Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP03_FL5_L12
(892 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholi... 36 4e-04
DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channe... 34 0.002
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 34 0.002
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 33 0.003
DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 33 0.004
DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 33 0.005
AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic ac... 32 0.008
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 31 0.011
DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chlor... 31 0.019
AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic ac... 31 0.019
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 30 0.025
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 30 0.025
DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholi... 30 0.025
AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic ac... 30 0.025
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 30 0.033
DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated... 30 0.033
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 28 0.13
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 28 0.13
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 28 0.13
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 28 0.13
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 28 0.13
DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chlor... 28 0.13
DQ011226-1|AAY63895.1| 471|Apis mellifera Rh-like protein protein. 23 4.9
DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated... 22 6.5
DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chlor... 22 6.5
>DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholine
receptor beta2subunit protein.
Length = 427
Score = 36.3 bits (80), Expect = 4e-04
Identities = 21/72 (29%), Positives = 34/72 (47%), Gaps = 5/72 (6%)
Frame = +2
Query: 113 CENATSLSLMIDS---LLATYDRDSPPDSKIV--VNLTLHLRHANIRESESTVRIQADLQ 277
C++ TS S + L YDRD P+ K ++ L ++H N+ E TV L+
Sbjct: 28 CKDITSTSALYRLKLYLFCDYDRDIIPEQKNATKIDFGLSIQHYNVDEYSHTVDFHVMLK 87
Query: 278 MNWIDKRLSWNA 313
+ W L+W +
Sbjct: 88 LMWEQSHLTWKS 99
>DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channel
protein.
Length = 463
Score = 34.3 bits (75), Expect = 0.002
Identities = 19/70 (27%), Positives = 36/70 (51%), Gaps = 4/70 (5%)
Frame = +2
Query: 119 NATSLSLMIDSLLATYDRDSPPD---SKIVVNLTLHLRHAN-IRESESTVRIQADLQMNW 286
N +++S ++D+LL YD PD V + + +R I E + T + + +W
Sbjct: 2 NHSNISELLDNLLRGYDNSVRPDFGGPPATVEVDIMVRSMGPISEVDMTYSMDCYFRQSW 61
Query: 287 IDKRLSWNAG 316
+D+RL++ G
Sbjct: 62 VDRRLAFQGG 71
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 33.9 bits (74), Expect = 0.002
Identities = 21/66 (31%), Positives = 34/66 (51%), Gaps = 4/66 (6%)
Frame = +3
Query: 342 VSSERLWRPDVVLLNAAATTXGDYAL----RARVSNNGSVSWIKRLDIXTPISMXLDXWX 509
V S+ +WRPD+VL N A G+Y + +A V +G V W + S+ ++ +
Sbjct: 105 VPSDHIWRPDIVLYNNA---DGNYEVTLMTKATVYYSGLVVWQPPAVYKSSCSIDVEFFP 161
Query: 510 XDMXTC 527
D+ TC
Sbjct: 162 YDVQTC 167
Score = 22.2 bits (45), Expect = 6.5
Identities = 10/31 (32%), Positives = 16/31 (51%)
Frame = -2
Query: 321 TPPAFQLSRLSIQFI*RSACIRTVDSDSRML 229
+PPAF SR + C+R + ++ML
Sbjct: 471 SPPAFSHSRCPPEIHKSCICVRFIAEHTKML 501
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 33.5 bits (73), Expect = 0.003
Identities = 18/63 (28%), Positives = 29/63 (46%), Gaps = 1/63 (1%)
Frame = +3
Query: 342 VSSERLWRPDVVLL-NAAATTXGDYALRARVSNNGSVSWIKRLDIXTPISMXLDXWXXDM 518
V S+ +WRPD+VL NA A +A + + G V W + + ++ + D
Sbjct: 105 VPSDHIWRPDIVLYNNADGNFEVTLATKATIYHQGLVEWKPPAIYKSSCEIDVEYFPFDE 164
Query: 519 XTC 527
TC
Sbjct: 165 QTC 167
Score = 22.2 bits (45), Expect = 6.5
Identities = 10/31 (32%), Positives = 16/31 (51%)
Frame = -2
Query: 321 TPPAFQLSRLSIQFI*RSACIRTVDSDSRML 229
+PPAF SR + C+R + ++ML
Sbjct: 471 SPPAFSHSRCPPEIHKSCICVRFIAEHTKML 501
>DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine
receptor alpha3subunit protein.
