BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP03_FL5_K16
(895 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X73460-1|CAA51839.1| 403|Homo sapiens ribosomal protein L3 prot... 345 2e-94
CR456566-1|CAG30452.1| 403|Homo sapiens RPL3 protein. 345 2e-94
BC107711-1|AAI07712.1| 403|Homo sapiens ribosomal protein L3 pr... 345 2e-94
BC088373-1|AAH88373.1| 403|Homo sapiens ribosomal protein L3 pr... 345 2e-94
BC063662-1|AAH63662.1| 403|Homo sapiens ribosomal protein L3 pr... 345 2e-94
BC015767-1|AAH15767.1| 403|Homo sapiens ribosomal protein L3 pr... 345 2e-94
BC015032-1|AAH15032.1| 403|Homo sapiens ribosomal protein L3, i... 345 2e-94
BC014017-1|AAH14017.1| 403|Homo sapiens ribosomal protein L3 pr... 345 2e-94
BC013674-1|AAH13674.1| 403|Homo sapiens ribosomal protein L3 pr... 345 2e-94
BC012786-1|AAH12786.1| 403|Homo sapiens ribosomal protein L3 pr... 345 2e-94
BC012146-1|AAH12146.1| 403|Homo sapiens ribosomal protein L3 pr... 345 2e-94
BC008492-1|AAH08492.1| 403|Homo sapiens ribosomal protein L3 pr... 345 2e-94
BC008003-1|AAH08003.1| 403|Homo sapiens ribosomal protein L3 pr... 345 2e-94
BC006483-1|AAH06483.1| 403|Homo sapiens ribosomal protein L3, i... 345 2e-94
BC002408-1|AAH02408.1| 403|Homo sapiens ribosomal protein L3 pr... 345 2e-94
AL022326-1|CAA18450.1| 403|Homo sapiens ribosomal protein L3 pr... 345 2e-94
AB062291-1|BAB93474.1| 403|Homo sapiens ribosomal protein L3 pr... 345 2e-94
L22453-1|AAA91344.1| 277|Homo sapiens TARBP-b protein. 343 5e-94
M90054-1|AAA60291.1| 398|Homo sapiens ribosomal protein L3 prot... 334 3e-91
U65581-1|AAC50777.1| 407|Homo sapiens ribosomal protein L3-like... 306 7e-83
BC050413-1|AAH50413.1| 407|Homo sapiens ribosomal protein L3-li... 306 7e-83
AE006640-5|AAK61301.1| 406|Homo sapiens 60S ribosomal protein L... 304 3e-82
BC022790-1|AAH22790.1| 374|Homo sapiens Unknown (protein for IM... 289 1e-77
AJ238852-1|CAB76201.1| 343|Homo sapiens ribosomal protein L3 pr... 233 6e-61
BC004323-1|AAH04323.2| 292|Homo sapiens RPL3 protein protein. 140 6e-33
BC036582-1|AAH36582.1| 251|Homo sapiens RPL3 protein protein. 97 1e-19
>X73460-1|CAA51839.1| 403|Homo sapiens ribosomal protein L3
protein.
Length = 403
Score = 345 bits (847), Expect = 2e-94
Identities = 162/261 (62%), Positives = 190/261 (72%)
Frame = +1
Query: 34 MSHRKFSAPRHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREP 213
MSHRKFSAPRHGS+GF P+KRS RHRGKVK+FPKDDPSKPVHLTAF+GYKAGMTH+VRE
Sbjct: 1 MSHRKFSAPRHGSLGFLPRKRSSRHRGKVKSFPKDDPSKPVHLTAFLGYKAGMTHIVREV 60
Query: 214 DRPGSKINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYK 393
DRPGSK+NKKE+VEAVTI+ETPPMV VG+VGY+ETP GLR TV+AEH+S++C+RRFYK
Sbjct: 61 DRPGSKVNKKEVVEAVTIVETPPMVVVGIVGYVETPRGLRTFKTVFAEHISDECKRRFYK 120
Query: 394 NWYXXXXXXXXXXXXXWQDELGRKSIEKDFKKMIRYCSVVRVIAHTQMKLLKQRQKKAHI 573
NW+ WQDE G+K +EKDF M +YC V+RVIAHTQM+LL RQKKAH+
Sbjct: 121 NWHKSKKKAFTKYCKKWQDEDGKKQLEKDFSSMKKYCQVIRVIAHTQMRLLPLRQKKAHL 180
Query: 574 MEIQLNGGTSRTK*NGPENIWRNLSLVDSVFAQDEXIDCXGVTKGKGYKXCXFSLGPKEX 753
MEIQ+NGGT K + V+ VF QDE ID GVTKGKGYK K+
Sbjct: 181 MEIQVNGGTVAEKLDWARERLEQQVPVNQVFGQDEMIDVIGVTKGKGYKGVTSRWHTKK- 239
Query: 754 TP*XXXXVLGKLPAFGXWXPS 816
P L K+ G W P+
Sbjct: 240 LPRKTHRGLRKVACIGAWHPA 260
Score = 38.7 bits (86), Expect = 0.028
Identities = 24/63 (38%), Positives = 28/63 (44%)
Frame = +2
Query: 704 RAKDTXGVXSRWXPKXLPRXXHXGS*ESCLXLXLGXLLXVXFXVXRAGQKGXXPRS*XXX 883
+ K GV SRW K LPR H G + V F V RAGQKG R+
Sbjct: 224 KGKGYKGVTSRWHTKKLPRKTHRGL-RKVACIGAWHPARVAFSVARAGQKGYHHRTEINK 282
Query: 884 KIF 892
KI+
Sbjct: 283 KIY 285
>CR456566-1|CAG30452.1| 403|Homo sapiens RPL3 protein.
