Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP03_FL5_M24
(917 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 62 9e-12
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 62 9e-12
DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 61 1e-11
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 60 3e-11
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 60 3e-11
DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 60 3e-11
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 59 5e-11
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 59 6e-11
AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic ac... 58 8e-11
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 58 1e-10
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 58 1e-10
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 58 1e-10
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 58 1e-10
AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic ac... 57 2e-10
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 56 6e-10
AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic ac... 55 8e-10
DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholi... 55 1e-09
DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channe... 53 4e-09
DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholi... 51 1e-08
DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated... 49 5e-08
DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholi... 49 7e-08
DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chlor... 45 8e-07
DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chlor... 42 6e-06
DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channe... 42 1e-05
DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride... 40 4e-05
DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride... 40 4e-05
DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride... 40 4e-05
DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride c... 39 7e-05
DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride c... 38 1e-04
AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl sub... 38 1e-04
DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride... 33 0.003
DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chlor... 32 0.006
DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated... 30 0.026
DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chlor... 28 0.10
AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein. 23 5.1
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 61.7 bits (143), Expect = 9e-12
Identities = 41/152 (26%), Positives = 68/152 (44%), Gaps = 4/152 (2%)
Frame = +3
Query: 69 CGRMRKR--NITVPHDRLAPRNVRSGLPPPXSKIVVNLTLHLRHANIRESESTVRIQADL 242
CGR KR N + R V + P K + L + ++ E + A L
Sbjct: 51 CGRHEKRLLNELLSSYNTLERPVANESEPLEVKFGITLQQII---DVDEKNQILTTNAWL 107
Query: 243 QMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSV 416
++ W+D L WN E+ G ++ +LW+PD+++ N+A G Y V++NGS
Sbjct: 108 KLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFDGTYQTNVVVTHNGSC 167
Query: 417 SWIKRLDISTPISMQLDXWPNDMQTCTFKFGS 512
++ + + + +P D Q C KFGS
Sbjct: 168 LYVPPGIFKSTCKIDITWFPFDDQHCDMKFGS 199
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 61.7 bits (143), Expect = 9e-12
Identities = 41/152 (26%), Positives = 68/152 (44%), Gaps = 4/152 (2%)
Frame = +3
Query: 69 CGRMRKR--NITVPHDRLAPRNVRSGLPPPXSKIVVNLTLHLRHANIRESESTVRIQADL 242
CGR KR N + R V + P K + L + ++ E + A L
Sbjct: 51 CGRHEKRLLNELLSSYNTLERPVANESEPLEVKFGITLQQII---DVDEKNQILTTNAWL 107
Query: 243 QMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSV 416
++ W+D L WN E+ G ++ +LW+PD+++ N+A G Y V++NGS
Sbjct: 108 KLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFDGTYQTNVVVTHNGSC 167
Query: 417 SWIKRLDISTPISMQLDXWPNDMQTCTFKFGS 512
++ + + + +P D Q C KFGS
Sbjct: 168 LYVPPGIFKSTCKIDITWFPFDDQHCDMKFGS 199
>DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine
receptor beta1subunit protein.
