BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP03_FL5_L08
(837 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC037582-1|AAH37582.1| 349|Homo sapiens ATXN7L2 protein protein. 36 0.14
AL355145-2|CAI22938.1| 349|Homo sapiens ataxin 7-like 2 protein. 36 0.14
AL355145-1|CAI22937.1| 722|Homo sapiens ataxin 7-like 2 protein. 36 0.14
BC063806-1|AAH63806.1| 1542|Homo sapiens PPRC1 protein protein. 34 0.56
BC016681-1|AAH16681.1| 473|Homo sapiens BRSK1 protein protein. 34 0.56
AY505124-1|AAS86442.1| 778|Homo sapiens protein kinase SAD-B pr... 34 0.56
AY458602-1|AAS10354.1| 778|Homo sapiens SAD1 kinase protein. 34 0.56
AF479827-1|AAL87698.1| 778|Homo sapiens protein kinase-like pro... 34 0.56
AF479826-1|AAL87697.1| 794|Homo sapiens putative serine/threoni... 34 0.56
AB058714-1|BAB47440.1| 715|Homo sapiens KIAA1811 protein protein. 34 0.56
BC036187-1|AAH36187.1| 904|Homo sapiens serine/arginine repetit... 34 0.73
AL445686-4|CAI14682.1| 904|Homo sapiens serine/arginine repetit... 34 0.73
AL445648-3|CAH73090.1| 904|Homo sapiens serine/arginine repetit... 34 0.73
AF419855-1|AAP97290.1| 820|Homo sapiens Ser/Arg-related nuclear... 34 0.73
AF048977-1|AAC09321.1| 820|Homo sapiens Ser/Arg-related nuclear... 34 0.73
U94836-1|AAB53327.1| 884|Homo sapiens ERPROT 213-21 protein. 33 1.7
BC063829-1|AAH63829.1| 1664|Homo sapiens peroxisome proliferator... 33 1.7
BC021294-1|AAH21294.1| 884|Homo sapiens calcium homeostasis end... 33 1.7
BC002561-1|AAH02561.2| 659|Homo sapiens PPRC1 protein protein. 33 1.7
AL500527-6|CAH72219.1| 631|Homo sapiens peroxisome proliferator... 33 1.7
AL500527-5|CAH72218.1| 1664|Homo sapiens peroxisome proliferator... 33 1.7
AK123968-1|BAC85736.1| 132|Homo sapiens protein ( Homo sapiens ... 33 1.7
AF325193-1|AAK11573.1| 1664|Homo sapiens PGC-1 related co-activa... 33 1.7
AB209730-1|BAD92967.1| 399|Homo sapiens calcium homeostasis end... 33 1.7
AB209476-1|BAD92713.1| 1264|Homo sapiens importin 4 variant prot... 33 1.7
AB011167-1|BAA25521.2| 1666|Homo sapiens KIAA0595 protein protein. 33 1.7
BC052604-1|AAH52604.1| 275|Homo sapiens PRR6 protein protein. 32 2.2
BC006350-1|AAH06350.1| 619|Homo sapiens BUD13 homolog (S. cerev... 32 2.2
AL133561-1|CAB63715.1| 580|Homo sapiens hypothetical protein pr... 32 2.2
AF514992-1|AAM76703.1| 271|Homo sapiens nuclear protein p30 pro... 32 2.2
AL607122-4|CAI14973.1| 319|Homo sapiens forkhead box E3 protein. 32 3.0
AF536542-1|AAN77183.1| 916|Homo sapiens SR-related CTD associat... 32 3.0
AF275722-1|AAF82793.1| 319|Homo sapiens forkhead transcription ... 32 3.0
DQ060036-1|AAY43130.1| 900|Homo sapiens polymerase (DNA directe... 31 3.9
AY136549-1|AAN52116.1| 900|Homo sapiens DNA polymerase N protein. 31 3.9
AL158068-2|CAM20461.1| 900|Homo sapiens polymerase (DNA directe... 31 3.9
AL136360-1|CAM16854.1| 900|Homo sapiens polymerase (DNA directe... 31 3.9
BT006631-1|AAP35277.1| 342|Homo sapiens sorting nexin 15 protein. 31 6.8
BC128191-1|AAI28192.1| 183|Homo sapiens PRB4 protein protein. 31 6.8
BC096840-1|AAH96840.1| 445|Homo sapiens histamine receptor H3 p... 31 6.8
BC063316-1|AAH63316.1| 369|Homo sapiens FBXL17 protein protein. 31 6.8
BC014520-1|AAH14520.1| 342|Homo sapiens sorting nexin 15 protein. 31 6.8
BC012767-1|AAH12767.1| 342|Homo sapiens sorting nexin 15 protein. 31 6.8
BC009897-1|AAH09897.1| 342|Homo sapiens sorting nexin 15 protein. 31 6.8
AL078633-1|CAC04014.1| 445|Homo sapiens histamine receptor H3 p... 31 6.8
AK128837-1|BAC87637.1| 286|Homo sapiens protein ( Homo sapiens ... 31 6.8
AJ296652-1|CAC51025.1| 445|Homo sapiens histamine h3 receptor p... 31 6.8
AF321910-1|AAL71911.1| 445|Homo sapiens histamine H3 receptor i... 31 6.8
AF175267-1|AAF89955.1| 342|Homo sapiens sorting nexin 15 protein. 31 6.8
AF140538-1|AAD38151.1| 445|Homo sapiens histamine H3 receptor p... 31 6.8
AB208807-1|BAD92044.1| 248|Homo sapiens D site of albumin promo... 31 6.8
AB045369-1|BAB20090.1| 453|Homo sapiens histamine H3 receptor H... 31 6.8
AB019000-1|BAB17030.1| 453|Homo sapiens G-protein coupled recep... 31 6.8
DQ503576-1|ABF56582.1| 258|Homo sapiens fibroblast growth facto... 30 9.0
BC025966-1|AAH25966.1| 258|Homo sapiens fibroblast growth facto... 30 9.0
AL359198-1|CAH73477.1| 258|Homo sapiens fibroblast growth facto... 30 9.0
AK130129-1|BAC85294.1| 370|Homo sapiens protein. 30 9.0
AK075410-1|BAC11602.1| 258|Homo sapiens protein ( Homo sapiens ... 30 9.0
AK025685-1|BAB15217.1| 287|Homo sapiens protein ( Homo sapiens ... 30 9.0
AB065467-1|BAC05726.1| 1520|Homo sapiens seven transmembrane hel... 30 9.0
>BC037582-1|AAH37582.1| 349|Homo sapiens ATXN7L2 protein protein.
