Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP03_FL5_L13
(851 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholi... 37 3e-04
DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channe... 36 6e-04
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 31 0.010
DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 31 0.013
DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chlor... 31 0.018
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 30 0.024
AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic ac... 30 0.031
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 29 0.054
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 29 0.054
DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholi... 29 0.054
AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic ac... 29 0.054
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 29 0.072
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 29 0.072
DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chlor... 28 0.13
DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 28 0.13
AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic ac... 28 0.13
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 27 0.29
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 27 0.29
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 27 0.29
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 27 0.29
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 27 0.29
DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chlor... 26 0.51
DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated... 25 0.88
DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholi... 25 0.88
DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chlor... 25 1.2
AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein. 23 3.6
>DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholine
receptor beta2subunit protein.
Length = 427
Score = 36.7 bits (81), Expect = 3e-04
Identities = 21/72 (29%), Positives = 34/72 (47%), Gaps = 5/72 (6%)
Frame = +2
Query: 113 CENATSLSLMIDS---LLATYDRDSPPDSKIV--VNLTLHLRHANIRESESTVRIQADLQ 277
C++ TS S + L YDRD P+ K ++ L ++H N+ E TV L+
Sbjct: 28 CKDITSTSALYRLKLYLFCDYDRDIIPEQKNATKIDFGLSIQHYNVDEYSHTVDFHVMLK 87
Query: 278 MSWIDKRLSWNA 313
+ W L+W +
Sbjct: 88 LMWEQSHLTWKS 99
Score = 22.6 bits (46), Expect = 4.7
Identities = 8/22 (36%), Positives = 11/22 (50%)
Frame = +1
Query: 505 WPNDMQTCTFKFGFRMHXSDEM 570
WP D+ CT H S+E+
Sbjct: 166 WPYDILNCTIHIASWSHGSNEI 187
>DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channel
protein.
Length = 463
Score = 35.5 bits (78), Expect = 6e-04
Identities = 20/70 (28%), Positives = 36/70 (51%), Gaps = 4/70 (5%)
Frame = +2
Query: 119 NATSLSLMIDSLLATYDRDSPPD---SKIVVNLTLHLRHAN-IRESESTVRIQADLQMSW 286
N +++S ++D+LL YD PD V + + +R I E + T + + SW
Sbjct: 2 NHSNISELLDNLLRGYDNSVRPDFGGPPATVEVDIMVRSMGPISEVDMTYSMDCYFRQSW 61
Query: 287 IDKRLSWNAG 316
+D+RL++ G
Sbjct: 62 VDRRLAFQGG 71
Score = 28.7 bits (61), Expect = 0.072
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = +1
Query: 463 RLDISTPISMQLDNWPNDMQTCTFKFG 543
RL I M L+N+P D Q C +FG
Sbjct: 123 RLTIKAGCPMNLENFPMDTQRCPLQFG 149
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 31.5 bits (68), Expect = 0.010
Identities = 15/39 (38%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = +3
Query: 342 VSSERLWRPDVVLL-NAAATTAGDYALRARVSNNGSVSW 455
V S+ +WRPD+VL NA A +A + + G V W
Sbjct: 105 VPSDHIWRPDIVLYNNADGNFEVTLATKATIYHQGLVEW 143
Score = 23.0 bits (47), Expect = 3.6
Identities = 8/18 (44%), Positives = 12/18 (66%)
Frame = +1
Query: 490 MQLDNWPNDMQTCTFKFG 543
+ ++ +P D QTC KFG
Sbjct: 155 IDVEYFPFDEQTCVLKFG 172
Score = 23.0 bits (47), Expect = 3.6
Identities = 10/31 (32%), Positives = 17/31 (54%)
Frame = -3
Query: 321 TPPAFQLSRLSIQLI*RSACIRTVDSDSRML 229
+PPAF SR ++ C+R + ++ML
Sbjct: 471 SPPAFSHSRCPPEIHKSCICVRFIAEHTKML 501
>DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine
receptor alpha3subunit protein.