Length = 403
Score = 345 bits (847), Expect = 2e-94
Identities = 162/261 (62%), Positives = 190/261 (72%)
Frame = +1
Query: 34 MSHRKFSAPRHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREP 213
MSHRKFSAPRHGS+GF P+KRS RHRGKVK+FPKDDPSKPVHLTAF+GYKAGMTH+VRE
Sbjct: 1 MSHRKFSAPRHGSLGFLPRKRSSRHRGKVKSFPKDDPSKPVHLTAFLGYKAGMTHIVREV 60
Query: 214 DRPGSKINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYK 393
DRPGSK+NKKE+VEAVTI+ETPPMV VG+VGY+ETP GLR TV+AEH+S++C+RRFYK
Sbjct: 61 DRPGSKVNKKEVVEAVTIVETPPMVVVGIVGYVETPRGLRTFKTVFAEHISDECKRRFYK 120
Query: 394 NWYXXXXXXXXXXXXXWQDELGRKSIEKDFKKMIRYCSVVRVIAHTQMKLLKQRQKKAHI 573
NW+ WQDE G+K +EKDF M +YC V+RVIAHTQM+LL RQKKAH+
Sbjct: 121 NWHKSKKKAFTKYCKKWQDEDGKKQLEKDFSSMKKYCQVIRVIAHTQMRLLPLRQKKAHL 180
Query: 574 MEIQLNGGTSRTK*NGPENIWRNLSLVDSVFAQDEXIDCXGVTKGKGYKXCXFSLGPKEX 753
MEIQ+NGGT K + V+ VF QDE ID GVTKGKGYK K+
Sbjct: 181 MEIQVNGGTVAEKLDWARERLEQQVPVNQVFGQDEMIDVIGVTKGKGYKGVTSRWHTKK- 239
Query: 754 TP*XXXXVLGKLPAFGXWXPS 816
P L K+ G W P+
Sbjct: 240 LPRKTHRGLRKVACIGAWHPA 260
Score = 38.7 bits (86), Expect = 0.028
Identities = 24/63 (38%), Positives = 28/63 (44%)
Frame = +2
Query: 704 RAKDTXGVXSRWXPKXLPRXXHXGS*ESCLXLXLGXLLXVXFXVXRAGQKGXXPRS*XXX 883
+ K GV SRW K LPR H G + V F V RAGQKG R+
Sbjct: 224 KGKGYKGVTSRWHTKKLPRKTHRGL-RKVACIGAWHPARVAFSVARAGQKGYHHRTEINK 282
Query: 884 KIF 892
KI+
Sbjct: 283 KIY 285
>BC107711-1|AAI07712.1| 403|Homo sapiens ribosomal protein L3
protein.
Length = 403
Score = 345 bits (847), Expect = 2e-94
Identities = 162/261 (62%), Positives = 190/261 (72%)
Frame = +1
Query: 34 MSHRKFSAPRHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREP 213
MSHRKFSAPRHGS+GF P+KRS RHRGKVK+FPKDDPSKPVHLTAF+GYKAGMTH+VRE
Sbjct: 1 MSHRKFSAPRHGSLGFLPRKRSSRHRGKVKSFPKDDPSKPVHLTAFLGYKAGMTHIVREV 60
Query: 214 DRPGSKINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYK 393
DRPGSK+NKKE+VEAVTI+ETPPMV VG+VGY+ETP GLR TV+AEH+S++C+RRFYK
Sbjct: 61 DRPGSKVNKKEVVEAVTIVETPPMVVVGIVGYVETPRGLRTFKTVFAEHISDECKRRFYK 120
Query: 394 NWYXXXXXXXXXXXXXWQDELGRKSIEKDFKKMIRYCSVVRVIAHTQMKLLKQRQKKAHI 573
NW+ WQDE G+K +EKDF M +YC V+RVIAHTQM+LL RQKKAH+
Sbjct: 121 NWHKSKKKAFTKYCKKWQDEDGKKQLEKDFSSMKKYCQVIRVIAHTQMRLLPLRQKKAHL 180
Query: 574 MEIQLNGGTSRTK*NGPENIWRNLSLVDSVFAQDEXIDCXGVTKGKGYKXCXFSLGPKEX 753
MEIQ+NGGT K + V+ VF QDE ID GVTKGKGYK K+
Sbjct: 181 MEIQVNGGTVAEKLDWARERLEQQVPVNQVFGQDEMIDVIGVTKGKGYKGVTSRWHTKK- 239
Query: 754 TP*XXXXVLGKLPAFGXWXPS 816
P L K+ G W P+
Sbjct: 240 LPRKTHRGLRKVACIGAWHPA 260
Score = 38.7 bits (86), Expect = 0.028
Identities = 24/63 (38%), Positives = 28/63 (44%)
Frame = +2
Query: 704 RAKDTXGVXSRWXPKXLPRXXHXGS*ESCLXLXLGXLLXVXFXVXRAGQKGXXPRS*XXX 883
+ K GV SRW K LPR H G + V F V RAGQKG R+
Sbjct: 224 KGKGYKGVTSRWHTKKLPRKTHRGL-RKVACIGAWHPARVAFSVARAGQKGYHHRTEINK 282
Query: 884 KIF 892
KI+
Sbjct: 283 KIY 285
>BC088373-1|AAH88373.1| 403|Homo sapiens ribosomal protein L3
protein.