Length = 520
Score = 61.3 bits (142), Expect = 1e-11
Identities = 35/124 (28%), Positives = 62/124 (50%), Gaps = 6/124 (4%)
Frame = +3
Query: 159 KIVVNLTL-HLRHANIRESESTVRIQADLQMNWIDKRLSWNAGEWG-CSTWLVSSERLWR 332
K+ VN L ++ N+ E ++ L+ W D +L W+ ++G + +++W+
Sbjct: 51 KVHVNFGLAFVQLINVNEKNQIMKSNVWLRFIWTDYQLQWDEADYGGIGVLRLPPDKVWK 110
Query: 333 PDVVLLNAAATTAGDYALRAR----VSNNGSVSWIKRLDISTPISMQLDXWPNDMQTCTF 500
PD+VL N A G+Y +R + + NG V W+ + ++ + +P D QTC
Sbjct: 111 PDIVLFNNAD---GNYEVRYKSNVLIYPNGDVLWVPPAIYQSSCTIDVTYFPFDQQTCIM 167
Query: 501 KFGS 512
KFGS
Sbjct: 168 KFGS 171
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 60.1 bits (139), Expect = 3e-11
Identities = 30/107 (28%), Positives = 53/107 (49%), Gaps = 2/107 (1%)
Frame = +3
Query: 198 NIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 371
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 372 GDYALRARVSNNGSVSWIKRLDISTPISMQLDXWPNDMQTCTFKFGS 512
G Y V++NGS ++ + + + +P D Q C KFGS
Sbjct: 85 GTYQTSVVVTHNGSCLYVPPGIFKSTCKIDITWFPFDDQHCDMKFGS 131
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 60.1 bits (139), Expect = 3e-11
Identities = 36/121 (29%), Positives = 58/121 (47%), Gaps = 3/121 (2%)
Frame = +3
Query: 159 KIVVNLTL-HLRHANIRESESTVRIQADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWR 332
++ + L L L N++ T + ++ +W D +L W E+G L V S+ +WR
Sbjct: 55 RVCIKLKLSQLIDVNLKNQIMTTNLW--VEQSWYDYKLRWEPKEYGGVKMLHVPSDHIWR 112
Query: 333 PDVVLLNAA-ATTAGDYALRARVSNNGSVSWIKRLDISTPISMQLDXWPNDMQTCTFKFG 509
PD+VL N A A +A + + G V W + + ++ +P D QTC KFG
Sbjct: 113 PDIVLYNNADGNFEVTLATKATIYHQGLVEWKPPAIYKSSCEIDVEYFPFDEQTCVLKFG 172
Query: 510 S 512
S
Sbjct: 173 S 173
>DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine
receptor alpha3subunit protein.
Length = 566
Score = 60.1 bits (139), Expect = 3e-11
Identities = 31/93 (33%), Positives = 48/93 (51%), Gaps = 2/93 (2%)
Frame = +3
Query: 240 LQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGS 413
++ +W D +L W+ E+G L V S+ +WRPD+VL N A A +A ++ G
Sbjct: 77 VEQSWYDYKLKWDPKEYGGVEMLHVPSDHIWRPDIVLYNNADGNFEVTLATKATLNYTGR 136
Query: 414 VSWIKRLDISTPISMQLDXWPNDMQTCTFKFGS 512
V W + + ++ +P D QTC KFGS
Sbjct: 137 VEWKPPAIYKSSCEIDVEYFPFDEQTCVMKFGS 169
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 59.3 bits (137), Expect = 5e-11
Identities = 30/107 (28%), Positives = 53/107 (49%), Gaps = 2/107 (1%)
Frame = +3
Query: 198 NIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 371
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 372 GDYALRARVSNNGSVSWIKRLDISTPISMQLDXWPNDMQTCTFKFGS 512
G Y V+++GS ++ + M + +P D Q C KFGS
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKMDIAWFPFDDQHCDMKFGS 131
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 58.8 bits (136), Expect = 6e-11
Identities = 30/107 (28%), Positives = 53/107 (49%), Gaps = 2/107 (1%)
Frame = +3
Query: 198 NIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 371
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 372 GDYALRARVSNNGSVSWIKRLDISTPISMQLDXWPNDMQTCTFKFGS 512
G Y V+++GS ++ + M + +P D Q C KFGS
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKMDVAWFPFDDQHCDMKFGS 131
>AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic
acetylcholine receptorApisa2 subunit protein.