Length = 566
Score = 31.1 bits (67), Expect = 0.013
Identities = 15/39 (38%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = +3
Query: 342 VSSERLWRPDVVLL-NAAATTAGDYALRARVSNNGSVSW 455
V S+ +WRPD+VL NA A +A ++ G V W
Sbjct: 101 VPSDHIWRPDIVLYNNADGNFEVTLATKATLNYTGRVEW 139
Score = 23.0 bits (47), Expect = 3.6
Identities = 8/18 (44%), Positives = 12/18 (66%)
Frame = +1
Query: 490 MQLDNWPNDMQTCTFKFG 543
+ ++ +P D QTC KFG
Sbjct: 151 IDVEYFPFDEQTCVMKFG 168
>DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 30.7 bits (66), Expect = 0.018
Identities = 20/73 (27%), Positives = 36/73 (49%), Gaps = 7/73 (9%)
Frame = +2
Query: 140 MIDSLLATYDRDSPP------DSKIVVNLTLHLRH-ANIRESESTVRIQADLQMSWIDKR 298
++D++L YD P D +V + L +R A I + + +Q + W+D+R
Sbjct: 35 VLDNILGGYDARIRPSGENATDGPAIVRVNLFVRSIATISDIKMEYSVQLTFREQWLDER 94
Query: 299 LSWNAGGVGLQHL 337
L +N G L++L
Sbjct: 95 LRFNDFGGRLKYL 107
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 30.3 bits (65), Expect = 0.024
Identities = 14/36 (38%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Frame = +3
Query: 342 VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGS 446
+ RLW+PDV++ N+A G Y V NNG+
Sbjct: 100 IPPHRLWKPDVLMYNSADEGFDGTYPTNVVVKNNGT 135
Score = 22.2 bits (45), Expect = 6.2
Identities = 17/83 (20%), Positives = 34/83 (40%), Gaps = 5/83 (6%)
Frame = +2
Query: 92 AIASAAECENATSLSLMIDSLLATYDRDSPP----DSKIVVNLTLHLRHA-NIRESESTV 256
A+A++ + +++ LL TY+ P +V++ L L ++ E +
Sbjct: 11 ALAASGLVNGGSHEKRLLNDLLDTYNVLERPVGNESEPLVLSFGLTLMQIIDVDEKNQLL 70
Query: 257 RIQADLQMSWIDKRLSWNAGGVG 325
L++ W D + WN G
Sbjct: 71 ITNLWLKLEWNDVNMRWNVSDYG 93
>AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha-3 protein.
Length = 537
Score = 29.9 bits (64), Expect = 0.031
Identities = 18/48 (37%), Positives = 24/48 (50%), Gaps = 4/48 (8%)
Frame = +3
Query: 324 GCSTWLVSSERLWRPDVVLLNAAATTAGDYAL----RARVSNNGSVSW 455
G V SE +W PD+VL N A G+Y + +A + G VSW
Sbjct: 104 GVEMLYVPSENIWLPDIVLYNNA---DGNYEVTLMTKATLKYTGDVSW 148
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 29.1 bits (62), Expect = 0.054
Identities = 12/36 (33%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Frame = +3
Query: 342 VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGS 446
++ +LW+PD+++ N+A G Y V++NGS
Sbjct: 131 ITPNKLWKPDILMYNSADEGFDGTYQTNVVVTHNGS 166
Score = 25.4 bits (53), Expect = 0.67
Identities = 9/32 (28%), Positives = 15/32 (46%)
Frame = +2
Query: 230 NIRESESTVRIQADLQMSWIDKRLSWNAGGVG 325
++ E + A L++ W+D L WN G
Sbjct: 93 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYG 124
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 29.1 bits (62), Expect = 0.054
Identities = 12/36 (33%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Frame = +3
Query: 342 VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGS 446
++ +LW+PD+++ N+A G Y V++NGS
Sbjct: 131 ITPNKLWKPDILMYNSADEGFDGTYQTNVVVTHNGS 166
Score = 25.4 bits (53), Expect = 0.67
Identities = 9/32 (28%), Positives = 15/32 (46%)
Frame = +2
Query: 230 NIRESESTVRIQADLQMSWIDKRLSWNAGGVG 325
++ E + A L++ W+D L WN G
Sbjct: 93 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYG 124
>DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholine
receptor alpha1subunit protein.