Length = 566
Score = 33.1 bits (72), Expect = 0.004
Identities = 18/63 (28%), Positives = 29/63 (46%), Gaps = 1/63 (1%)
Frame = +3
Query: 342 VSSERLWRPDVVLL-NAAATTXGDYALRARVSNNGSVSWIKRLDIXTPISMXLDXWXXDM 518
V S+ +WRPD+VL NA A +A ++ G V W + + ++ + D
Sbjct: 101 VPSDHIWRPDIVLYNNADGNFEVTLATKATLNYTGRVEWKPPAIYKSSCEIDVEYFPFDE 160
Query: 519 XTC 527
TC
Sbjct: 161 QTC 163
>DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine
receptor beta1subunit protein.
Length = 520
Score = 32.7 bits (71), Expect = 0.005
Identities = 17/63 (26%), Positives = 32/63 (50%), Gaps = 4/63 (6%)
Frame = +3
Query: 351 ERLWRPDVVLLNAAATTXGDYALRAR----VSNNGSVSWIKRLDIXTPISMXLDXWXXDM 518
+++W+PD+VL N A G+Y +R + + NG V W+ + ++ + + D
Sbjct: 106 DKVWKPDIVLFNNA---DGNYEVRYKSNVLIYPNGDVLWVPPAIYQSSCTIDVTYFPFDQ 162
Query: 519 XTC 527
TC
Sbjct: 163 QTC 165
Score = 25.8 bits (54), Expect = 0.53
Identities = 15/53 (28%), Positives = 26/53 (49%), Gaps = 4/53 (7%)
Frame = +2
Query: 191 KIVVNLTL-HLRHANIRESESTVRIQADLQMNWIDKRLSWNA---GGVGLQHL 337
K+ VN L ++ N+ E ++ L+ W D +L W+ GG+G+ L
Sbjct: 51 KVHVNFGLAFVQLINVNEKNQIMKSNVWLRFIWTDYQLQWDEADYGGIGVLRL 103
>AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic
acetylcholine receptorApisa2 subunit protein.
Length = 541
Score = 31.9 bits (69), Expect = 0.008
Identities = 22/72 (30%), Positives = 32/72 (44%), Gaps = 2/72 (2%)
Frame = +3
Query: 318 EWGCSTWL-VSSERLWRPDVVLLNAAATTXGDYAL-RARVSNNGSVSWIKRLDIXTPISM 491
E+G T L V SE +W PD+VL N A G + +A + G V W + +
Sbjct: 88 EYGGVTELYVPSEHIWLPDIVLYNNADGEYGVTTMTKAILHYTGKVLWTPPAIFKSSCEI 147
Query: 492 XLDXWXXDMXTC 527
+ + D TC
Sbjct: 148 DVRYFPFDQQTC 159
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 31.5 bits (68), Expect = 0.011
Identities = 14/40 (35%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Frame = +3
Query: 342 VSSERLWRPDVVLLNAA-ATTXGDYALRARVSNNGSVSWI 458
+ RLW+PDV++ N+A G Y V NNG+ ++
Sbjct: 100 IPPHRLWKPDVLMYNSADEGFDGTYPTNVVVKNNGTCLYV 139
Score = 22.2 bits (45), Expect = 6.5
Identities = 17/83 (20%), Positives = 34/83 (40%), Gaps = 5/83 (6%)
Frame = +2
Query: 92 AIASAAECENATSLSLMIDSLLATYDRDSPP----DSKIVVNLTLHLRHA-NIRESESTV 256
A+A++ + +++ LL TY+ P +V++ L L ++ E +
Sbjct: 11 ALAASGLVNGGSHEKRLLNDLLDTYNVLERPVGNESEPLVLSFGLTLMQIIDVDEKNQLL 70
Query: 257 RIQADLQMNWIDKRLSWNAGGVG 325
L++ W D + WN G
Sbjct: 71 ITNLWLKLEWNDVNMRWNVSDYG 93
>DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 30.7 bits (66), Expect = 0.019
Identities = 20/73 (27%), Positives = 36/73 (49%), Gaps = 7/73 (9%)
Frame = +2
Query: 140 MIDSLLATYDRDSPP------DSKIVVNLTLHLRH-ANIRESESTVRIQADLQMNWIDKR 298
++D++L YD P D +V + L +R A I + + +Q + W+D+R
Sbjct: 35 VLDNILGGYDARIRPSGENATDGPAIVRVNLFVRSIATISDIKMEYSVQLTFREQWLDER 94
Query: 299 LSWNAGGVGLQHL 337
L +N G L++L
Sbjct: 95 LRFNDFGGRLKYL 107
>AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha-3 protein.