Length = 349
Score = 36.3 bits (80), Expect = 0.14
Identities = 30/98 (30%), Positives = 44/98 (44%), Gaps = 5/98 (5%)
Frame = +3
Query: 6 GSRMVATP*PART-----SRRCDVRSARSRSGRSEDTAPSPSRRRACSPGRHPGTWRRRR 170
GS+ + +P PA T S+ ++++S G+ +PSR+R SPG P T +R
Sbjct: 155 GSQAITSPLPANTPSPSFSKLPPSKASKSSKGKDGVEVEAPSRKRKLSPG--PTTLKRTC 212
Query: 171 SLPITGGVATSALGGKGAPAKV*FERGGSTLGGPCWRR 284
L TG S G A K G + GP +R
Sbjct: 213 ILEPTGKGKPSGCRGLSAKTKTALSMGLNGTMGPRVKR 250
>AL355145-2|CAI22938.1| 349|Homo sapiens ataxin 7-like 2 protein.
Length = 349
Score = 36.3 bits (80), Expect = 0.14
Identities = 30/98 (30%), Positives = 44/98 (44%), Gaps = 5/98 (5%)
Frame = +3
Query: 6 GSRMVATP*PART-----SRRCDVRSARSRSGRSEDTAPSPSRRRACSPGRHPGTWRRRR 170
GS+ + +P PA T S+ ++++S G+ +PSR+R SPG P T +R
Sbjct: 155 GSQAITSPLPANTPSPSFSKLPPSKASKSSKGKDGVEVEAPSRKRKLSPG--PTTLKRTC 212
Query: 171 SLPITGGVATSALGGKGAPAKV*FERGGSTLGGPCWRR 284
L TG S G A K G + GP +R
Sbjct: 213 ILEPTGKGKPSGCRGLSAKTKTALSMGLNGTMGPRVKR 250
>AL355145-1|CAI22937.1| 722|Homo sapiens ataxin 7-like 2 protein.
Length = 722
Score = 36.3 bits (80), Expect = 0.14
Identities = 30/98 (30%), Positives = 44/98 (44%), Gaps = 5/98 (5%)
Frame = +3
Query: 6 GSRMVATP*PART-----SRRCDVRSARSRSGRSEDTAPSPSRRRACSPGRHPGTWRRRR 170
GS+ + +P PA T S+ ++++S G+ +PSR+R SPG P T +R
Sbjct: 528 GSQAITSPLPANTPSPSFSKLPPSKASKSSKGKDGVEVEAPSRKRKLSPG--PTTLKRTC 585
Query: 171 SLPITGGVATSALGGKGAPAKV*FERGGSTLGGPCWRR 284
L TG S G A K G + GP +R
Sbjct: 586 ILEPTGKGKPSGCRGLSAKTKTALSMGLNGTMGPRVKR 623
>BC063806-1|AAH63806.1| 1542|Homo sapiens PPRC1 protein protein.
Length = 1542
Score = 34.3 bits (75), Expect = 0.56
Identities = 19/43 (44%), Positives = 24/43 (55%)
Frame = +3
Query: 45 SRRCDVRSARSRSGRSEDTAPSPSRRRACSPGRHPGTWRRRRS 173
SRRC S+ S S S ++ S SR R+ SP + RRRRS
Sbjct: 1356 SRRCSSSSSSSSSSSSSSSSSSSSRSRSRSPSPRRRSDRRRRS 1398
>BC016681-1|AAH16681.1| 473|Homo sapiens BRSK1 protein protein.
Length = 473
Score = 34.3 bits (75), Expect = 0.56
Identities = 25/87 (28%), Positives = 34/87 (39%)
Frame = +3
Query: 42 TSRRCDVRSARSRSGRSEDTAPSPSRRRACSPGRHPGTWRRRRSLPITGGVATSALGGKG 221
TS+ + S R G + + P PS R PG PG+ R P+ + T G
Sbjct: 167 TSKTQTLPSRGPRGGGAGEQPPPPSARSTPLPGP-PGSPRSSGGTPLHSPLHTPRASPTG 225
Query: 222 APAKV*FERGGSTLGGPCWRRGLAAWR 302
P G +GG WR L + R
Sbjct: 226 TPGTTPPPSPGGGVGGAAWRSRLNSIR 252
>AY505124-1|AAS86442.1| 778|Homo sapiens protein kinase SAD-B
protein.
Length = 778
Score = 34.3 bits (75), Expect = 0.56
Identities = 25/87 (28%), Positives = 34/87 (39%)
Frame = +3
Query: 42 TSRRCDVRSARSRSGRSEDTAPSPSRRRACSPGRHPGTWRRRRSLPITGGVATSALGGKG 221
TS+ + S R G + + P PS R PG PG+ R P+ + T G
Sbjct: 472 TSKTQTLPSRGPRGGGAGEQPPPPSARSTPLPGP-PGSPRSSGGTPLHSPLHTPRASPTG 530
Query: 222 APAKV*FERGGSTLGGPCWRRGLAAWR 302
P G +GG WR L + R
Sbjct: 531 TPGTTPPPSPGGGVGGAAWRSRLNSIR 557
>AY458602-1|AAS10354.1| 778|Homo sapiens SAD1 kinase protein.
Length = 778
Score = 34.3 bits (75), Expect = 0.56
Identities = 25/87 (28%), Positives = 34/87 (39%)
Frame = +3
Query: 42 TSRRCDVRSARSRSGRSEDTAPSPSRRRACSPGRHPGTWRRRRSLPITGGVATSALGGKG 221
TS+ + S R G + + P PS R PG PG+ R P+ + T G
Sbjct: 472 TSKTQTLPSRGPRGGGAGEQPPPPSARSTPLPGP-PGSPRSSGGTPLHSPLHTPRASPTG 530
Query: 222 APAKV*FERGGSTLGGPCWRRGLAAWR 302
P G +GG WR L + R
Sbjct: 531 TPGTTPPPSPGGGVGGAAWRSRLNSIR 557
>AF479827-1|AAL87698.1| 778|Homo sapiens protein kinase-like
protein protein.
Length = 778
Score = 34.3 bits (75), Expect = 0.56
Identities = 25/87 (28%), Positives = 34/87 (39%)
Frame = +3
Query: 42 TSRRCDVRSARSRSGRSEDTAPSPSRRRACSPGRHPGTWRRRRSLPITGGVATSALGGKG 221
TS+ + S R G + + P PS R PG PG+ R P+ + T G
Sbjct: 472 TSKTQTLPSRGPRGGGAGEQPPPPSARSTPLPGP-PGSPRSSGGTPLHSPLHTPRASPTG 530
Query: 222 APAKV*FERGGSTLGGPCWRRGLAAWR 302
P G +GG WR L + R
Sbjct: 531 TPGTTPPPSPGGGVGGAAWRSRLNSIR 557
>AF479826-1|AAL87697.1| 794|Homo sapiens putative serine/threonine
protein kinase protein.
