDTYFIMHGDFKDPLIP 161
Query: 412 YALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEXDFV 579
R+ NG+V+++ R + +L+ +P D C+F S + +V
Sbjct: 162 VHFALRIYRNGTVNYLMRRHLILSCQGRLNIFPFDDPLCSFAIESISYEQTAITYV 217
>DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride
channel variant 3 protein.
Length = 475
Score = 31.5 bits (68), Expect = 0.010
Identities = 24/116 (20%), Positives = 46/116 (39%), Gaps = 3/116 (2%)
Frame = +1
Query: 241 ESESTVRIQADLQMNWIDKRLSW-NAGEWGCSTWLVSSERLWRPDV--VLLNAAATTAGD 411
ES ++ LQ W D RL + N ++ + + +W PD ++
Sbjct: 102 ESSLKYEVEFLLQQQWYDPRLRYSNRSQYEFLNAIHHYDDIWLPDTYFIMHGDFKDPLIP 161
Query: 412 YALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEXDFV 579
R+ NG+V+++ R + +L+ +P D C+F S + +V
Sbjct: 162 VHFALRIYRNGTVNYLMRRHLILSCQGRLNIFPFDDPLCSFAIESISYEQTAITYV 217
>DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride
channel variant 1 protein.
Length = 509
Score = 31.5 bits (68), Expect = 0.010
Identities = 24/116 (20%), Positives = 46/116 (39%), Gaps = 3/116 (2%)
Frame = +1
Query: 241 ESESTVRIQADLQMNWIDKRLSW-NAGEWGCSTWLVSSERLWRPDV--VLLNAAATTAGD 411
ES ++ LQ W D RL + N ++ + + +W PD ++
Sbjct: 153 ESSLKYEVEFLLQQQWYDPRLRYSNRSQYEFLNAIHHYDDIWLPDTYFIMHGDFKDPLIP 212
Query: 412 YALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEXDFV 579
R+ NG+V+++ R + +L+ +P D C+F S + +V
Sbjct: 213 VHFALRIYRNGTVNYLMRRHLILSCQGRLNIFPFDDPLCSFAIESISYEQTAITYV 268
>DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride
channel protein.
Length = 458
Score = 31.5 bits (68), Expect = 0.010
Identities = 24/116 (20%), Positives = 46/116 (39%), Gaps = 3/116 (2%)
Frame = +1
Query: 241 ESESTVRIQADLQMNWIDKRLSW-NAGEWGCSTWLVSSERLWRPDV--VLLNAAATTAGD 411
ES ++ LQ W D RL + N ++ + + +W PD ++
Sbjct: 102 ESSLKYEVEFLLQQQWYDPRLRYSNRSQYEFLNAIHHYDDIWLPDTYFIMHGDFKDPLIP 161
Query: 412 YALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEXDFV 579
R+ NG+V+++ R + +L+ +P D C+F S + +V
Sbjct: 162 VHFALRIYRNGTVNYLMRRHLILSCQGRLNIFPFDDPLCSFAIESISYEQTAITYV 217
>DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 469
Score = 30.7 bits (66), Expect = 0.018
Identities = 19/70 (27%), Positives = 33/70 (47%), Gaps = 3/70 (4%)
Frame = +1
Query: 358 LWRPDVVLLN--AAATTAGDYA-LRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTC 528
+W P V + N ++A T + + + +G V RL + ++L+ +P D+Q C
Sbjct: 97 IWTPTVYVSNEPSSAITGNNVKDVLVSIDPSGMVRLNTRLQATLNCGLRLEKFPFDVQEC 156
Query: 529 TFKFGSRMHN 558
F S HN
Sbjct: 157 PLIFESWTHN 166
>DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 391
Score = 29.9 bits (64), Expect = 0.031
Identities = 26/112 (23%), Positives = 47/112 (41%), Gaps = 10/112 (8%)
Frame = +1
Query: 223 DMLDIRESESTVRIQADLQMNWIDKRLS-----WNAGEWGCSTWLVSSERLWRPDVVLLN 387
D+ I + R+ ++ +WI+ RL + G+ + + LW+PD LN
Sbjct: 21 DINSINVEDMDFRVDMFVRQSWIESRLDMPDYIFEEGDDYVTLPPEFFDSLWQPDPYFLN 80
Query: 388 AAATTAGDYALRARVSN-----NGSVSWIKRLDISTPISMQLDNWPNDMQTC 528
A + AL + S+ N +V + R+ M+ +P D+Q C
Sbjct: 81 AKVSEIA--ALNHKFSSVTLYRNKTVKYSARMHAIIACQMEFQLYPMDIQIC 130
>AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein.
Length = 735
Score = 22.6 bits (46), Expect = 4.7
Identities = 8/14 (57%), Positives = 10/14 (71%)
Frame = -1
Query: 339 PSAAAPLPCVPTQS 298
PSA AP+P +P S
Sbjct: 411 PSAGAPMPPIPNMS 424
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 222,882
Number of Sequences: 438
Number of extensions: 4604
Number of successful extensions: 91
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 48
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 53
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 27552579
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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