Length = 541
Score = 58.4 bits (135), Expect = 8e-11
Identities = 39/122 (31%), Positives = 57/122 (46%), Gaps = 5/122 (4%)
Frame = +3
Query: 162 IVVNLTLHLRHA---NIRESESTVRIQADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLW 329
+VV L L L N+++ T + L+ W D + W+ E+G T L V SE +W
Sbjct: 46 VVVKLGLRLSQLIDLNLKDQILTTNVW--LEHEWQDHKFQWDPAEYGGVTELYVPSEHIW 103
Query: 330 RPDVVLLNAAATTAGDYAL-RARVSNNGSVSWIKRLDISTPISMQLDXWPNDMQTCTFKF 506
PD+VL N A G + +A + G V W + + + +P D QTC KF
Sbjct: 104 LPDIVLYNNADGEYGVTTMTKAILHYTGKVLWTPPAIFKSSCEIDVRYFPFDQQTCFMKF 163
Query: 507 GS 512
GS
Sbjct: 164 GS 165
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 58.0 bits (134), Expect = 1e-10
Identities = 29/107 (27%), Positives = 53/107 (49%), Gaps = 2/107 (1%)
Frame = +3
Query: 198 NIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 371
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 372 GDYALRARVSNNGSVSWIKRLDISTPISMQLDXWPNDMQTCTFKFGS 512
G Y V+++GS ++ + + + +P D Q C KFGS
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKIDITWFPFDDQHCDMKFGS 131
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 58.0 bits (134), Expect = 1e-10
Identities = 38/124 (30%), Positives = 62/124 (50%), Gaps = 6/124 (4%)
Frame = +3
Query: 159 KIVVNLTL-HLRHANIRESESTVRIQADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWR 332
++ + L L L N++ T + ++ +W D +L W E+G L V S+ +WR
Sbjct: 55 RVCIKLKLSQLIDVNLKNQIMTTNLW--VEQSWYDYKLRWEPKEYGGVKMLHVPSDHIWR 112
Query: 333 PDVVLLNAAATTAGDYAL----RARVSNNGSVSWIKRLDISTPISMQLDXWPNDMQTCTF 500
PD+VL N A G+Y + +A V +G V W + S+ ++ +P D+QTC
Sbjct: 113 PDIVLYNNAD---GNYEVTLMTKATVYYSGLVVWQPPAVYKSSCSIDVEFFPYDVQTCVL 169
Query: 501 KFGS 512
K GS
Sbjct: 170 KLGS 173
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 57.6 bits (133), Expect = 1e-10
Identities = 29/107 (27%), Positives = 53/107 (49%), Gaps = 2/107 (1%)
Frame = +3
Query: 198 NIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 371
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 372 GDYALRARVSNNGSVSWIKRLDISTPISMQLDXWPNDMQTCTFKFGS 512
G Y V+++GS ++ + + + +P D Q C KFGS
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKIDIAWFPFDDQHCDMKFGS 131
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 57.6 bits (133), Expect = 1e-10
Identities = 29/107 (27%), Positives = 53/107 (49%), Gaps = 2/107 (1%)
Frame = +3
Query: 198 NIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 371
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 372 GDYALRARVSNNGSVSWIKRLDISTPISMQLDXWPNDMQTCTFKFGS 512
G Y V+++GS ++ + + + +P D Q C KFGS
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFGSTCKIDIAWFPFDDQHCDMKFGS 131
>AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha-3 protein.
Length = 537
Score = 57.2 bits (132), Expect = 2e-10
Identities = 33/96 (34%), Positives = 49/96 (51%), Gaps = 5/96 (5%)
Frame = +3
Query: 240 LQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTAGDYAL----RARVSN 404
++ W D +L WN E+G L V SE +W PD+VL N A G+Y + +A +
Sbjct: 86 VEQRWNDYKLKWNPEEYGGVEMLYVPSENIWLPDIVLYNNAD---GNYEVTLMTKATLKY 142
Query: 405 NGSVSWIKRLDISTPISMQLDXWPNDMQTCTFKFGS 512
G VSW + + ++ +P D Q+C KFGS
Sbjct: 143 TGDVSWKPPAIYKSSCEINVEYFPFDEQSCIMKFGS 178
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 55.6 bits (128), Expect = 6e-10
Identities = 29/93 (31%), Positives = 46/93 (49%), Gaps = 2/93 (2%)
Frame = +3
Query: 240 LQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTA-GDYALRARVSNNGS 413
L++ W D + WN ++G L + RLW+PDV++ N+A G Y V NNG+
Sbjct: 76 LKLEWNDVNMRWNVSDYGGVRDLRIPPHRLWKPDVLMYNSADEGFDGTYPTNVVVKNNGT 135
Query: 414 VSWIKRLDISTPISMQLDXWPNDMQTCTFKFGS 512
++ + + + +P D Q C KFGS
Sbjct: 136 CLYVPPGIFKSTCKIDITWFPFDDQRCEMKFGS 168
>AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic
acetylcholine Apisa7-2 subunit protein.