Length = 794
Score = 34.3 bits (75), Expect = 0.56
Identities = 25/87 (28%), Positives = 34/87 (39%)
Frame = +3
Query: 42 TSRRCDVRSARSRSGRSEDTAPSPSRRRACSPGRHPGTWRRRRSLPITGGVATSALGGKG 221
TS+ + S R G + + P PS R PG PG+ R P+ + T G
Sbjct: 488 TSKTQTLPSRGPRGGGAGEQPPPPSARSTPLPGP-PGSPRSSGGTPLHSPLHTPRASPTG 546
Query: 222 APAKV*FERGGSTLGGPCWRRGLAAWR 302
P G +GG WR L + R
Sbjct: 547 TPGTTPPPSPGGGVGGAAWRSRLNSIR 573
>AB058714-1|BAB47440.1| 715|Homo sapiens KIAA1811 protein protein.
Length = 715
Score = 34.3 bits (75), Expect = 0.56
Identities = 25/87 (28%), Positives = 34/87 (39%)
Frame = +3
Query: 42 TSRRCDVRSARSRSGRSEDTAPSPSRRRACSPGRHPGTWRRRRSLPITGGVATSALGGKG 221
TS+ + S R G + + P PS R PG PG+ R P+ + T G
Sbjct: 409 TSKTQTLPSRGPRGGGAGEQPPPPSARSTPLPGP-PGSPRSSGGTPLHSPLHTPRASPTG 467
Query: 222 APAKV*FERGGSTLGGPCWRRGLAAWR 302
P G +GG WR L + R
Sbjct: 468 TPGTTPPPSPGGGVGGAAWRSRLNSIR 494
>BC036187-1|AAH36187.1| 904|Homo sapiens serine/arginine repetitive
matrix 1 protein.
Length = 904
Score = 33.9 bits (74), Expect = 0.73
Identities = 29/84 (34%), Positives = 34/84 (40%), Gaps = 2/84 (2%)
Frame = -3
Query: 430 RPKHPWPVNICVSRKVRHPRSRPTQSARTGRTASTVXEAGRRVRQAARP--RLQHGPPRV 257
RPK N V R+ RH SR + R T GRR R + P R + P
Sbjct: 506 RPKRSHVKNGEVGRRRRHSPSRSASPSPRKRQKET-SPRGRRRRSPSPPPTRRRRSPSPA 564
Query: 256 EPPRSNYTFAGAPFPPRAEVATPP 185
PPR T P PPR +PP
Sbjct: 565 PPPRRRRT--PTP-PPRRRTPSPP 585
>AL445686-4|CAI14682.1| 904|Homo sapiens serine/arginine repetitive
matrix 1 protein.
Length = 904
Score = 33.9 bits (74), Expect = 0.73
Identities = 29/84 (34%), Positives = 34/84 (40%), Gaps = 2/84 (2%)
Frame = -3
Query: 430 RPKHPWPVNICVSRKVRHPRSRPTQSARTGRTASTVXEAGRRVRQAARP--RLQHGPPRV 257
RPK N V R+ RH SR + R T GRR R + P R + P
Sbjct: 506 RPKRSHVKNGEVGRRRRHSPSRSASPSPRKRQKET-SPRGRRRRSPSPPPTRRRRSPSPA 564
Query: 256 EPPRSNYTFAGAPFPPRAEVATPP 185
PPR T P PPR +PP
Sbjct: 565 PPPRRRRT--PTP-PPRRRTPSPP 585
>AL445648-3|CAH73090.1| 904|Homo sapiens serine/arginine repetitive
matrix 1 protein.
Length = 904
Score = 33.9 bits (74), Expect = 0.73
Identities = 29/84 (34%), Positives = 34/84 (40%), Gaps = 2/84 (2%)
Frame = -3
Query: 430 RPKHPWPVNICVSRKVRHPRSRPTQSARTGRTASTVXEAGRRVRQAARP--RLQHGPPRV 257
RPK N V R+ RH SR + R T GRR R + P R + P
Sbjct: 506 RPKRSHVKNGEVGRRRRHSPSRSASPSPRKRQKET-SPRGRRRRSPSPPPTRRRRSPSPA 564
Query: 256 EPPRSNYTFAGAPFPPRAEVATPP 185
PPR T P PPR +PP
Sbjct: 565 PPPRRRRT--PTP-PPRRRTPSPP 585
>AF419855-1|AAP97290.1| 820|Homo sapiens Ser/Arg-related nuclear
matrix protein protein.
Length = 820
Score = 33.9 bits (74), Expect = 0.73
Identities = 29/84 (34%), Positives = 34/84 (40%), Gaps = 2/84 (2%)
Frame = -3
Query: 430 RPKHPWPVNICVSRKVRHPRSRPTQSARTGRTASTVXEAGRRVRQAARP--RLQHGPPRV 257
RPK N V R+ RH SR + R T GRR R + P R + P
Sbjct: 504 RPKRSHVKNGEVGRRRRHSPSRSASPSPRKRQKET-SPRGRRRRSPSPPPTRRRRSPSPA 562
Query: 256 EPPRSNYTFAGAPFPPRAEVATPP 185
PPR T P PPR +PP
Sbjct: 563 PPPRRRRT--PTP-PPRRRTPSPP 583
>AF048977-1|AAC09321.1| 820|Homo sapiens Ser/Arg-related nuclear
matrix protein protein.
Length = 820
Score = 33.9 bits (74), Expect = 0.73
Identities = 29/84 (34%), Positives = 34/84 (40%), Gaps = 2/84 (2%)
Frame = -3
Query: 430 RPKHPWPVNICVSRKVRHPRSRPTQSARTGRTASTVXEAGRRVRQAARP--RLQHGPPRV 257
RPK N V R+ RH SR + R T GRR R + P R + P
Sbjct: 504 RPKRSHVKNGEVGRRRRHSPSRSASPSPRKRQKET-SPRGRRRRSPSPPPTRRRRSPSPA 562
Query: 256 EPPRSNYTFAGAPFPPRAEVATPP 185
PPR T P PPR +PP
Sbjct: 563 PPPRRRRT--PTP-PPRRRTPSPP 583
>U94836-1|AAB53327.1| 884|Homo sapiens ERPROT 213-21 protein.
Length = 884
Score = 32.7 bits (71), Expect = 1.7
Identities = 20/58 (34%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Frame = +3
Query: 36 ARTSRRCDVRS-ARSRSGRSEDTAPSPSRRRACSPGRHPGTWRRRRSLPITGGVATSA 206
+R+ R RS +RSRS RS + S SR ++ SPGR + R + P + G+ +++
Sbjct: 741 SRSYSRSRSRSRSRSRSSRSRSRSQSRSRSKSYSPGRRRRSRSRSPTPPSSAGLGSNS 798
>BC063829-1|AAH63829.1| 1664|Homo sapiens peroxisome
proliferator-activated receptor gamma,
coactivator-related 1 protein.