Length = 537
Score = 30.7 bits (66), Expect = 0.019
Identities = 20/72 (27%), Positives = 32/72 (44%), Gaps = 4/72 (5%)
Frame = +3
Query: 324 GCSTWLVSSERLWRPDVVLLNAAATTXGDYAL----RARVSNNGSVSWIKRLDIXTPISM 491
G V SE +W PD+VL N A G+Y + +A + G VSW + +
Sbjct: 104 GVEMLYVPSENIWLPDIVLYNNA---DGNYEVTLMTKATLKYTGDVSWKPPAIYKSSCEI 160
Query: 492 XLDXWXXDMXTC 527
++ + D +C
Sbjct: 161 NVEYFPFDEQSC 172
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 30.3 bits (65), Expect = 0.025
Identities = 12/40 (30%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Frame = +3
Query: 342 VSSERLWRPDVVLLNAA-ATTXGDYALRARVSNNGSVSWI 458
++ +LW+PD+++ N+A G Y V++NGS ++
Sbjct: 131 ITPNKLWKPDILMYNSADEGFDGTYQTNVVVTHNGSCLYV 170
Score = 25.4 bits (53), Expect = 0.70
Identities = 9/32 (28%), Positives = 15/32 (46%)
Frame = +2
Query: 230 NIRESESTVRIQADLQMNWIDKRLSWNAGGVG 325
++ E + A L++ W+D L WN G
Sbjct: 93 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYG 124
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 30.3 bits (65), Expect = 0.025
Identities = 12/40 (30%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Frame = +3
Query: 342 VSSERLWRPDVVLLNAA-ATTXGDYALRARVSNNGSVSWI 458
++ +LW+PD+++ N+A G Y V++NGS ++
Sbjct: 131 ITPNKLWKPDILMYNSADEGFDGTYQTNVVVTHNGSCLYV 170
Score = 25.4 bits (53), Expect = 0.70
Identities = 9/32 (28%), Positives = 15/32 (46%)
Frame = +2
Query: 230 NIRESESTVRIQADLQMNWIDKRLSWNAGGVG 325
++ E + A L++ W+D L WN G
Sbjct: 93 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYG 124
>DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholine
receptor alpha1subunit protein.
Length = 601
Score = 30.3 bits (65), Expect = 0.025
Identities = 21/72 (29%), Positives = 33/72 (45%), Gaps = 4/72 (5%)
Frame = +3
Query: 324 GCSTWLVSSERLWRPDVVLLNAAATTXGDYAL----RARVSNNGSVSWIKRLDIXTPISM 491
G T V SE +W PD+VL N A G+Y + +A + + G V W + +
Sbjct: 91 GVDTLHVPSEHIWLPDIVLYNNA---DGNYEVTIMTKAILHHTGKVVWKPPAIYKSFCEI 147
Query: 492 XLDXWXXDMXTC 527
++ + D TC
Sbjct: 148 DVEYFPFDEQTC 159
>AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic
acetylcholine Apisa7-2 subunit protein.