Length = 403
Score = 345 bits (847), Expect = 2e-94
Identities = 162/261 (62%), Positives = 190/261 (72%)
Frame = +1
Query: 34 MSHRKFSAPRHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREP 213
MSHRKFSAPRHGS+GF P+KRS RHRGKVK+FPKDDPSKPVHLTAF+GYKAGMTH+VRE
Sbjct: 1 MSHRKFSAPRHGSLGFLPRKRSSRHRGKVKSFPKDDPSKPVHLTAFLGYKAGMTHIVREV 60
Query: 214 DRPGSKINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYK 393
DRPGSK+NKKE+VEAVTI+ETPPMV VG+VGY+ETP GLR TV+AEH+S++C+RRFYK
Sbjct: 61 DRPGSKVNKKEVVEAVTIVETPPMVVVGIVGYVETPRGLRTFKTVFAEHISDECKRRFYK 120
Query: 394 NWYXXXXXXXXXXXXXWQDELGRKSIEKDFKKMIRYCSVVRVIAHTQMKLLKQRQKKAHI 573
NW+ WQDE G+K +EKDF M +YC V+RVIAHTQM+LL RQKKAH+
Sbjct: 121 NWHKSKKKAFTKYCKKWQDEDGKKQLEKDFSSMKKYCQVIRVIAHTQMRLLPLRQKKAHL 180
Query: 574 MEIQLNGGTSRTK*NGPENIWRNLSLVDSVFAQDEXIDCXGVTKGKGYKXCXFSLGPKEX 753
MEIQ+NGGT K + V+ VF QDE ID GVTKGKGYK K+
Sbjct: 181 MEIQVNGGTVAEKLDWARERLEQQVPVNQVFGQDEMIDVIGVTKGKGYKGVTSRWHTKK- 239
Query: 754 TP*XXXXVLGKLPAFGXWXPS 816
P L K+ G W P+
Sbjct: 240 LPRKTHRGLRKVACIGAWHPA 260
Score = 38.7 bits (86), Expect = 0.028
Identities = 24/63 (38%), Positives = 28/63 (44%)
Frame = +2
Query: 704 RAKDTXGVXSRWXPKXLPRXXHXGS*ESCLXLXLGXLLXVXFXVXRAGQKGXXPRS*XXX 883
+ K GV SRW K LPR H G + V F V RAGQKG R+
Sbjct: 224 KGKGYKGVTSRWHTKKLPRKTHRGL-RKVACIGAWHPARVAFSVARAGQKGYHHRTEINK 282
Query: 884 KIF 892
KI+
Sbjct: 283 KIY 285
>BC063662-1|AAH63662.1| 403|Homo sapiens ribosomal protein L3
protein.
Length = 403
Score = 345 bits (847), Expect = 2e-94
Identities = 162/261 (62%), Positives = 190/261 (72%)
Frame = +1
Query: 34 MSHRKFSAPRHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREP 213
MSHRKFSAPRHGS+GF P+KRS RHRGKVK+FPKDDPSKPVHLTAF+GYKAGMTH+VRE
Sbjct: 1 MSHRKFSAPRHGSLGFLPRKRSSRHRGKVKSFPKDDPSKPVHLTAFLGYKAGMTHIVREV 60
Query: 214 DRPGSKINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYK 393
DRPGSK+NKKE+VEAVTI+ETPPMV VG+VGY+ETP GLR TV+AEH+S++C+RRFYK
Sbjct: 61 DRPGSKVNKKEVVEAVTIVETPPMVVVGIVGYVETPRGLRTFKTVFAEHISDECKRRFYK 120
Query: 394 NWYXXXXXXXXXXXXXWQDELGRKSIEKDFKKMIRYCSVVRVIAHTQMKLLKQRQKKAHI 573
NW+ WQDE G+K +EKDF M +YC V+RVIAHTQM+LL RQKKAH+
Sbjct: 121 NWHKSKKKAFTKYCKKWQDEDGKKQLEKDFSSMKKYCQVIRVIAHTQMRLLPLRQKKAHL 180
Query: 574 MEIQLNGGTSRTK*NGPENIWRNLSLVDSVFAQDEXIDCXGVTKGKGYKXCXFSLGPKEX 753
MEIQ+NGGT K + V+ VF QDE ID GVTKGKGYK K+
Sbjct: 181 MEIQVNGGTVAEKLDWARERLEQQVPVNQVFGQDEMIDVIGVTKGKGYKGVTSRWHTKK- 239
Query: 754 TP*XXXXVLGKLPAFGXWXPS 816
P L K+ G W P+
Sbjct: 240 LPRKTHRGLRKVACIGAWHPA 260
Score = 38.7 bits (86), Expect = 0.028
Identities = 24/63 (38%), Positives = 28/63 (44%)
Frame = +2
Query: 704 RAKDTXGVXSRWXPKXLPRXXHXGS*ESCLXLXLGXLLXVXFXVXRAGQKGXXPRS*XXX 883
+ K GV SRW K LPR H G + V F V RAGQKG R+
Sbjct: 224 KGKGYKGVTSRWHTKKLPRKTHRGL-RKVACIGAWHPARVAFSVARAGQKGYHHRTEINK 282
Query: 884 KIF 892
KI+
Sbjct: 283 KIY 285
>BC015767-1|AAH15767.1| 403|Homo sapiens ribosomal protein L3
protein.