Length = 1664
Score = 32.7 bits (71), Expect = 1.7
Identities = 18/42 (42%), Positives = 23/42 (54%)
Frame = +3
Query: 45 SRRCDVRSARSRSGRSEDTAPSPSRRRACSPGRHPGTWRRRR 170
SRRC S+ S S S ++ S SR R+ SP + RRRR
Sbjct: 1476 SRRCSSSSSSSSSSSSSSSSSSSSRSRSRSPSPRRRSDRRRR 1517
>BC021294-1|AAH21294.1| 884|Homo sapiens calcium homeostasis
endoplasmic reticulum protein protein.
Length = 884
Score = 32.7 bits (71), Expect = 1.7
Identities = 20/58 (34%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Frame = +3
Query: 36 ARTSRRCDVRS-ARSRSGRSEDTAPSPSRRRACSPGRHPGTWRRRRSLPITGGVATSA 206
+R+ R RS +RSRS RS + S SR ++ SPGR + R + P + G+ +++
Sbjct: 741 SRSYSRSRSRSRSRSRSSRSRSRSQSRSRSKSYSPGRRRRSRSRSPTPPSSAGLGSNS 798
>BC002561-1|AAH02561.2| 659|Homo sapiens PPRC1 protein protein.
Length = 659
Score = 32.7 bits (71), Expect = 1.7
Identities = 18/42 (42%), Positives = 23/42 (54%)
Frame = +3
Query: 45 SRRCDVRSARSRSGRSEDTAPSPSRRRACSPGRHPGTWRRRR 170
SRRC S+ S S S ++ S SR R+ SP + RRRR
Sbjct: 481 SRRCSSSSSSSSSSSSSSSSSSSSRSRSRSPSPRRRSDRRRR 522
>AL500527-6|CAH72219.1| 631|Homo sapiens peroxisome
proliferator-activated receptor gamma,pus laevis)
protein.
Length = 631
Score = 32.7 bits (71), Expect = 1.7
Identities = 18/42 (42%), Positives = 23/42 (54%)
Frame = +3
Query: 45 SRRCDVRSARSRSGRSEDTAPSPSRRRACSPGRHPGTWRRRR 170
SRRC S+ S S S ++ S SR R+ SP + RRRR
Sbjct: 443 SRRCSSSSSSSSSSSSSSSSSSSSRSRSRSPSPRRRSDRRRR 484
>AL500527-5|CAH72218.1| 1664|Homo sapiens peroxisome
proliferator-activated receptor gamma,pus laevis)
protein.
Length = 1664
Score = 32.7 bits (71), Expect = 1.7
Identities = 18/42 (42%), Positives = 23/42 (54%)
Frame = +3
Query: 45 SRRCDVRSARSRSGRSEDTAPSPSRRRACSPGRHPGTWRRRR 170
SRRC S+ S S S ++ S SR R+ SP + RRRR
Sbjct: 1476 SRRCSSSSSSSSSSSSSSSSSSSSRSRSRSPSPRRRSDRRRR 1517
>AK123968-1|BAC85736.1| 132|Homo sapiens protein ( Homo sapiens
cDNA FLJ41974 fis, clone SKNMC2005772. ).
Length = 132
Score = 32.7 bits (71), Expect = 1.7
Identities = 17/44 (38%), Positives = 25/44 (56%), Gaps = 4/44 (9%)
Frame = +3
Query: 180 ITGGVATSALGGKGAPAKV*FERG---GSTLGGPCWR-RGLAAW 299
+TG + A G+ P++ F+RG STL G CW+ R A+W
Sbjct: 75 VTGPACSIAWAGRSPPSRWIFQRGLTATSTLPGSCWKGRSSASW 118
>AF325193-1|AAK11573.1| 1664|Homo sapiens PGC-1 related co-activator
protein.
Length = 1664
Score = 32.7 bits (71), Expect = 1.7
Identities = 18/42 (42%), Positives = 23/42 (54%)
Frame = +3
Query: 45 SRRCDVRSARSRSGRSEDTAPSPSRRRACSPGRHPGTWRRRR 170
SRRC S+ S S S ++ S SR R+ SP + RRRR
Sbjct: 1476 SRRCSSSSSSSSSSSSSSSSSSSSRSRSRSPSPRRRSDRRRR 1517
>AB209730-1|BAD92967.1| 399|Homo sapiens calcium homeostasis
endoplasmic reticulum protein variant protein.
Length = 399
Score = 32.7 bits (71), Expect = 1.7
Identities = 20/58 (34%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Frame = +3
Query: 36 ARTSRRCDVRS-ARSRSGRSEDTAPSPSRRRACSPGRHPGTWRRRRSLPITGGVATSA 206
+R+ R RS +RSRS RS + S SR ++ SPGR + R + P + G+ +++
Sbjct: 256 SRSYSRSRSRSRSRSRSSRSRSRSQSRSRSKSYSPGRRRRSRSRSPTPPSSAGLGSNS 313
>AB209476-1|BAD92713.1| 1264|Homo sapiens importin 4 variant
protein.
Length = 1264
Score = 32.7 bits (71), Expect = 1.7
Identities = 31/93 (33%), Positives = 38/93 (40%), Gaps = 7/93 (7%)
Frame = -3
Query: 448 AILKRYRP--KHPWPVNICVSRKVRHPRSRPTQSARTGRTASTVXEAGRRVRQAARPRLQ 275
A+L R R K WP+N S S PTQ + R T+ E+G R A+P
Sbjct: 78 ALLLRARSFIKPSWPLNARSS-------SSPTQLGNSRRGEPTLPESGFRDSAGAQPNGS 130
Query: 274 HGP-----PRVEPPRSNYTFAGAPFPPRAEVAT 191
G R+E P A PFPP V T
Sbjct: 131 GGAGPLCGKRIESPWQPAGRAATPFPPEVGVRT 163
>AB011167-1|BAA25521.2| 1666|Homo sapiens KIAA0595 protein protein.
Length = 1666
Score = 32.7 bits (71), Expect = 1.7
Identities = 18/42 (42%), Positives = 23/42 (54%)
Frame = +3
Query: 45 SRRCDVRSARSRSGRSEDTAPSPSRRRACSPGRHPGTWRRRR 170
SRRC S+ S S S ++ S SR R+ SP + RRRR
Sbjct: 1478 SRRCSSSSSSSSSSSSSSSSSSSSRSRSRSPSPRRRSDRRRR 1519
>BC052604-1|AAH52604.1| 275|Homo sapiens PRR6 protein protein.