Length = 601
Score = 29.1 bits (62), Expect = 0.054
Identities = 18/48 (37%), Positives = 25/48 (52%), Gaps = 4/48 (8%)
Frame = +3
Query: 324 GCSTWLVSSERLWRPDVVLLNAAATTAGDYAL----RARVSNNGSVSW 455
G T V SE +W PD+VL N A G+Y + +A + + G V W
Sbjct: 91 GVDTLHVPSEHIWLPDIVLYNNA---DGNYEVTIMTKAILHHTGKVVW 135
Score = 22.2 bits (45), Expect = 6.2
Identities = 8/18 (44%), Positives = 12/18 (66%)
Frame = +1
Query: 490 MQLDNWPNDMQTCTFKFG 543
+ ++ +P D QTC KFG
Sbjct: 147 IDVEYFPFDEQTCFMKFG 164
>AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic
acetylcholine receptorApisa2 subunit protein.
Length = 541
Score = 29.1 bits (62), Expect = 0.054
Identities = 19/48 (39%), Positives = 25/48 (52%), Gaps = 2/48 (4%)
Frame = +3
Query: 318 EWGCSTWL-VSSERLWRPDVVLLNAAATTAGDYAL-RARVSNNGSVSW 455
E+G T L V SE +W PD+VL N A G + +A + G V W
Sbjct: 88 EYGGVTELYVPSEHIWLPDIVLYNNADGEYGVTTMTKAILHYTGKVLW 135
Score = 22.2 bits (45), Expect = 6.2
Identities = 8/13 (61%), Positives = 9/13 (69%)
Frame = +1
Query: 505 WPNDMQTCTFKFG 543
+P D QTC KFG
Sbjct: 152 FPFDQQTCFMKFG 164
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 28.7 bits (61), Expect = 0.072
Identities = 12/36 (33%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Frame = +3
Query: 342 VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGS 446
++ +LW+PD+++ N+A G Y V++NGS
Sbjct: 63 ITPNKLWKPDILMYNSADEGFDGTYQTSVVVTHNGS 98
Score = 25.4 bits (53), Expect = 0.67
Identities = 9/32 (28%), Positives = 15/32 (46%)
Frame = +2
Query: 230 NIRESESTVRIQADLQMSWIDKRLSWNAGGVG 325
++ E + A L++ W+D L WN G
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYG 56
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 28.7 bits (61), Expect = 0.072
Identities = 17/42 (40%), Positives = 24/42 (57%), Gaps = 4/42 (9%)
Frame = +3
Query: 342 VSSERLWRPDVVLLNAAATTAGDYAL----RARVSNNGSVSW 455
V S+ +WRPD+VL N A G+Y + +A V +G V W
Sbjct: 105 VPSDHIWRPDIVLYNNA---DGNYEVTLMTKATVYYSGLVVW 143
Score = 23.4 bits (48), Expect = 2.7
Identities = 8/19 (42%), Positives = 13/19 (68%)
Frame = +1
Query: 487 SMQLDNWPNDMQTCTFKFG 543
S+ ++ +P D+QTC K G
Sbjct: 154 SIDVEFFPYDVQTCVLKLG 172
Score = 23.0 bits (47), Expect = 3.6
Identities = 10/31 (32%), Positives = 17/31 (54%)
Frame = -3
Query: 321 TPPAFQLSRLSIQLI*RSACIRTVDSDSRML 229
+PPAF SR ++ C+R + ++ML
Sbjct: 471 SPPAFSHSRCPPEIHKSCICVRFIAEHTKML 501
>DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 27.9 bits (59), Expect = 0.13
Identities = 19/73 (26%), Positives = 35/73 (47%), Gaps = 7/73 (9%)
Frame = +2
Query: 140 MIDSLLATYDRDSPP------DSKIVVNLTLHLRH-ANIRESESTVRIQADLQMSWIDKR 298
++D++L YD P D VV + + +R + I + +Q + W+D+R
Sbjct: 35 VLDNILGGYDARIRPSGENATDGPAVVRVNIFVRSISKIDDVTMEYSVQLTFREQWLDER 94
Query: 299 LSWNAGGVGLQHL 337
L +N G L++L
Sbjct: 95 LRFNDFGGRLKYL 107
>DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine
receptor beta1subunit protein.