Length = 461
Score = 55.2 bits (127), Expect = 8e-10
Identities = 33/120 (27%), Positives = 51/120 (42%), Gaps = 3/120 (2%)
Frame = +3
Query: 162 IVVNLTLHLRHANIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPD 338
+V L+LH ++ E + + W D L WNA E+ G V R+WRPD
Sbjct: 33 VVFGLSLH-HIIDVDEKNQILTTNCWVTQIWTDHHLKWNASEFAGIRVIRVPYNRVWRPD 91
Query: 339 VVLLNAAATTAGDYALRARV--SNNGSVSWIKRLDISTPISMQLDXWPNDMQTCTFKFGS 512
+L N A + V S+ G V W+ + + ++ +P D Q C K+ S
Sbjct: 92 TILYNNADPQYSSAVINTNVIVSHTGEVVWLSHGIFRSSCDIDVEFFPFDEQRCVLKWAS 151
>DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholine
receptor alpha1subunit protein.
Length = 601
Score = 54.8 bits (126), Expect = 1e-09
Identities = 32/96 (33%), Positives = 49/96 (51%), Gaps = 5/96 (5%)
Frame = +3
Query: 240 LQMNWIDKRLSWNAGEWG-CSTWLVSSERLWRPDVVLLNAAATTAGDYAL----RARVSN 404
++ W D +L WN ++G T V SE +W PD+VL N A G+Y + +A + +
Sbjct: 73 VEQEWNDYKLKWNPDDYGGVDTLHVPSEHIWLPDIVLYNNA---DGNYEVTIMTKAILHH 129
Query: 405 NGSVSWIKRLDISTPISMQLDXWPNDMQTCTFKFGS 512
G V W + + ++ +P D QTC KFGS
Sbjct: 130 TGKVVWKPPAIYKSFCEIDVEYFPFDEQTCFMKFGS 165
>DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channel
protein.
Length = 463
Score = 52.8 bits (121), Expect = 4e-09
Identities = 33/132 (25%), Positives = 59/132 (44%), Gaps = 3/132 (2%)
Frame = +3
Query: 126 NVRSGLPPPXSKIVVNLTLHLRHANIRESESTVRIQADLQMNWIDKRLSWNAGEWGCSTW 305
+VR P + + V++ + I E + T + + +W+D+RL++ G+ +
Sbjct: 20 SVRPDFGGPPATVEVDIMVRSM-GPISEVDMTYSMDCYFRQSWVDRRLAFQGGKETLALS 78
Query: 306 LVSSERLWRPDVVLLNAAAT---TAGDYALRARVSNNGSVSWIKRLDISTPISMQLDXWP 476
+ R+W+PD N + T R+ +G V + RL I M L+ +P
Sbjct: 79 ISMLARIWKPDTYFYNGKHSYLHTITSPNKFVRLYQDGRVLYSSRLTIKAGCPMNLENFP 138
Query: 477 NDMQTCTFKFGS 512
D Q C +FGS
Sbjct: 139 MDTQRCPLQFGS 150
>DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholine
receptor alpha9subunit protein.