Length = 275
Score = 32.3 bits (70), Expect = 2.2
Identities = 27/94 (28%), Positives = 39/94 (41%), Gaps = 9/94 (9%)
Frame = -3
Query: 355 SARTGRTASTVXEAGRRVRQ--AARPRLQHGPPRV------EPPRSNYTFAGAPFPPRAE 200
+ RT R+AS + V + + +PRL+ PR EPP P PP
Sbjct: 39 ATRTRRSASQAGSKSQAVEKPPSEKPRLRRSSPRAQEEGPGEPPPPELALLPPPPPPPPT 98
Query: 199 VATPPVIGSER-LRLQVPGWRPGEQARRLEGDGA 101
ATP S L Q W ++ ++L +GA
Sbjct: 99 PATPTSSASNLDLGEQRERWETFQKRQKLTSEGA 132
>BC006350-1|AAH06350.1| 619|Homo sapiens BUD13 homolog (S.
cerevisiae) protein.
Length = 619
Score = 32.3 bits (70), Expect = 2.2
Identities = 31/116 (26%), Positives = 44/116 (37%), Gaps = 2/116 (1%)
Frame = -3
Query: 391 RKVRHPRSRPT-QSARTGRTASTVXEAGRRVRQAARPR-LQHGPPRVEPPRSNYTFAGAP 218
RK RH P+ + AR + R + PR ++H PPR + P
Sbjct: 141 RKDRHDTPDPSPRRARHDTPDPSPLRGARHDSDTSPPRRIRHDSSDTSPPRRARHDSPDP 200
Query: 217 FPPRAEVATPPVIGSERLRLQVPGWRPGEQARRLEGDGAVSSDRPDRDRALRTSQR 50
PPR R+R P P +AR G +SS R + + TS+R
Sbjct: 201 SPPRRPQHNSSGASPRRVRHDSPDPSPPRRAR--HGSSDISSPRRVHNNSPDTSRR 254
>AL133561-1|CAB63715.1| 580|Homo sapiens hypothetical protein
protein.
Length = 580
Score = 32.3 bits (70), Expect = 2.2
Identities = 22/65 (33%), Positives = 30/65 (46%), Gaps = 1/65 (1%)
Frame = -3
Query: 376 PRSRPTQSA-RTGRTASTVXEAGRRVRQAARPRLQHGPPRVEPPRSNYTFAGAPFPPRAE 200
PR+ PT+ R T + E+ R +A+ R+ PPR P R + PPRA
Sbjct: 216 PRASPTRRPPRASPTRTPPRESLRTSHRASPTRM---PPRASPTRRPPRASPTGSPPRAS 272
Query: 199 VATPP 185
TPP
Sbjct: 273 PMTPP 277
>AF514992-1|AAM76703.1| 271|Homo sapiens nuclear protein p30
protein.
Length = 271
Score = 32.3 bits (70), Expect = 2.2
Identities = 27/94 (28%), Positives = 39/94 (41%), Gaps = 9/94 (9%)
Frame = -3
Query: 355 SARTGRTASTVXEAGRRVRQ--AARPRLQHGPPRV------EPPRSNYTFAGAPFPPRAE 200
+ RT R+AS + V + + +PRL+ PR EPP P PP
Sbjct: 35 ATRTRRSASQAGSKSQAVEKPPSEKPRLRRSSPRAQEEGPGEPPPPELALLPPPPPPPPT 94
Query: 199 VATPPVIGSER-LRLQVPGWRPGEQARRLEGDGA 101
ATP S L Q W ++ ++L +GA
Sbjct: 95 PATPTSSASNLDLGEQRERWETFQKRQKLTSEGA 128
>AL607122-4|CAI14973.1| 319|Homo sapiens forkhead box E3 protein.
Length = 319
Score = 31.9 bits (69), Expect = 3.0
Identities = 15/32 (46%), Positives = 18/32 (56%)
Frame = -3
Query: 229 AGAPFPPRAEVATPPVIGSERLRLQVPGWRPG 134
A A FPP A A+PP+ RL +P RPG
Sbjct: 246 AAAAFPPCAAAASPPLYSQVPDRLVLPATRPG 277
>AF536542-1|AAN77183.1| 916|Homo sapiens SR-related CTD associated
factor 6 protein.
Length = 916
Score = 31.9 bits (69), Expect = 3.0
Identities = 16/46 (34%), Positives = 27/46 (58%)
Frame = +3
Query: 69 ARSRSGRSEDTAPSPSRRRACSPGRHPGTWRRRRSLPITGGVATSA 206
+RSRS RS + S SR ++ SPGR + R + P + G+ +++
Sbjct: 785 SRSRSSRSRSRSQSRSRSKSYSPGRRRRSRSRSPTPPSSAGLGSNS 830
>AF275722-1|AAF82793.1| 319|Homo sapiens forkhead transcription
factor protein.
Length = 319
Score = 31.9 bits (69), Expect = 3.0
Identities = 15/32 (46%), Positives = 18/32 (56%)
Frame = -3
Query: 229 AGAPFPPRAEVATPPVIGSERLRLQVPGWRPG 134
A A FPP A A+PP+ RL +P RPG
Sbjct: 246 AAAAFPPCAAAASPPLYSQVPDRLVLPATRPG 277
>DQ060036-1|AAY43130.1| 900|Homo sapiens polymerase (DNA directed)
nu protein.
Length = 900
Score = 31.5 bits (68), Expect = 3.9
Identities = 27/100 (27%), Positives = 35/100 (35%), Gaps = 7/100 (7%)
Frame = +3
Query: 372 RGCLTFRLTQMLTGHGC-----FGRYLFKIAGREPTA--QCHHCADRDEEDTAEHTLARC 530
RG + Q GHGC G L +P Q H A D+E A AR
Sbjct: 245 RGIVVLVKRQAEGGHGCPDAPACGPVLEGFVSDDPCIYIQIEHSAIWDQEQEAHQQFARN 304
Query: 531 SGFDEQRAALVAVIGEELSLPRVVATMLGSDASXKAMLDF 650
F + + R+V G+D S K + DF
Sbjct: 305 VLFQTMKCKCPVICFNAKDFVRIVLQFFGNDGSWKHVADF 344
>AY136549-1|AAN52116.1| 900|Homo sapiens DNA polymerase N protein.
Length = 900
Score = 31.5 bits (68), Expect = 3.9
Identities = 27/100 (27%), Positives = 35/100 (35%), Gaps = 7/100 (7%)
Frame = +3
Query: 372 RGCLTFRLTQMLTGHGC-----FGRYLFKIAGREPTA--QCHHCADRDEEDTAEHTLARC 530
RG + Q GHGC G L +P Q H A D+E A AR
Sbjct: 245 RGIVVLVKRQAEGGHGCPDAPACGPVLEGFVSDDPCIYIQIEHSAIWDQEQEAHQQFARN 304
Query: 531 SGFDEQRAALVAVIGEELSLPRVVATMLGSDASXKAMLDF 650
F + + R+V G+D S K + DF
Sbjct: 305 VLFQTMKCKCPVICFNAKDFVRIVLQFFGNDGSWKHVADF 344
>AL158068-2|CAM20461.1| 900|Homo sapiens polymerase (DNA directed)
nu protein.