Length = 520
Score = 27.9 bits (59), Expect = 0.13
Identities = 14/39 (35%), Positives = 23/39 (58%), Gaps = 4/39 (10%)
Frame = +3
Query: 351 ERLWRPDVVLLNAAATTAGDYALRAR----VSNNGSVSW 455
+++W+PD+VL N A G+Y +R + + NG V W
Sbjct: 106 DKVWKPDIVLFNNA---DGNYEVRYKSNVLIYPNGDVLW 141
Score = 26.2 bits (55), Expect = 0.38
Identities = 15/53 (28%), Positives = 26/53 (49%), Gaps = 4/53 (7%)
Frame = +2
Query: 191 KIVVNLTL-HLRHANIRESESTVRIQADLQMSWIDKRLSWNA---GGVGLQHL 337
K+ VN L ++ N+ E ++ L+ W D +L W+ GG+G+ L
Sbjct: 51 KVHVNFGLAFVQLINVNEKNQIMKSNVWLRFIWTDYQLQWDEADYGGIGVLRL 103
Score = 23.0 bits (47), Expect = 3.6
Identities = 9/22 (40%), Positives = 12/22 (54%)
Frame = +1
Query: 505 WPNDMQTCTFKFGFRMHXSDEM 570
+P D QTC KFG D++
Sbjct: 158 FPFDQQTCIMKFGSWTFNGDQV 179
>AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic
acetylcholine Apisa7-2 subunit protein.
Length = 461
Score = 27.9 bits (59), Expect = 0.13
Identities = 14/40 (35%), Positives = 18/40 (45%), Gaps = 2/40 (5%)
Frame = +3
Query: 342 VSSERLWRPDVVLLNAAATTAGDYALRAR--VSNNGSVSW 455
V R+WRPD +L N A + VS+ G V W
Sbjct: 82 VPYNRVWRPDTILYNNADPQYSSAVINTNVIVSHTGEVVW 121
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 26.6 bits (56), Expect = 0.29
Identities = 11/36 (30%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Frame = +3
Query: 342 VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGS 446
++ +LW+PD+++ N+A G Y V+++GS
Sbjct: 63 ITPNKLWKPDILMYNSADEGFDGTYQTSVVVTHDGS 98
Score = 25.4 bits (53), Expect = 0.67
Identities = 9/32 (28%), Positives = 15/32 (46%)
Frame = +2
Query: 230 NIRESESTVRIQADLQMSWIDKRLSWNAGGVG 325
++ E + A L++ W+D L WN G
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYG 56
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 26.6 bits (56), Expect = 0.29
Identities = 11/36 (30%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Frame = +3
Query: 342 VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGS 446
++ +LW+PD+++ N+A G Y V+++GS
Sbjct: 63 ITPNKLWKPDILMYNSADEGFDGTYQTSVVVTHDGS 98
Score = 25.4 bits (53), Expect = 0.67
Identities = 9/32 (28%), Positives = 15/32 (46%)
Frame = +2
Query: 230 NIRESESTVRIQADLQMSWIDKRLSWNAGGVG 325
++ E + A L++ W+D L WN G
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYG 56
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 26.6 bits (56), Expect = 0.29
Identities = 11/36 (30%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Frame = +3
Query: 342 VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGS 446
++ +LW+PD+++ N+A G Y V+++GS
Sbjct: 63 ITPNKLWKPDILMYNSADEGFDGTYQTSVVVTHDGS 98
Score = 25.4 bits (53), Expect = 0.67
Identities = 9/32 (28%), Positives = 15/32 (46%)
Frame = +2
Query: 230 NIRESESTVRIQADLQMSWIDKRLSWNAGGVG 325
++ E + A L++ W+D L WN G
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYG 56
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 26.6 bits (56), Expect = 0.29
Identities = 11/36 (30%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Frame = +3
Query: 342 VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGS 446
++ +LW+PD+++ N+A G Y V+++GS
Sbjct: 63 ITPNKLWKPDILMYNSADEGFDGTYQTSVVVTHDGS 98
Score = 25.4 bits (53), Expect = 0.67
Identities = 9/32 (28%), Positives = 15/32 (46%)
Frame = +2
Query: 230 NIRESESTVRIQADLQMSWIDKRLSWNAGGVG 325
++ E + A L++ W+D L WN G
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYG 56
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 26.6 bits (56), Expect = 0.29
Identities = 11/36 (30%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Frame = +3
Query: 342 VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGS 446
++ +LW+PD+++ N+A G Y V+++GS
Sbjct: 63 ITPNKLWKPDILMYNSADEGFDGTYQTSVVVTHDGS 98
Score = 25.4 bits (53), Expect = 0.67
Identities = 9/32 (28%), Positives = 15/32 (46%)
Frame = +2
Query: 230 NIRESESTVRIQADLQMSWIDKRLSWNAGGVG 325
++ E + A L++ W+D L WN G
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYG 56
>DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chloride
channel protein.