Length = 403
Score = 345 bits (847), Expect = 2e-94
Identities = 162/261 (62%), Positives = 190/261 (72%)
Frame = +1
Query: 34 MSHRKFSAPRHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREP 213
MSHRKFSAPRHGS+GF P+KRS RHRGKVK+FPKDDPSKPVHLTAF+GYKAGMTH+VRE
Sbjct: 1 MSHRKFSAPRHGSLGFLPRKRSSRHRGKVKSFPKDDPSKPVHLTAFLGYKAGMTHIVREV 60
Query: 214 DRPGSKINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYK 393
DRPGSK+NKKE+VEAVTI+ETPPMV VG+VGY+ETP GLR TV+AEH+S++C+RRFYK
Sbjct: 61 DRPGSKVNKKEVVEAVTIVETPPMVVVGIVGYVETPRGLRTFKTVFAEHISDECKRRFYK 120
Query: 394 NWYXXXXXXXXXXXXXWQDELGRKSIEKDFKKMIRYCSVVRVIAHTQMKLLKQRQKKAHI 573
NW+ WQDE G+K +EKDF M +YC V+RVIAHTQM+LL RQKKAH+
Sbjct: 121 NWHKSKKKAFTKYCKKWQDEDGKKQLEKDFSSMKKYCQVIRVIAHTQMRLLPLRQKKAHL 180
Query: 574 MEIQLNGGTSRTK*NGPENIWRNLSLVDSVFAQDEXIDCXGVTKGKGYKXCXFSLGPKEX 753
MEIQ+NGGT K + V+ VF QDE ID GVTKGKGYK K+
Sbjct: 181 MEIQVNGGTVAEKLDWARERLEQQVPVNQVFGQDEMIDVIGVTKGKGYKGVTSRWHTKK- 239
Query: 754 TP*XXXXVLGKLPAFGXWXPS 816
P L K+ G W P+
Sbjct: 240 LPRKTHRGLRKVACIGAWHPA 260
Score = 38.7 bits (86), Expect = 0.028
Identities = 24/63 (38%), Positives = 28/63 (44%)
Frame = +2
Query: 704 RAKDTXGVXSRWXPKXLPRXXHXGS*ESCLXLXLGXLLXVXFXVXRAGQKGXXPRS*XXX 883
+ K GV SRW K LPR H G + V F V RAGQKG R+
Sbjct: 224 KGKGYKGVTSRWHTKKLPRKTHRGL-RKVACIGAWHPARVAFSVARAGQKGYHHRTEINK 282
Query: 884 KIF 892
KI+
Sbjct: 283 KIY 285
>BC015032-1|AAH15032.1| 403|Homo sapiens ribosomal protein L3,
isoform a protein.
Length = 403
Score = 345 bits (847), Expect = 2e-94
Identities = 162/261 (62%), Positives = 190/261 (72%)
Frame = +1
Query: 34 MSHRKFSAPRHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREP 213
MSHRKFSAPRHGS+GF P+KRS RHRGKVK+FPKDDPSKPVHLTAF+GYKAGMTH+VRE
Sbjct: 1 MSHRKFSAPRHGSLGFLPRKRSSRHRGKVKSFPKDDPSKPVHLTAFLGYKAGMTHIVREV 60
Query: 214 DRPGSKINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYK 393
DRPGSK+NKKE+VEAVTI+ETPPMV VG+VGY+ETP GLR TV+AEH+S++C+RRFYK
Sbjct: 61 DRPGSKVNKKEVVEAVTIVETPPMVVVGIVGYVETPRGLRTFKTVFAEHISDECKRRFYK 120
Query: 394 NWYXXXXXXXXXXXXXWQDELGRKSIEKDFKKMIRYCSVVRVIAHTQMKLLKQRQKKAHI 573
NW+ WQDE G+K +EKDF M +YC V+RVIAHTQM+LL RQKKAH+
Sbjct: 121 NWHKSKKKAFTKYCKKWQDEDGKKQLEKDFSSMKKYCQVIRVIAHTQMRLLPLRQKKAHL 180
Query: 574 MEIQLNGGTSRTK*NGPENIWRNLSLVDSVFAQDEXIDCXGVTKGKGYKXCXFSLGPKEX 753
MEIQ+NGGT K + V+ VF QDE ID GVTKGKGYK K+
Sbjct: 181 MEIQVNGGTVAEKLDWARERLEQQVPVNQVFGQDEMIDVIGVTKGKGYKGVTSRWHTKK- 239
Query: 754 TP*XXXXVLGKLPAFGXWXPS 816
P L K+ G W P+
Sbjct: 240 LPRKTHRGLRKVACIGAWHPA 260
Score = 38.7 bits (86), Expect = 0.028
Identities = 24/63 (38%), Positives = 28/63 (44%)
Frame = +2
Query: 704 RAKDTXGVXSRWXPKXLPRXXHXGS*ESCLXLXLGXLLXVXFXVXRAGQKGXXPRS*XXX 883
+ K GV SRW K LPR H G + V F V RAGQKG R+
Sbjct: 224 KGKGYKGVTSRWHTKKLPRKTHRGL-RKVACIGAWHPARVAFSVARAGQKGYHHRTEINK 282
Query: 884 KIF 892
KI+
Sbjct: 283 KIY 285
>BC014017-1|AAH14017.1| 403|Homo sapiens ribosomal protein L3
protein.