Length = 900
Score = 31.5 bits (68), Expect = 3.9
Identities = 27/100 (27%), Positives = 35/100 (35%), Gaps = 7/100 (7%)
Frame = +3
Query: 372 RGCLTFRLTQMLTGHGC-----FGRYLFKIAGREPTA--QCHHCADRDEEDTAEHTLARC 530
RG + Q GHGC G L +P Q H A D+E A AR
Sbjct: 245 RGIVVLVKRQAEGGHGCPDAPACGPVLEGFVSDDPCIYIQIEHSAIWDQEQEAHQQFARN 304
Query: 531 SGFDEQRAALVAVIGEELSLPRVVATMLGSDASXKAMLDF 650
F + + R+V G+D S K + DF
Sbjct: 305 VLFQTMKCKCPVICFNAKDFVRIVLQFFGNDGSWKHVADF 344
>AL136360-1|CAM16854.1| 900|Homo sapiens polymerase (DNA directed)
nu protein.
Length = 900
Score = 31.5 bits (68), Expect = 3.9
Identities = 27/100 (27%), Positives = 35/100 (35%), Gaps = 7/100 (7%)
Frame = +3
Query: 372 RGCLTFRLTQMLTGHGC-----FGRYLFKIAGREPTA--QCHHCADRDEEDTAEHTLARC 530
RG + Q GHGC G L +P Q H A D+E A AR
Sbjct: 245 RGIVVLVKRQAEGGHGCPDAPACGPVLEGFVSDDPCIYIQIEHSAIWDQEQEAHQQFARN 304
Query: 531 SGFDEQRAALVAVIGEELSLPRVVATMLGSDASXKAMLDF 650
F + + R+V G+D S K + DF
Sbjct: 305 VLFQTMKCKCPVICFNAKDFVRIVLQFFGNDGSWKHVADF 344
>BT006631-1|AAP35277.1| 342|Homo sapiens sorting nexin 15 protein.
Length = 342
Score = 30.7 bits (66), Expect = 6.8
Identities = 24/72 (33%), Positives = 31/72 (43%), Gaps = 1/72 (1%)
Frame = -3
Query: 223 APFPPR-AEVATPPVIGSERLRLQVPGWRPGEQARRLEGDGAVSSDRPDRDRALRTSQRR 47
AP P AE+AT V E RL W PG Q +G+G + + L T R
Sbjct: 225 APSPTHVAELATMEV---ESARLDQEPWEPGGQEEEEDGEGGPTPAYLSQATELITQALR 281
Query: 46 DVLAGQGVATIR 11
D AG A ++
Sbjct: 282 DEKAGAYAAALQ 293
>BC128191-1|AAI28192.1| 183|Homo sapiens PRB4 protein protein.
Length = 183
Score = 30.7 bits (66), Expect = 6.8
Identities = 22/72 (30%), Positives = 28/72 (38%)
Frame = -3
Query: 298 QAARPRLQHGPPRVEPPRSNYTFAGAPFPPRAEVATPPVIGSERLRLQVPGWRPGEQARR 119
Q RP G P+ PP+ G P PP PP G++ Q P PG+ R
Sbjct: 46 QPQRPPPPPGKPQGPPPQGGNQSQGPPPPPGKPEGRPPQGGNQS---QGPPPHPGKPERP 102
Query: 118 LEGDGAVSSDRP 83
G S +P
Sbjct: 103 PPQGGNQSQGKP 114
>BC096840-1|AAH96840.1| 445|Homo sapiens histamine receptor H3
protein.
Length = 445
Score = 30.7 bits (66), Expect = 6.8
Identities = 26/93 (27%), Positives = 37/93 (39%), Gaps = 7/93 (7%)
Frame = +3
Query: 63 RSARSR-SGRSEDTAPSPSRRRACSPGRHPGTWR-----RRRSLPITG-GVATSALGGKG 221
R R R G E P P SP PG W ++P+ GV +A+G +
Sbjct: 227 RRTRLRLDGAREAAGPEPPPEAQPSPPPPPGCWGCWQKGHGEAMPLHRYGVGEAAVGAEA 286
Query: 222 APAKV*FERGGSTLGGPCWRRGLAAWRTRRPAS 320
A + GG ++ P G ++ T RP S
Sbjct: 287 GEATLGGGGGGGSVASPTSSSGSSSRGTERPRS 319
>BC063316-1|AAH63316.1| 369|Homo sapiens FBXL17 protein protein.
Length = 369
Score = 30.7 bits (66), Expect = 6.8
Identities = 20/51 (39%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Frame = -3
Query: 271 GPPR-VEPPRSNYTFAGAPFPPRAEVATPPVIGSERLRLQVPGWRPGEQAR 122
GP R + PP + F G P P AE+ TPP + +R VP P +Q R
Sbjct: 165 GPVRFLGPPAAVQLFRG-PTPSPAELPTPPEMVCKRKGAGVPACTPCKQPR 214
>BC014520-1|AAH14520.1| 342|Homo sapiens sorting nexin 15 protein.
Length = 342
Score = 30.7 bits (66), Expect = 6.8
Identities = 24/72 (33%), Positives = 31/72 (43%), Gaps = 1/72 (1%)
Frame = -3
Query: 223 APFPPR-AEVATPPVIGSERLRLQVPGWRPGEQARRLEGDGAVSSDRPDRDRALRTSQRR 47
AP P AE+AT V E RL W PG Q +G+G + + L T R
Sbjct: 225 APSPTHVAELATMEV---ESARLDQEPWEPGGQEEEEDGEGGPTPAYLSQATELITQALR 281
Query: 46 DVLAGQGVATIR 11
D AG A ++
Sbjct: 282 DEKAGAYAAALQ 293
>BC012767-1|AAH12767.1| 342|Homo sapiens sorting nexin 15 protein.
Length = 342
Score = 30.7 bits (66), Expect = 6.8
Identities = 24/72 (33%), Positives = 31/72 (43%), Gaps = 1/72 (1%)
Frame = -3
Query: 223 APFPPR-AEVATPPVIGSERLRLQVPGWRPGEQARRLEGDGAVSSDRPDRDRALRTSQRR 47
AP P AE+AT V E RL W PG Q +G+G + + L T R
Sbjct: 225 APSPTHVAELATMEV---ESARLDQEPWEPGGQEEEEDGEGGPTPAYLSQATELITQALR 281
Query: 46 DVLAGQGVATIR 11
D AG A ++
Sbjct: 282 DEKAGAYAAALQ 293
>BC009897-1|AAH09897.1| 342|Homo sapiens sorting nexin 15 protein.