Length = 431
Score = 51.2 bits (117), Expect = 1e-08
Identities = 33/132 (25%), Positives = 57/132 (43%), Gaps = 6/132 (4%)
Frame = +3
Query: 144 PPPXSKIVVNLTLHL--RHANIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVS 314
P +I N+T+ L + + S + + + + + W D LSW ++ G + V
Sbjct: 61 PISSHQIANNVTMQLLPKLMEFDDWTSVMELHSWMTLMWTDSHLSWKPSDFDGINYIYVK 120
Query: 315 SERLWRPDVVLLNAAATT---AGDYALRARVSNNGSVSWIKRLDISTPISMQLDXWPNDM 485
S+ +W PD+ + N+ T G V ++GSVS + + + WP D
Sbjct: 121 SDDIWVPDISVYNSGDMTFDQTGIPPTTCLVFSSGSVSCVPSVKHVAKCATDFSSWPYDT 180
Query: 486 QTCTFKFGSRMH 521
C FGS +H
Sbjct: 181 HRCRINFGSWVH 192
>DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 510
Score = 49.2 bits (112), Expect = 5e-08
Identities = 38/148 (25%), Positives = 61/148 (41%), Gaps = 6/148 (4%)
Frame = +3
Query: 87 RNITVPHDRLAPRNVRSGLPP--PXSKIVVNLTLHLRHAN-IRESESTVRIQADLQMNWI 257
RNIT+ + L + LP + VV + +R + E + + + +W
Sbjct: 35 RNITMVLENLLMNYENNQLPTHGKGTPTVVKTNILIRSMGPVSELDMDYSMDCYFRQSWR 94
Query: 258 DKRLSWNAGEWGCSTWLVSSERLWRPDVVLLNAAATTAGDYALR---ARVSNNGSVSWIK 428
D RLS+ S + ER+WRPD N + + R+S +G + +
Sbjct: 95 DSRLSFLGPIKSLSLSIKMLERIWRPDTYFYNGKHSYVHTITVPNKLLRISQDGDILYSM 154
Query: 429 RLDISTPISMQLDXWPNDMQTCTFKFGS 512
RL I M+L +P D Q+C GS
Sbjct: 155 RLTIKAKCPMELRNFPMDRQSCPLILGS 182
>DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholine
receptor beta2subunit protein.
Length = 427
Score = 48.8 bits (111), Expect = 7e-08
Identities = 29/133 (21%), Positives = 56/133 (42%), Gaps = 3/133 (2%)
Frame = +3
Query: 132 RSGLPPPXSKIVVNLTLHLRHANIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWL 308
R +P + ++ L ++H N+ E TV L++ W L+W + E+ ++
Sbjct: 50 RDIIPEQKNATKIDFGLSIQHYNVDEYSHTVDFHVMLKLMWEQSHLTWKSSEFDSINSIR 109
Query: 309 VSSERLWRPDVVL--LNAAATTAGDYALRARVSNNGSVSWIKRLDISTPISMQLDXWPND 482
V S +W PD+V+ + + ++ V N+G++ + + WP D
Sbjct: 110 VKSYEIWVPDIVMHSVTSVGIDLEMPSVECIVFNSGTILCVPFTTYTPVCEYDHTWWPYD 169
Query: 483 MQTCTFKFGSRMH 521
+ CT S H
Sbjct: 170 ILNCTIHIASWSH 182
>DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 45.2 bits (102), Expect = 8e-07
Identities = 32/122 (26%), Positives = 55/122 (45%), Gaps = 6/122 (4%)
Frame = +3
Query: 165 VVNLTLHLRH-ANIRESESTVRIQADLQMNWIDKRLSWN--AGEWGCSTWLVSSERLWRP 335
+V + L +R A I + + +Q + W+D+RL +N G T L + R+W P
Sbjct: 60 IVRVNLFVRSIATISDIKMEYSVQLTFREQWLDERLRFNDFGGRLKYLT-LTDASRVWMP 118
Query: 336 DVVLLNAAATTAGDYALR---ARVSNNGSVSWIKRLDISTPISMQLDXWPNDMQTCTFKF 506
D+ N + + R+ NGSV + R+ ++ M L +P D Q C+ +
Sbjct: 119 DLFFSNEKEGHFHNIIMPNVYIRIFPNGSVLYSIRISLTLSCPMNLKLYPLDRQVCSLRM 178
Query: 507 GS 512
S
Sbjct: 179 AS 180
>DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 42.3 bits (95), Expect = 6e-06
Identities = 31/122 (25%), Positives = 54/122 (44%), Gaps = 6/122 (4%)
Frame = +3
Query: 165 VVNLTLHLRH-ANIRESESTVRIQADLQMNWIDKRLSWN--AGEWGCSTWLVSSERLWRP 335
VV + + +R + I + +Q + W+D+RL +N G T L + R+W P
Sbjct: 60 VVRVNIFVRSISKIDDVTMEYSVQLTFREQWLDERLRFNDFGGRLKYLT-LTDASRVWMP 118
Query: 336 DVVLLNAAATTAGDYALR---ARVSNNGSVSWIKRLDISTPISMQLDXWPNDMQTCTFKF 506
D+ N + + R+ NGSV + R+ ++ M L +P D Q C+ +
Sbjct: 119 DLFFSNEKEGHFHNIIMPNVYIRIFPNGSVLYSIRISLTLSCPMNLKLYPLDRQVCSLRM 178
Query: 507 GS 512
S
Sbjct: 179 AS 180
>DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channel
protein.