Length = 403
Score = 345 bits (847), Expect = 2e-94
Identities = 162/261 (62%), Positives = 190/261 (72%)
Frame = +1
Query: 34 MSHRKFSAPRHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREP 213
MSHRKFSAPRHGS+GF P+KRS RHRGKVK+FPKDDPSKPVHLTAF+GYKAGMTH+VRE
Sbjct: 1 MSHRKFSAPRHGSLGFLPRKRSSRHRGKVKSFPKDDPSKPVHLTAFLGYKAGMTHIVREV 60
Query: 214 DRPGSKINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYK 393
DRPGSK+NKKE+VEAVTI+ETPPMV VG+VGY+ETP GLR TV+AEH+S++C+RRFYK
Sbjct: 61 DRPGSKVNKKEVVEAVTIVETPPMVVVGIVGYVETPRGLRTFKTVFAEHISDECKRRFYK 120
Query: 394 NWYXXXXXXXXXXXXXWQDELGRKSIEKDFKKMIRYCSVVRVIAHTQMKLLKQRQKKAHI 573
NW+ WQDE G+K +EKDF M +YC V+RVIAHTQM+LL RQKKAH+
Sbjct: 121 NWHKSKKKAFTKYCKKWQDEDGKKQLEKDFSSMKKYCQVIRVIAHTQMRLLPLRQKKAHL 180
Query: 574 MEIQLNGGTSRTK*NGPENIWRNLSLVDSVFAQDEXIDCXGVTKGKGYKXCXFSLGPKEX 753
MEIQ+NGGT K + V+ VF QDE ID GVTKGKGYK K+
Sbjct: 181 MEIQVNGGTVAEKLDWARERLEQQVPVNQVFGQDEMIDVIGVTKGKGYKGVTSRWHTKK- 239
Query: 754 TP*XXXXVLGKLPAFGXWXPS 816
P L K+ G W P+
Sbjct: 240 LPRKTHRGLRKVACIGAWHPA 260
Score = 38.7 bits (86), Expect = 0.028
Identities = 24/63 (38%), Positives = 28/63 (44%)
Frame = +2
Query: 704 RAKDTXGVXSRWXPKXLPRXXHXGS*ESCLXLXLGXLLXVXFXVXRAGQKGXXPRS*XXX 883
+ K GV SRW K LPR H G + V F V RAGQKG R+
Sbjct: 224 KGKGYKGVTSRWHTKKLPRKTHRGL-RKVACIGAWHPARVAFSVARAGQKGYHHRTEINK 282
Query: 884 KIF 892
KI+
Sbjct: 283 KIY 285
>BC013674-1|AAH13674.1| 403|Homo sapiens ribosomal protein L3
protein.
Length = 403
Score = 345 bits (847), Expect = 2e-94
Identities = 162/261 (62%), Positives = 190/261 (72%)
Frame = +1
Query: 34 MSHRKFSAPRHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREP 213
MSHRKFSAPRHGS+GF P+KRS RHRGKVK+FPKDDPSKPVHLTAF+GYKAGMTH+VRE
Sbjct: 1 MSHRKFSAPRHGSLGFLPRKRSSRHRGKVKSFPKDDPSKPVHLTAFLGYKAGMTHIVREV 60
Query: 214 DRPGSKINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYK 393
DRPGSK+NKKE+VEAVTI+ETPPMV VG+VGY+ETP GLR TV+AEH+S++C+RRFYK
Sbjct: 61 DRPGSKVNKKEVVEAVTIVETPPMVVVGIVGYVETPRGLRTFKTVFAEHISDECKRRFYK 120
Query: 394 NWYXXXXXXXXXXXXXWQDELGRKSIEKDFKKMIRYCSVVRVIAHTQMKLLKQRQKKAHI 573
NW+ WQDE G+K +EKDF M +YC V+RVIAHTQM+LL RQKKAH+
Sbjct: 121 NWHKSKKKAFTKYCKKWQDEDGKKQLEKDFSSMKKYCQVIRVIAHTQMRLLPLRQKKAHL 180
Query: 574 MEIQLNGGTSRTK*NGPENIWRNLSLVDSVFAQDEXIDCXGVTKGKGYKXCXFSLGPKEX 753
MEIQ+NGGT K + V+ VF QDE ID GVTKGKGYK K+
Sbjct: 181 MEIQVNGGTVAEKLDWARERLEQQVPVNQVFGQDEMIDVIGVTKGKGYKGVTSRWHTKK- 239
Query: 754 TP*XXXXVLGKLPAFGXWXPS 816
P L K+ G W P+
Sbjct: 240 LPRKTHRGLRKVACIGAWHPA 260
Score = 38.7 bits (86), Expect = 0.028
Identities = 24/63 (38%), Positives = 28/63 (44%)
Frame = +2
Query: 704 RAKDTXGVXSRWXPKXLPRXXHXGS*ESCLXLXLGXLLXVXFXVXRAGQKGXXPRS*XXX 883
+ K GV SRW K LPR H G + V F V RAGQKG R+
Sbjct: 224 KGKGYKGVTSRWHTKKLPRKTHRGL-RKVACIGAWHPARVAFSVARAGQKGYHHRTEINK 282
Query: 884 KIF 892
KI+
Sbjct: 283 KIY 285
>BC012786-1|AAH12786.1| 403|Homo sapiens ribosomal protein L3
protein.
