Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP03_FL5_K21
(846 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY588474-1|AAT94401.1| 104|Apis mellifera defensin 2 protein. 27 0.16
DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chlor... 24 2.0
U15955-1|AAA67443.1| 95|Apis mellifera defensin precursor prot... 23 2.7
AY496432-1|AAS75803.1| 95|Apis mellifera defensin/royalisin pr... 23 2.7
AJ308527-1|CAC33429.1| 57|Apis mellifera defensin protein. 23 2.7
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 23 3.5
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 23 3.5
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 23 4.7
AY338499-1|AAR08420.1| 500|Apis mellifera Kruppel-like protein ... 22 6.2
DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholi... 22 8.2
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr... 22 8.2
>AY588474-1|AAT94401.1| 104|Apis mellifera defensin 2 protein.
Length = 104
Score = 27.5 bits (58), Expect = 0.16
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = +3
Query: 708 HRKVKCSLLTWLGKW 752
HR+V C +L+W KW
Sbjct: 59 HRRVTCDVLSWQSKW 73
>DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chloride
channel protein.
Length = 383
Score = 23.8 bits (49), Expect = 2.0
Identities = 14/43 (32%), Positives = 23/43 (53%), Gaps = 2/43 (4%)
Frame = +2
Query: 176 VYNHKGEVLISRV--YRDDIGRNAVDAFRVNVIHARQQVRSPV 298
V N+ G V + Y D+ R A+D F+ + + ++ RSPV
Sbjct: 297 VNNYMGPVATKAMKGYSDEDLREAIDEFKTPMRNDSERNRSPV 339
>U15955-1|AAA67443.1| 95|Apis mellifera defensin precursor
protein.
Length = 95
Score = 23.4 bits (48), Expect = 2.7
Identities = 10/26 (38%), Positives = 15/26 (57%)
Frame = +3
Query: 708 HRKVKCSLLTWLGKWS*SHICPGCXS 785
HR+V C LL++ G+ + S C S
Sbjct: 41 HRRVTCDLLSFKGQVNDSACAANCLS 66
>AY496432-1|AAS75803.1| 95|Apis mellifera defensin/royalisin
precursor protein.
Length = 95
Score = 23.4 bits (48), Expect = 2.7
Identities = 10/26 (38%), Positives = 15/26 (57%)
Frame = +3
Query: 708 HRKVKCSLLTWLGKWS*SHICPGCXS 785
HR+V C LL++ G+ + S C S
Sbjct: 41 HRRVTCDLLSFKGQVNDSACAANCLS 66
>AJ308527-1|CAC33429.1| 57|Apis mellifera defensin protein.
Length = 57
Score = 23.4 bits (48), Expect = 2.7
Identities = 10/26 (38%), Positives = 15/26 (57%)
Frame = +3
Query: 708 HRKVKCSLLTWLGKWS*SHICPGCXS 785
HR+V C LL++ G+ + S C S
Sbjct: 16 HRRVTCDLLSFKGQVNDSACAANCHS 41
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 23.0 bits (47), Expect = 3.5
Identities = 11/24 (45%), Positives = 15/24 (62%), Gaps = 1/24 (4%)
Frame = -1
Query: 831 FPLASITILS-LIPNLHXGIPDRY 763
F +AS +L+ L+ N H PDRY
Sbjct: 334 FMVASSVVLTVLVLNFHHRTPDRY 357
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 23.0 bits (47), Expect = 3.5
Identities = 11/24 (45%), Positives = 15/24 (62%), Gaps = 1/24 (4%)
Frame = -1
Query: 831 FPLASITILS-LIPNLHXGIPDRY 763
F +AS +L+ L+ N H PDRY
Sbjct: 334 FMVASSVVLTVLVLNFHHRTPDRY 357
>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
AbsCAM-Ig7A protein.
Length = 1919
Score = 22.6 bits (46), Expect = 4.7
Identities = 8/24 (33%), Positives = 15/24 (62%)
Frame = -3
Query: 223 ISVDSRDQHLAFMVINEQAPDHCG 152
+ V + DQ+ + ++I +PDH G
Sbjct: 658 VHVTNMDQYNSILMIEHLSPDHNG 681
>AY338499-1|AAR08420.1| 500|Apis mellifera Kruppel-like protein 1
protein.
Length = 500
Score = 22.2 bits (45), Expect = 6.2
Identities = 10/28 (35%), Positives = 13/28 (46%)
Frame = -2
Query: 692 HTLVHQGTARFVCT*CLHGASQSDQLLV 609
H +H G CT C QS QL++
Sbjct: 166 HMRIHTGERPHKCTVCSKTFIQSGQLVI 193
Score = 22.2 bits (45), Expect = 6.2
Identities = 11/28 (39%), Positives = 13/28 (46%)
Frame = -2
Query: 692 HTLVHQGTARFVCT*CLHGASQSDQLLV 609
H H G +VC C G + S QL V
Sbjct: 194 HMRTHTGEKPYVCKACGKGFTCSKQLKV 221
>DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholine
receptor alpha9subunit protein.
Length = 431
Score = 21.8 bits (44), Expect = 8.2
Identities = 10/54 (18%), Positives = 23/54 (42%)
Frame = +2
Query: 548 TFITQQGIKSASKEEQAQITSQVTGQIGWRREGIKYRRNELXLDVLEYVNLLMS 709
T ++ QGI E ++++ T + WR + + Y+ +L++
Sbjct: 373 TKLSSQGILGEDVENNSEVSKSRTKESAWRHFAAIIEWLSFFIVIFTYIIILIT 426
>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
protein.
Length = 1370
Score = 21.8 bits (44), Expect = 8.2
Identities = 8/24 (33%), Positives = 10/24 (41%)
Frame = -3
Query: 367 LCDCCQPNICTLDMEERCACNVGN 296
LC CC + C +M C N
Sbjct: 746 LCHCCDFDACDCEMTCPAGCKCYN 769
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 236,420
Number of Sequences: 438
Number of extensions: 4866
Number of successful extensions: 22
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 27188448
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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