Length = 342
Score = 30.7 bits (66), Expect = 6.8
Identities = 24/72 (33%), Positives = 31/72 (43%), Gaps = 1/72 (1%)
Frame = -3
Query: 223 APFPPR-AEVATPPVIGSERLRLQVPGWRPGEQARRLEGDGAVSSDRPDRDRALRTSQRR 47
AP P AE+AT V E RL W PG Q +G+G + + L T R
Sbjct: 225 APSPTHVAELATMEV---ESARLDQEPWEPGGQEEEEDGEGGPTPAYLSQATELITQALR 281
Query: 46 DVLAGQGVATIR 11
D AG A ++
Sbjct: 282 DEKAGAYAAALQ 293
>AL078633-1|CAC04014.1| 445|Homo sapiens histamine receptor H3
protein.
Length = 445
Score = 30.7 bits (66), Expect = 6.8
Identities = 26/93 (27%), Positives = 37/93 (39%), Gaps = 7/93 (7%)
Frame = +3
Query: 63 RSARSR-SGRSEDTAPSPSRRRACSPGRHPGTWR-----RRRSLPITG-GVATSALGGKG 221
R R R G E P P SP PG W ++P+ GV +A+G +
Sbjct: 227 RRTRLRLDGAREAAGPEPPPEAQPSPPPPPGCWGCWQKGHGEAMPLHRYGVGEAAVGAEA 286
Query: 222 APAKV*FERGGSTLGGPCWRRGLAAWRTRRPAS 320
A + GG ++ P G ++ T RP S
Sbjct: 287 GEATLGGGGGGGSVASPTSSSGSSSRGTERPRS 319
>AK128837-1|BAC87637.1| 286|Homo sapiens protein ( Homo sapiens
cDNA FLJ46366 fis, clone TESTI4051388. ).
Length = 286
Score = 30.7 bits (66), Expect = 6.8
Identities = 24/72 (33%), Positives = 32/72 (44%), Gaps = 2/72 (2%)
Frame = -3
Query: 394 SRKVRHPRSRPTQSA-RTGRTASTVXEAGRRVRQAARPRLQHGPPRVEPPRSNYTFAGAP 218
S K PR+ P ++ R T + + +R A P PPR P R+ T + A
Sbjct: 170 SPKRTPPRASPRRTPPRASPTRAPPRASPKRTPPTASPT--RTPPRASPTRTPPTESPAR 227
Query: 217 FPPRAE-VATPP 185
PPRA TPP
Sbjct: 228 TPPRASPTRTPP 239
>AJ296652-1|CAC51025.1| 445|Homo sapiens histamine h3 receptor
protein.
Length = 445
Score = 30.7 bits (66), Expect = 6.8
Identities = 26/93 (27%), Positives = 37/93 (39%), Gaps = 7/93 (7%)
Frame = +3
Query: 63 RSARSR-SGRSEDTAPSPSRRRACSPGRHPGTWR-----RRRSLPITG-GVATSALGGKG 221
R R R G E P P SP PG W ++P+ GV +A+G +
Sbjct: 227 RRTRLRLDGAREAAGPEPPPEAQPSPPPPPGCWGCWQKGHGEAMPLHRYGVGEAAVGAEA 286
Query: 222 APAKV*FERGGSTLGGPCWRRGLAAWRTRRPAS 320
A + GG ++ P G ++ T RP S
Sbjct: 287 GEATLGGGGGGGSVASPTSSSGSSSRGTERPRS 319
>AF321910-1|AAL71911.1| 445|Homo sapiens histamine H3 receptor
isoform 1 protein.
Length = 445
Score = 30.7 bits (66), Expect = 6.8
Identities = 26/93 (27%), Positives = 37/93 (39%), Gaps = 7/93 (7%)
Frame = +3
Query: 63 RSARSR-SGRSEDTAPSPSRRRACSPGRHPGTWR-----RRRSLPITG-GVATSALGGKG 221
R R R G E P P SP PG W ++P+ GV +A+G +
Sbjct: 227 RRTRLRLDGAREAAGPEPPPEAQPSPPPPPGCWGCWQKGHGEAMPLHRYGVGEAAVGAEA 286
Query: 222 APAKV*FERGGSTLGGPCWRRGLAAWRTRRPAS 320
A + GG ++ P G ++ T RP S
Sbjct: 287 GEATLGGGGGGGSVASPTSSSGSSSRGTERPRS 319
>AF175267-1|AAF89955.1| 342|Homo sapiens sorting nexin 15 protein.
Length = 342
Score = 30.7 bits (66), Expect = 6.8
Identities = 24/72 (33%), Positives = 31/72 (43%), Gaps = 1/72 (1%)
Frame = -3
Query: 223 APFPPR-AEVATPPVIGSERLRLQVPGWRPGEQARRLEGDGAVSSDRPDRDRALRTSQRR 47
AP P AE+AT V E RL W PG Q +G+G + + L T R
Sbjct: 225 APSPTHVAELATMEV---ESARLDQEPWEPGGQEEEEDGEGGPTPAYLSQATELITQALR 281
Query: 46 DVLAGQGVATIR 11
D AG A ++
Sbjct: 282 DEKAGAYAAALQ 293
>AF140538-1|AAD38151.1| 445|Homo sapiens histamine H3 receptor
protein.
Length = 445
Score = 30.7 bits (66), Expect = 6.8
Identities = 26/93 (27%), Positives = 37/93 (39%), Gaps = 7/93 (7%)
Frame = +3
Query: 63 RSARSR-SGRSEDTAPSPSRRRACSPGRHPGTWR-----RRRSLPITG-GVATSALGGKG 221
R R R G E P P SP PG W ++P+ GV +A+G +
Sbjct: 227 RRTRLRLDGAREAAGPEPPPEAQPSPPPPPGCWGCWQKGHGEAMPLHRYGVGEAAVGAEA 286
Query: 222 APAKV*FERGGSTLGGPCWRRGLAAWRTRRPAS 320
A + GG ++ P G ++ T RP S
Sbjct: 287 GEATLGGGGGGGSVASPTSSSGSSSRGTERPRS 319
>AB208807-1|BAD92044.1| 248|Homo sapiens D site of albumin promoter
(albumin D-box) binding protein variant protein.
Length = 248
Score = 30.7 bits (66), Expect = 6.8
Identities = 29/93 (31%), Positives = 37/93 (39%)
Frame = +3
Query: 87 RSEDTAPSPSRRRACSPGRHPGTWRRRRSLPITGGVATSALGGKGAPAKV*FERGGSTLG 266
R+ +P P + SP PG R +L G A G G +V RG + G
Sbjct: 156 RTPAPSPGPGSCGSASPRSSPGHAPARAALGTASGHRAGAAKGAG---RVLTGRGLDSGG 212
Query: 267 GPCWRRGLAAWRTRRPASXTVEAVRPVLADWVG 365
G R GL W AS +V + R V W G
Sbjct: 213 GAVRRWGLGPW-DLAAASNSVSSCREV--SWEG 242
>AB045369-1|BAB20090.1| 453|Homo sapiens histamine H3 receptor HH3R
protein.