Length = 428
Score = 25.8 bits (54), Expect = 0.51
Identities = 11/39 (28%), Positives = 19/39 (48%)
Frame = +1
Query: 463 RLDISTPISMQLDNWPNDMQTCTFKFGFRMHXSDEMXFR 579
+L + +M +P+D Q C + H +DEM F+
Sbjct: 156 KLTLKLSCAMNFLIYPHDTQECKLQMESLSHTTDEMIFQ 194
>DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 510
Score = 25.0 bits (52), Expect = 0.88
Identities = 11/27 (40%), Positives = 14/27 (51%)
Frame = +1
Query: 463 RLDISTPISMQLDNWPNDMQTCTFKFG 543
RL I M+L N+P D Q+C G
Sbjct: 155 RLTIKAKCPMELRNFPMDRQSCPLILG 181
Score = 22.2 bits (45), Expect = 6.2
Identities = 7/12 (58%), Positives = 8/12 (66%)
Frame = +3
Query: 351 ERLWRPDVVLLN 386
ER+WRPD N
Sbjct: 115 ERIWRPDTYFYN 126
>DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholine
receptor alpha9subunit protein.
Length = 431
Score = 25.0 bits (52), Expect = 0.88
Identities = 8/23 (34%), Positives = 12/23 (52%)
Frame = +1
Query: 502 NWPNDMQTCTFKFGFRMHXSDEM 570
+WP D C FG +H +E+
Sbjct: 175 SWPYDTHRCRINFGSWVHSGEEV 197
Score = 24.6 bits (51), Expect = 1.2
Identities = 17/68 (25%), Positives = 32/68 (47%), Gaps = 4/68 (5%)
Frame = +2
Query: 116 ENATSLSLMIDSLLATYDRDSPPDS--KIVVNLTLHL--RHANIRESESTVRIQADLQMS 283
++ T+L + L YD + P S +I N+T+ L + + S + + + + +
Sbjct: 39 DHPTTLLKLKRYLFCEYDPNVRPISSHQIANNVTMQLLPKLMEFDDWTSVMELHSWMTLM 98
Query: 284 WIDKRLSW 307
W D LSW
Sbjct: 99 WTDSHLSW 106
>DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chloride
channel protein.
Length = 383
Score = 24.6 bits (51), Expect = 1.2
Identities = 8/40 (20%), Positives = 21/40 (52%)
Frame = +1
Query: 457 IKRLDISTPISMQLDNWPNDMQTCTFKFGFRMHXSDEMXF 576
+ +L + +M+ +++P+D Q C+ H + ++ F
Sbjct: 123 MSKLTLVLSCAMKFESYPHDTQICSMMIESLSHTTQDLVF 162
>AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein.
Length = 898
Score = 23.0 bits (47), Expect = 3.6
Identities = 10/34 (29%), Positives = 18/34 (52%)
Frame = +1
Query: 508 PNDMQTCTFKFGFRMHXSDEMXFRD*XKNIXYVR 609
P D++ FK+G+ H + ++ KN+ Y R
Sbjct: 655 PQDIENI-FKYGYVSHANQRNMYKLDLKNMKYTR 687
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 208,891
Number of Sequences: 438
Number of extensions: 4692
Number of successful extensions: 59
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 34
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 59
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 27431202
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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