Length = 403
Score = 345 bits (847), Expect = 2e-94
Identities = 162/261 (62%), Positives = 190/261 (72%)
Frame = +1
Query: 34 MSHRKFSAPRHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREP 213
MSHRKFSAPRHGS+GF P+KRS RHRGKVK+FPKDDPSKPVHLTAF+GYKAGMTH+VRE
Sbjct: 1 MSHRKFSAPRHGSLGFLPRKRSSRHRGKVKSFPKDDPSKPVHLTAFLGYKAGMTHIVREV 60
Query: 214 DRPGSKINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYK 393
DRPGSK+NKKE+VEAVTI+ETPPMV VG+VGY+ETP GLR TV+AEH+S++C+RRFYK
Sbjct: 61 DRPGSKVNKKEVVEAVTIVETPPMVVVGIVGYVETPRGLRTFKTVFAEHISDECKRRFYK 120
Query: 394 NWYXXXXXXXXXXXXXWQDELGRKSIEKDFKKMIRYCSVVRVIAHTQMKLLKQRQKKAHI 573
NW+ WQDE G+K +EKDF M +YC V+RVIAHTQM+LL RQKKAH+
Sbjct: 121 NWHKSKKKAFTKYCKKWQDEDGKKQLEKDFSSMKKYCQVIRVIAHTQMRLLPLRQKKAHL 180
Query: 574 MEIQLNGGTSRTK*NGPENIWRNLSLVDSVFAQDEXIDCXGVTKGKGYKXCXFSLGPKEX 753
MEIQ+NGGT K + V+ VF QDE ID GVTKGKGYK K+
Sbjct: 181 MEIQVNGGTVAEKLDWARERLEQQVPVNQVFGQDEMIDVIGVTKGKGYKGVTSRWHTKK- 239
Query: 754 TP*XXXXVLGKLPAFGXWXPS 816
P L K+ G W P+
Sbjct: 240 LPRKTHRGLRKVACIGAWHPA 260
Score = 38.7 bits (86), Expect = 0.028
Identities = 24/63 (38%), Positives = 28/63 (44%)
Frame = +2
Query: 704 RAKDTXGVXSRWXPKXLPRXXHXGS*ESCLXLXLGXLLXVXFXVXRAGQKGXXPRS*XXX 883
+ K GV SRW K LPR H G + V F V RAGQKG R+
Sbjct: 224 KGKGYKGVTSRWHTKKLPRKTHRGL-RKVACIGAWHPARVAFSVARAGQKGYHHRTEINK 282
Query: 884 KIF 892
KI+
Sbjct: 283 KIY 285
>BC012146-1|AAH12146.1| 403|Homo sapiens ribosomal protein L3
protein.
Length = 403
Score = 345 bits (847), Expect = 2e-94
Identities = 162/261 (62%), Positives = 190/261 (72%)
Frame = +1
Query: 34 MSHRKFSAPRHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREP 213
MSHRKFSAPRHGS+GF P+KRS RHRGKVK+FPKDDPSKPVHLTAF+GYKAGMTH+VRE
Sbjct: 1 MSHRKFSAPRHGSLGFLPRKRSSRHRGKVKSFPKDDPSKPVHLTAFLGYKAGMTHIVREV 60
Query: 214 DRPGSKINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYK 393
DRPGSK+NKKE+VEAVTI+ETPPMV VG+VGY+ETP GLR TV+AEH+S++C+RRFYK
Sbjct: 61 DRPGSKVNKKEVVEAVTIVETPPMVVVGIVGYVETPRGLRTFKTVFAEHISDECKRRFYK 120
Query: 394 NWYXXXXXXXXXXXXXWQDELGRKSIEKDFKKMIRYCSVVRVIAHTQMKLLKQRQKKAHI 573
NW+ WQDE G+K +EKDF M +YC V+RVIAHTQM+LL RQKKAH+
Sbjct: 121 NWHKSKKKAFTKYCKKWQDEDGKKQLEKDFSSMKKYCQVIRVIAHTQMRLLPLRQKKAHL 180
Query: 574 MEIQLNGGTSRTK*NGPENIWRNLSLVDSVFAQDEXIDCXGVTKGKGYKXCXFSLGPKEX 753
MEIQ+NGGT K + V+ VF QDE ID GVTKGKGYK K+
Sbjct: 181 MEIQVNGGTVAEKLDWARERLEQQVPVNQVFGQDEMIDVIGVTKGKGYKGVTSRWHTKK- 239
Query: 754 TP*XXXXVLGKLPAFGXWXPS 816
P L K+ G W P+
Sbjct: 240 LPRKTHRGLRKVACIGAWHPA 260
Score = 38.7 bits (86), Expect = 0.028
Identities = 24/63 (38%), Positives = 28/63 (44%)
Frame = +2
Query: 704 RAKDTXGVXSRWXPKXLPRXXHXGS*ESCLXLXLGXLLXVXFXVXRAGQKGXXPRS*XXX 883
+ K GV SRW K LPR H G + V F V RAGQKG R+
Sbjct: 224 KGKGYKGVTSRWHTKKLPRKTHRGL-RKVACIGAWHPARVAFSVARAGQKGYHHRTEINK 282
Query: 884 KIF 892
KI+
Sbjct: 283 KIY 285
>BC008492-1|AAH08492.1| 403|Homo sapiens ribosomal protein L3
protein.