Length = 453
Score = 30.7 bits (66), Expect = 6.8
Identities = 26/93 (27%), Positives = 37/93 (39%), Gaps = 7/93 (7%)
Frame = +3
Query: 63 RSARSR-SGRSEDTAPSPSRRRACSPGRHPGTWR-----RRRSLPITG-GVATSALGGKG 221
R R R G E P P SP PG W ++P+ GV +A+G +
Sbjct: 227 RRTRLRLDGAREAAGPEPPPEAQPSPPPPPGCWGCWQKGHGEAMPLHRYGVGEAAVGAEA 286
Query: 222 APAKV*FERGGSTLGGPCWRRGLAAWRTRRPAS 320
A + GG ++ P G ++ T RP S
Sbjct: 287 GEATLGGGGGGGSVASPTSSSGSSSRGTERPRS 319
>AB019000-1|BAB17030.1| 453|Homo sapiens G-protein coupled receptor
protein.
Length = 453
Score = 30.7 bits (66), Expect = 6.8
Identities = 26/93 (27%), Positives = 37/93 (39%), Gaps = 7/93 (7%)
Frame = +3
Query: 63 RSARSR-SGRSEDTAPSPSRRRACSPGRHPGTWR-----RRRSLPITG-GVATSALGGKG 221
R R R G E P P SP PG W ++P+ GV +A+G +
Sbjct: 227 RRTRLRLDGAREAAGPEPPPEAQPSPPPPPGCWGCWQKGHGEAMPLHRYGVGEAAVGAEA 286
Query: 222 APAKV*FERGGSTLGGPCWRRGLAAWRTRRPAS 320
A + GG ++ P G ++ T RP S
Sbjct: 287 GEATLGGGGGGGSVASPTSSSGSSSRGTERPRS 319
>DQ503576-1|ABF56582.1| 258|Homo sapiens fibroblast growth factor
binding protein 3 protein.
Length = 258
Score = 30.3 bits (65), Expect = 9.0
Identities = 14/46 (30%), Positives = 21/46 (45%)
Frame = -3
Query: 376 PRSRPTQSARTGRTASTVXEAGRRVRQAARPRLQHGPPRVEPPRSN 239
P +RPT + G + GR +A+ P PP+ PP+ N
Sbjct: 153 PPARPTVAGFAGESKPRARNRGRTRERASGPAAGTPPPQSAPPKEN 198
>BC025966-1|AAH25966.1| 258|Homo sapiens fibroblast growth factor
binding protein 3 protein.
Length = 258
Score = 30.3 bits (65), Expect = 9.0
Identities = 14/46 (30%), Positives = 21/46 (45%)
Frame = -3
Query: 376 PRSRPTQSARTGRTASTVXEAGRRVRQAARPRLQHGPPRVEPPRSN 239
P +RPT + G + GR +A+ P PP+ PP+ N
Sbjct: 153 PPARPTVAGFAGESKPRARNRGRTRERASGPAAGTPPPQSAPPKEN 198
>AL359198-1|CAH73477.1| 258|Homo sapiens fibroblast growth factor
binding protein 3 protein.
Length = 258
Score = 30.3 bits (65), Expect = 9.0
Identities = 14/46 (30%), Positives = 21/46 (45%)
Frame = -3
Query: 376 PRSRPTQSARTGRTASTVXEAGRRVRQAARPRLQHGPPRVEPPRSN 239
P +RPT + G + GR +A+ P PP+ PP+ N
Sbjct: 153 PPARPTVAGFAGESKPRARNRGRTRERASGPAAGTPPPQSAPPKEN 198
>AK130129-1|BAC85294.1| 370|Homo sapiens protein.
Length = 370
Score = 30.3 bits (65), Expect = 9.0
Identities = 20/45 (44%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Frame = +3
Query: 72 RSRSGRSEDTAPSPSRRRACSPGRHPGTWRRRR-SLPITGGVATS 203
R R+ + T P RRRA +P R PG RRRR S P G+ S
Sbjct: 286 RRRTASAPRTPGVPRRRRASAP-RTPGVPRRRRASAPWVPGIPPS 329
>AK075410-1|BAC11602.1| 258|Homo sapiens protein ( Homo sapiens
cDNA PSEC0101 fis, clone NT2RP2003115. ).
Length = 258
Score = 30.3 bits (65), Expect = 9.0
Identities = 14/46 (30%), Positives = 21/46 (45%)
Frame = -3
Query: 376 PRSRPTQSARTGRTASTVXEAGRRVRQAARPRLQHGPPRVEPPRSN 239
P +RPT + G + GR +A+ P PP+ PP+ N
Sbjct: 153 PPARPTVAGFAGESKPRARNRGRTRERASGPAAGTPPPQSAPPKEN 198
>AK025685-1|BAB15217.1| 287|Homo sapiens protein ( Homo sapiens
cDNA: FLJ22032 fis, clone HEP08743. ).
Length = 287
Score = 30.3 bits (65), Expect = 9.0
Identities = 27/86 (31%), Positives = 36/86 (41%)
Frame = -3
Query: 328 TVXEAGRRVRQAARPRLQHGPPRVEPPRSNYTFAGAPFPPRAEVATPPVIGSERLRLQVP 149
TV GR ++ A LQH PP+ PP+ + R+E + PP GS
Sbjct: 115 TVRPRGRSMQALAEEDLQHLPPQPLPPQLSQA------DGRSETSQPPTPGSPSHSPLHS 168
Query: 148 GWRPGEQARRLEGDGAVSSDRPDRDR 71
G RP RR E D + + DR
Sbjct: 169 GPRP----RRRESDPTGPQRQLEEDR 190
>AB065467-1|BAC05726.1| 1520|Homo sapiens seven transmembrane helix
receptor protein.
Length = 1520
Score = 30.3 bits (65), Expect = 9.0
Identities = 20/56 (35%), Positives = 26/56 (46%)
Frame = -3
Query: 178 GSERLRLQVPGWRPGEQARRLEGDGAVSSDRPDRDRALRTSQRRDVLAGQGVATIR 11
G+ R L+ PG P R L+GD A R+ A RT RR AG+ + R
Sbjct: 1464 GTPRCALRTPGEEPPPPTRALKGDSA-RRGCSAREYARRTRGRRSPAAGRAAYSPR 1518
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 109,387,017
Number of Sequences: 237096
Number of extensions: 2297311
Number of successful extensions: 10102
Number of sequences better than 10.0: 60
Number of HSP's better than 10.0 without gapping: 8564
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10013
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10538170902
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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