Length = 489
Score = 41.5 bits (93), Expect = 1e-05
Identities = 30/107 (28%), Positives = 46/107 (42%), Gaps = 3/107 (2%)
Frame = +3
Query: 201 IRESESTVRIQADLQMNWIDKRLSWNAGEWGCSTWLVSSERLWRPDVVLLNAAATTAGDY 380
I E I L W D+RL+++ E + +E++W PD N + D
Sbjct: 75 ISEVNMDYTITMYLNQYWKDERLAFSQEEEVLTLSGDFAEKIWVPDTFFANDKNSFLHDV 134
Query: 381 ALR---ARVSNNGSVSWIKRLDISTPISMQLDXWPNDMQTCTFKFGS 512
R R+S +GSV++ R + M L +P D Q CT + S
Sbjct: 135 TERNKLVRLSGDGSVTYGMRFTTTLACMMDLHYYPLDSQNCTVEIES 181
>DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride
channel variant 4 protein.
Length = 489
Score = 39.5 bits (88), Expect = 4e-05
Identities = 33/137 (24%), Positives = 59/137 (43%), Gaps = 4/137 (2%)
Frame = +3
Query: 114 LAPRNVRSGLPPPXSKIVVNLT-LHLRHANIRESESTVRIQADLQMNWIDKRLSW-NAGE 287
L+ R + LPP + VN++ L L A+ ES ++ LQ W D RL + N +
Sbjct: 70 LSTRYDKRLLPPVQGTLTVNVSVLLLSLASPDESSLKYEVEFLLQQQWYDPRLRYSNRSQ 129
Query: 288 WGCSTWLVSSERLWRPDV--VLLNAAATTAGDYALRARVSNNGSVSWIKRLDISTPISMQ 461
+ + + +W PD ++ R+ NG+V+++ R + +
Sbjct: 130 YEFLNAIHHYDDIWLPDTYFIMHGDFKDPLIPVHFALRIYRNGTVNYLMRRHLILSCQGR 189
Query: 462 LDXWPNDMQTCTFKFGS 512
L+ +P D C+F S
Sbjct: 190 LNIFPFDDPLCSFAIES 206
Score = 21.8 bits (44), Expect = 9.0
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = -1
Query: 56 QVRRNGNKNNISRRHFI 6
++ RNG N + RRH I
Sbjct: 167 RIYRNGTVNYLMRRHLI 183
>DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride
channel variant 3 protein.
Length = 475
Score = 39.5 bits (88), Expect = 4e-05
Identities = 33/137 (24%), Positives = 59/137 (43%), Gaps = 4/137 (2%)
Frame = +3
Query: 114 LAPRNVRSGLPPPXSKIVVNLT-LHLRHANIRESESTVRIQADLQMNWIDKRLSW-NAGE 287
L+ R + LPP + VN++ L L A+ ES ++ LQ W D RL + N +
Sbjct: 70 LSTRYDKRLLPPVQGTLTVNVSVLLLSLASPDESSLKYEVEFLLQQQWYDPRLRYSNRSQ 129
Query: 288 WGCSTWLVSSERLWRPDV--VLLNAAATTAGDYALRARVSNNGSVSWIKRLDISTPISMQ 461
+ + + +W PD ++ R+ NG+V+++ R + +
Sbjct: 130 YEFLNAIHHYDDIWLPDTYFIMHGDFKDPLIPVHFALRIYRNGTVNYLMRRHLILSCQGR 189
Query: 462 LDXWPNDMQTCTFKFGS 512
L+ +P D C+F S
Sbjct: 190 LNIFPFDDPLCSFAIES 206
Score = 21.8 bits (44), Expect = 9.0
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = -1
Query: 56 QVRRNGNKNNISRRHFI 6
++ RNG N + RRH I
Sbjct: 167 RIYRNGTVNYLMRRHLI 183
>DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride
channel protein.