Length = 403
Score = 345 bits (847), Expect = 2e-94
Identities = 162/261 (62%), Positives = 190/261 (72%)
Frame = +1
Query: 34 MSHRKFSAPRHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREP 213
MSHRKFSAPRHGS+GF P+KRS RHRGKVK+FPKDDPSKPVHLTAF+GYKAGMTH+VRE
Sbjct: 1 MSHRKFSAPRHGSLGFLPRKRSSRHRGKVKSFPKDDPSKPVHLTAFLGYKAGMTHIVREV 60
Query: 214 DRPGSKINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYK 393
DRPGSK+NKKE+VEAVTI+ETPPMV VG+VGY+ETP GLR TV+AEH+S++C+RRFYK
Sbjct: 61 DRPGSKVNKKEVVEAVTIVETPPMVVVGIVGYVETPRGLRTFKTVFAEHISDECKRRFYK 120
Query: 394 NWYXXXXXXXXXXXXXWQDELGRKSIEKDFKKMIRYCSVVRVIAHTQMKLLKQRQKKAHI 573
NW+ WQDE G+K +EKDF M +YC V+RVIAHTQM+LL RQKKAH+
Sbjct: 121 NWHKSKKKAFTKYCKKWQDEDGKKQLEKDFSSMKKYCQVIRVIAHTQMRLLPLRQKKAHL 180
Query: 574 MEIQLNGGTSRTK*NGPENIWRNLSLVDSVFAQDEXIDCXGVTKGKGYKXCXFSLGPKEX 753
MEIQ+NGGT K + V+ VF QDE ID GVTKGKGYK K+
Sbjct: 181 MEIQVNGGTVAEKLDWARERLEQQVPVNQVFGQDEMIDVIGVTKGKGYKGVTSRWHTKK- 239
Query: 754 TP*XXXXVLGKLPAFGXWXPS 816
P L K+ G W P+
Sbjct: 240 LPRKTHRGLRKVACIGAWHPA 260
Score = 38.7 bits (86), Expect = 0.028
Identities = 24/63 (38%), Positives = 28/63 (44%)
Frame = +2
Query: 704 RAKDTXGVXSRWXPKXLPRXXHXGS*ESCLXLXLGXLLXVXFXVXRAGQKGXXPRS*XXX 883
+ K GV SRW K LPR H G + V F V RAGQKG R+
Sbjct: 224 KGKGYKGVTSRWHTKKLPRKTHRGL-RKVACIGAWHPARVAFSVARAGQKGYHHRTEINK 282
Query: 884 KIF 892
KI+
Sbjct: 283 KIY 285
>BC008003-1|AAH08003.1| 403|Homo sapiens ribosomal protein L3
protein.
Length = 403
Score = 345 bits (847), Expect = 2e-94
Identities = 162/261 (62%), Positives = 190/261 (72%)
Frame = +1
Query: 34 MSHRKFSAPRHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREP 213
MSHRKFSAPRHGS+GF P+KRS RHRGKVK+FPKDDPSKPVHLTAF+GYKAGMTH+VRE
Sbjct: 1 MSHRKFSAPRHGSLGFLPRKRSSRHRGKVKSFPKDDPSKPVHLTAFLGYKAGMTHIVREV 60
Query: 214 DRPGSKINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYK 393
DRPGSK+NKKE+VEAVTI+ETPPMV VG+VGY+ETP GLR TV+AEH+S++C+RRFYK
Sbjct: 61 DRPGSKVNKKEVVEAVTIVETPPMVVVGIVGYVETPRGLRTFKTVFAEHISDECKRRFYK 120
Query: 394 NWYXXXXXXXXXXXXXWQDELGRKSIEKDFKKMIRYCSVVRVIAHTQMKLLKQRQKKAHI 573
NW+ WQDE G+K +EKDF M +YC V+RVIAHTQM+LL RQKKAH+
Sbjct: 121 NWHKSKKKAFTKYCKKWQDEDGKKQLEKDFSSMKKYCQVIRVIAHTQMRLLPLRQKKAHL 180
Query: 574 MEIQLNGGTSRTK*NGPENIWRNLSLVDSVFAQDEXIDCXGVTKGKGYKXCXFSLGPKEX 753
MEIQ+NGGT K + V+ VF QDE ID GVTKGKGYK K+
Sbjct: 181 MEIQVNGGTVAEKLDWARERLEQQVPVNQVFGQDEMIDVIGVTKGKGYKGVTSRWHTKK- 239
Query: 754 TP*XXXXVLGKLPAFGXWXPS 816
P L K+ G W P+
Sbjct: 240 LPRKTHRGLRKVACIGAWHPA 260
Score = 38.7 bits (86), Expect = 0.028
Identities = 24/63 (38%), Positives = 28/63 (44%)
Frame = +2
Query: 704 RAKDTXGVXSRWXPKXLPRXXHXGS*ESCLXLXLGXLLXVXFXVXRAGQKGXXPRS*XXX 883
+ K GV SRW K LPR H G + V F V RAGQKG R+
Sbjct: 224 KGKGYKGVTSRWHTKKLPRKTHRGL-RKVACIGAWHPARVAFSVARAGQKGYHHRTEINK 282
Query: 884 KIF 892
KI+
Sbjct: 283 KIY 285
>BC006483-1|AAH06483.1| 403|Homo sapiens ribosomal protein L3,
isoform a protein.