Length = 461
Score = 30.3 bits (65), Expect = 0.025
Identities = 16/64 (25%), Positives = 26/64 (40%), Gaps = 2/64 (3%)
Frame = +3
Query: 342 VSSERLWRPDVVLLNAAATTXGDYALRAR--VSNNGSVSWIKRLDIXTPISMXLDXWXXD 515
V R+WRPD +L N A + VS+ G V W+ + + ++ + D
Sbjct: 82 VPYNRVWRPDTILYNNADPQYSSAVINTNVIVSHTGEVVWLSHGIFRSSCDIDVEFFPFD 141
Query: 516 MXTC 527
C
Sbjct: 142 EQRC 145
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 29.9 bits (64), Expect = 0.033
Identities = 12/40 (30%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Frame = +3
Query: 342 VSSERLWRPDVVLLNAA-ATTXGDYALRARVSNNGSVSWI 458
++ +LW+PD+++ N+A G Y V++NGS ++
Sbjct: 63 ITPNKLWKPDILMYNSADEGFDGTYQTSVVVTHNGSCLYV 102
Score = 25.4 bits (53), Expect = 0.70
Identities = 9/32 (28%), Positives = 15/32 (46%)
Frame = +2
Query: 230 NIRESESTVRIQADLQMNWIDKRLSWNAGGVG 325
++ E + A L++ W+D L WN G
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYG 56
>DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 510
Score = 29.9 bits (64), Expect = 0.033
Identities = 17/62 (27%), Positives = 26/62 (41%), Gaps = 3/62 (4%)
Frame = +3
Query: 351 ERLWRPDVVLLNAAATTXGDYAL---RARVSNNGSVSWIKRLDIXTPISMXLDXWXXDMX 521
ER+WRPD N + + R+S +G + + RL I M L + D
Sbjct: 115 ERIWRPDTYFYNGKHSYVHTITVPNKLLRISQDGDILYSMRLTIKAKCPMELRNFPMDRQ 174
Query: 522 TC 527
+C
Sbjct: 175 SC 176
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 27.9 bits (59), Expect = 0.13
Identities = 11/40 (27%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Frame = +3
Query: 342 VSSERLWRPDVVLLNAA-ATTXGDYALRARVSNNGSVSWI 458
++ +LW+PD+++ N+A G Y V+++GS ++
Sbjct: 63 ITPNKLWKPDILMYNSADEGFDGTYQTSVVVTHDGSCLYV 102
Score = 25.4 bits (53), Expect = 0.70
Identities = 9/32 (28%), Positives = 15/32 (46%)
Frame = +2
Query: 230 NIRESESTVRIQADLQMNWIDKRLSWNAGGVG 325
++ E + A L++ W+D L WN G
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYG 56
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 27.9 bits (59), Expect = 0.13
Identities = 11/40 (27%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Frame = +3
Query: 342 VSSERLWRPDVVLLNAA-ATTXGDYALRARVSNNGSVSWI 458
++ +LW+PD+++ N+A G Y V+++GS ++
Sbjct: 63 ITPNKLWKPDILMYNSADEGFDGTYQTSVVVTHDGSCLYV 102
Score = 25.4 bits (53), Expect = 0.70
Identities = 9/32 (28%), Positives = 15/32 (46%)
Frame = +2
Query: 230 NIRESESTVRIQADLQMNWIDKRLSWNAGGVG 325
++ E + A L++ W+D L WN G
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYG 56
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 27.9 bits (59), Expect = 0.13
Identities = 11/40 (27%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Frame = +3
Query: 342 VSSERLWRPDVVLLNAA-ATTXGDYALRARVSNNGSVSWI 458
++ +LW+PD+++ N+A G Y V+++GS ++
Sbjct: 63 ITPNKLWKPDILMYNSADEGFDGTYQTSVVVTHDGSCLYV 102
Score = 25.4 bits (53), Expect = 0.70
Identities = 9/32 (28%), Positives = 15/32 (46%)
Frame = +2
Query: 230 NIRESESTVRIQADLQMNWIDKRLSWNAGGVG 325
++ E + A L++ W+D L WN G
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYG 56
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 27.9 bits (59), Expect = 0.13