Length = 458
Score = 39.5 bits (88), Expect = 4e-05
Identities = 33/137 (24%), Positives = 59/137 (43%), Gaps = 4/137 (2%)
Frame = +3
Query: 114 LAPRNVRSGLPPPXSKIVVNLT-LHLRHANIRESESTVRIQADLQMNWIDKRLSW-NAGE 287
L+ R + LPP + VN++ L L A+ ES ++ LQ W D RL + N +
Sbjct: 70 LSTRYDKRLLPPVQGTLTVNVSVLLLSLASPDESSLKYEVEFLLQQQWYDPRLRYSNRSQ 129
Query: 288 WGCSTWLVSSERLWRPDV--VLLNAAATTAGDYALRARVSNNGSVSWIKRLDISTPISMQ 461
+ + + +W PD ++ R+ NG+V+++ R + +
Sbjct: 130 YEFLNAIHHYDDIWLPDTYFIMHGDFKDPLIPVHFALRIYRNGTVNYLMRRHLILSCQGR 189
Query: 462 LDXWPNDMQTCTFKFGS 512
L+ +P D C+F S
Sbjct: 190 LNIFPFDDPLCSFAIES 206
Score = 21.8 bits (44), Expect = 9.0
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = -1
Query: 56 QVRRNGNKNNISRRHFI 6
++ RNG N + RRH I
Sbjct: 167 RIYRNGTVNYLMRRHLI 183
>DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 38.7 bits (86), Expect = 7e-05
Identities = 33/127 (25%), Positives = 58/127 (45%), Gaps = 10/127 (7%)
Frame = +3
Query: 162 IVVNLTLH-LRHANIRESESTVRIQADLQMNWIDKRLSWNAGEWGCSTWLVSSE---RLW 329
+ V +T++ L +++ E + + + W D RL++ G T V SE +W
Sbjct: 36 VEVGVTMYVLSISSLSEVKMDFTLDFYFRQFWTDPRLAFKK-RTGVETLSVGSEFIKNIW 94
Query: 330 RPDVVLLNAA------ATTAGDYALRARVSNNGSVSWIKRLDISTPISMQLDXWPNDMQT 491
PD +N ATT+ ++ R+ ++GS++ RL I+ M L +P D Q
Sbjct: 95 VPDTFFVNEKQSYFHIATTSNEFI---RIHHSGSITRSIRLTITASCPMNLQYFPMDRQL 151
Query: 492 CTFKFGS 512
C + S
Sbjct: 152 CHIEIES 158
>DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 37.9 bits (84), Expect = 1e-04
Identities = 29/96 (30%), Positives = 44/96 (45%), Gaps = 9/96 (9%)
Frame = +3
Query: 252 WIDKRLSWNAGEWGCSTWLVSSE---RLWRPDVVLLNAA------ATTAGDYALRARVSN 404
W D RL++ G T V SE +W PD +N ATT+ ++ R+ +
Sbjct: 67 WTDPRLAFKK-RTGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFI---RIHH 122
Query: 405 NGSVSWIKRLDISTPISMQLDXWPNDMQTCTFKFGS 512
+GS++ RL I+ M L +P D Q C + S
Sbjct: 123 SGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIES 158
>AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl
subunit protein.
Length = 365
Score = 37.9 bits (84), Expect = 1e-04
Identities = 29/96 (30%), Positives = 44/96 (45%), Gaps = 9/96 (9%)
Frame = +3
Query: 252 WIDKRLSWNAGEWGCSTWLVSSE---RLWRPDVVLLNAA------ATTAGDYALRARVSN 404
W D RL++ G T V SE +W PD +N ATT+ ++ R+ +
Sbjct: 6 WTDPRLAFKK-RTGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFI---RIHH 61
Query: 405 NGSVSWIKRLDISTPISMQLDXWPNDMQTCTFKFGS 512
+GS++ RL I+ M L +P D Q C + S
Sbjct: 62 SGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIES 97
>DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride
channel variant 1 protein.