Identities = 11/40 (27%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Frame = +3
Query: 342 VSSERLWRPDVVLLNAA-ATTXGDYALRARVSNNGSVSWI 458
++ +LW+PD+++ N+A G Y V+++GS ++
Sbjct: 63 ITPNKLWKPDILMYNSADEGFDGTYQTSVVVTHDGSCLYV 102
Score = 25.4 bits (53), Expect = 0.70
Identities = 9/32 (28%), Positives = 15/32 (46%)
Frame = +2
Query: 230 NIRESESTVRIQADLQMNWIDKRLSWNAGGVG 325
++ E + A L++ W+D L WN G
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYG 56
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 27.9 bits (59), Expect = 0.13
Identities = 11/40 (27%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Frame = +3
Query: 342 VSSERLWRPDVVLLNAA-ATTXGDYALRARVSNNGSVSWI 458
++ +LW+PD+++ N+A G Y V+++GS ++
Sbjct: 63 ITPNKLWKPDILMYNSADEGFDGTYQTSVVVTHDGSCLYV 102
Score = 25.4 bits (53), Expect = 0.70
Identities = 9/32 (28%), Positives = 15/32 (46%)
Frame = +2
Query: 230 NIRESESTVRIQADLQMNWIDKRLSWNAGGVG 325
++ E + A L++ W+D L WN G
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYG 56
>DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 27.9 bits (59), Expect = 0.13
Identities = 19/73 (26%), Positives = 35/73 (47%), Gaps = 7/73 (9%)
Frame = +2
Query: 140 MIDSLLATYDRDSPP------DSKIVVNLTLHLRH-ANIRESESTVRIQADLQMNWIDKR 298
++D++L YD P D VV + + +R + I + +Q + W+D+R
Sbjct: 35 VLDNILGGYDARIRPSGENATDGPAVVRVNIFVRSISKIDDVTMEYSVQLTFREQWLDER 94
Query: 299 LSWNAGGVGLQHL 337
L +N G L++L
Sbjct: 95 LRFNDFGGRLKYL 107
>DQ011226-1|AAY63895.1| 471|Apis mellifera Rh-like protein protein.
Length = 471
Score = 22.6 bits (46), Expect = 4.9
Identities = 14/61 (22%), Positives = 30/61 (49%), Gaps = 4/61 (6%)
Frame = +2
Query: 191 KIVVNLTLHLRHANIRESESTVRIQADLQMNWIDKRLSWNAGGVGLQHLAGVL----GTL 358
+ ++N L + + + ++ + D + N + + S AGGV + AG++ GTL
Sbjct: 239 RAIINTLLSISASCVIAFATSALVSKDSKFNMVHIQNSTLAGGVAIGTAAGMMCQPVGTL 298
Query: 359 V 361
+
Sbjct: 299 I 299
>DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 391
Score = 22.2 bits (45), Expect = 6.5
Identities = 16/64 (25%), Positives = 26/64 (40%), Gaps = 5/64 (7%)
Frame = +3
Query: 351 ERLWRPDVVLLNAAATTXGDYALRARVSN-----NGSVSWIKRLDIXTPISMXLDXWXXD 515
+ LW+PD LNA + AL + S+ N +V + R+ M + D
Sbjct: 69 DSLWQPDPYFLNAKVSEIA--ALNHKFSSVTLYRNKTVKYSARMHAIIACQMEFQLYPMD 126
Query: 516 MXTC 527
+ C
Sbjct: 127 IQIC 130
>DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chloride
channel protein.
Length = 383
Score = 22.2 bits (45), Expect = 6.5
Identities = 11/60 (18%), Positives = 27/60 (45%), Gaps = 3/60 (5%)
Frame = +3
Query: 357 LWRPDVVLLNAAATTXGDYALRAR---VSNNGSVSWIKRLDIXTPISMXLDXWXXDMXTC 527
+WRPD NA T + ++ + ++ ++ ++ +L + +M + + D C
Sbjct: 87 IWRPDCFFKNAKKVTFHEMSIPNHYLWLYHDKTLLYMSKLTLVLSCAMKFESYPHDTQIC 146
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 158,365
Number of Sequences: 438
Number of extensions: 3401
Number of successful extensions: 49
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 49
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 28783482
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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