Length = 509
Score = 33.5 bits (73), Expect = 0.003
Identities = 28/121 (23%), Positives = 52/121 (42%), Gaps = 4/121 (3%)
Frame = +3
Query: 162 IVVNLT-LHLRHANIRESESTVRIQADLQMNWIDKRLSW-NAGEWGCSTWLVSSERLWRP 335
+ VN++ L L A+ ES ++ LQ W D RL + N ++ + + +W P
Sbjct: 137 LTVNVSVLLLSLASPDESSLKYEVEFLLQQQWYDPRLRYSNRSQYEFLNAIHHYDDIWLP 196
Query: 336 DV--VLLNAAATTAGDYALRARVSNNGSVSWIKRLDISTPISMQLDXWPNDMQTCTFKFG 509
D ++ R+ NG+V+++ R + +L+ +P D C+F
Sbjct: 197 DTYFIMHGDFKDPLIPVHFALRIYRNGTVNYLMRRHLILSCQGRLNIFPFDDPLCSFAIE 256
Query: 510 S 512
S
Sbjct: 257 S 257
Score = 21.8 bits (44), Expect = 9.0
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = -1
Query: 56 QVRRNGNKNNISRRHFI 6
++ RNG N + RRH I
Sbjct: 218 RIYRNGTVNYLMRRHLI 234
>DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chloride
channel protein.
Length = 383
Score = 32.3 bits (70), Expect = 0.006
Identities = 25/113 (22%), Positives = 47/113 (41%), Gaps = 5/113 (4%)
Frame = +3
Query: 198 NIRESESTVRIQADLQMNWIDKRLSW--NAGEWGCSTWLVSSERLWRPDVVLLNAAATTA 371
+I E T L +W D RL N E + +WRPD NA T
Sbjct: 43 SINEESMTYVADIFLAQSWRDSRLRLPENMSEDYRILDVDWLHNIWRPDCFFKNAKKVTF 102
Query: 372 GDYALRAR---VSNNGSVSWIKRLDISTPISMQLDXWPNDMQTCTFKFGSRMH 521
+ ++ + ++ ++ ++ +L + +M+ + +P+D Q C+ S H
Sbjct: 103 HEMSIPNHYLWLYHDKTLLYMSKLTLVLSCAMKFESYPHDTQICSMMIESLSH 155
>DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 391
Score = 30.3 bits (65), Expect = 0.026
Identities = 27/122 (22%), Positives = 52/122 (42%), Gaps = 11/122 (9%)
Frame = +3
Query: 162 IVVNLTLHLRHAN-IRESESTVRIQADLQMNWIDKRLS-----WNAGEWGCSTWLVSSER 323
++V+ + + N I + R+ ++ +WI+ RL + G+ + +
Sbjct: 11 VLVDFNIFVADINSINVEDMDFRVDMFVRQSWIESRLDMPDYIFEEGDDYVTLPPEFFDS 70
Query: 324 LWRPDVVLLNAAATTAGDYALRARVSN-----NGSVSWIKRLDISTPISMQLDXWPNDMQ 488
LW+PD LNA + AL + S+ N +V + R+ M+ +P D+Q
Sbjct: 71 LWQPDPYFLNAKVSEIA--ALNHKFSSVTLYRNKTVKYSARMHAIIACQMEFQLYPMDIQ 128
Query: 489 TC 494
C
Sbjct: 129 IC 130
>DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chloride
channel protein.
Length = 428
Score = 28.3 bits (60), Expect = 0.10
Identities = 15/71 (21%), Positives = 31/71 (43%), Gaps = 3/71 (4%)
Frame = +3
Query: 318 ERLWRPDVVLLNAAATTAGDYALRAR---VSNNGSVSWIKRLDISTPISMQLDXWPNDMQ 488
+ +WRPD NA + T + + + ++ ++ +L + +M +P+D Q
Sbjct: 116 KNMWRPDSFFKNAKSVTFQTMTIPNHYLWLYKDKTILYMVKLTLKLSCAMNFLIYPHDTQ 175
Query: 489 TCTFKFGSRMH 521
C + S H
Sbjct: 176 ECKLQMESLSH 186
>AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein.
Length = 735
Score = 22.6 bits (46), Expect = 5.1
Identities = 8/14 (57%), Positives = 10/14 (71%)
Frame = -1
Query: 305 PSAAAPLPCVPTQS 264
PSA AP+P +P S
Sbjct: 411 PSAGAPMPPIPNMS 424
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 212,885
Number of Sequences: 438
Number of extensions: 4551
Number of successful extensions: 91
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 47
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 51
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 29871933
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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