Length = 403
Score = 345 bits (847), Expect = 2e-94
Identities = 162/261 (62%), Positives = 190/261 (72%)
Frame = +1
Query: 34 MSHRKFSAPRHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREP 213
MSHRKFSAPRHGS+GF P+KRS RHRGKVK+FPKDDPSKPVHLTAF+GYKAGMTH+VRE
Sbjct: 1 MSHRKFSAPRHGSLGFLPRKRSSRHRGKVKSFPKDDPSKPVHLTAFLGYKAGMTHIVREV 60
Query: 214 DRPGSKINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYK 393
DRPGSK+NKKE+VEAVTI+ETPPMV VG+VGY+ETP GLR TV+AEH+S++C+RRFYK
Sbjct: 61 DRPGSKVNKKEVVEAVTIVETPPMVVVGIVGYVETPRGLRTFKTVFAEHISDECKRRFYK 120
Query: 394 NWYXXXXXXXXXXXXXWQDELGRKSIEKDFKKMIRYCSVVRVIAHTQMKLLKQRQKKAHI 573
NW+ WQDE G+K +EKDF M +YC V+RVIAHTQM+LL RQKKAH+
Sbjct: 121 NWHKSKKKAFTKYCKKWQDEDGKKQLEKDFSSMKKYCQVIRVIAHTQMRLLPLRQKKAHL 180
Query: 574 MEIQLNGGTSRTK*NGPENIWRNLSLVDSVFAQDEXIDCXGVTKGKGYKXCXFSLGPKEX 753
MEIQ+NGGT K + V+ VF QDE ID GVTKGKGYK K+
Sbjct: 181 MEIQVNGGTVAEKLDWARERLEQQVPVNQVFGQDEMIDVIGVTKGKGYKGVTSRWHTKK- 239
Query: 754 TP*XXXXVLGKLPAFGXWXPS 816
P L K+ G W P+
Sbjct: 240 LPRKTHRGLRKVACIGAWHPA 260
Score = 38.7 bits (86), Expect = 0.028
Identities = 24/63 (38%), Positives = 28/63 (44%)
Frame = +2
Query: 704 RAKDTXGVXSRWXPKXLPRXXHXGS*ESCLXLXLGXLLXVXFXVXRAGQKGXXPRS*XXX 883
+ K GV SRW K LPR H G + V F V RAGQKG R+
Sbjct: 224 KGKGYKGVTSRWHTKKLPRKTHRGL-RKVACIGAWHPARVAFSVARAGQKGYHHRTEINK 282
Query: 884 KIF 892
KI+
Sbjct: 283 KIY 285
>BC002408-1|AAH02408.1| 403|Homo sapiens ribosomal protein L3
protein.
Length = 403
Score = 345 bits (847), Expect = 2e-94
Identities = 162/261 (62%), Positives = 190/261 (72%)
Frame = +1
Query: 34 MSHRKFSAPRHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREP 213
MSHRKFSAPRHGS+GF P+KRS RHRGKVK+FPKDDPSKPVHLTAF+GYKAGMTH+VRE
Sbjct: 1 MSHRKFSAPRHGSLGFLPRKRSSRHRGKVKSFPKDDPSKPVHLTAFLGYKAGMTHIVREV 60
Query: 214 DRPGSKINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYK 393
DRPGSK+NKKE+VEAVTI+ETPPMV VG+VGY+ETP GLR TV+AEH+S++C+RRFYK
Sbjct: 61 DRPGSKVNKKEVVEAVTIVETPPMVVVGIVGYVETPRGLRTFKTVFAEHISDECKRRFYK 120
Query: 394 NWYXXXXXXXXXXXXXWQDELGRKSIEKDFKKMIRYCSVVRVIAHTQMKLLKQRQKKAHI 573
NW+ WQDE G+K +EKDF M +YC V+RVIAHTQM+LL RQKKAH+
Sbjct: 121 NWHKSKKKAFTKYCKKWQDEDGKKQLEKDFSSMKKYCQVIRVIAHTQMRLLPLRQKKAHL 180
Query: 574 MEIQLNGGTSRTK*NGPENIWRNLSLVDSVFAQDEXIDCXGVTKGKGYKXCXFSLGPKEX 753
MEIQ+NGGT K + V+ VF QDE ID GVTKGKGYK K+
Sbjct: 181 MEIQVNGGTVAEKLDWARERLEQQVPVNQVFGQDEMIDVIGVTKGKGYKGVTSRWHTKK- 239
Query: 754 TP*XXXXVLGKLPAFGXWXPS 816
P L K+ G W P+
Sbjct: 240 LPRKTHRGLRKVACIGAWHPA 260
Score = 38.7 bits (86), Expect = 0.028
Identities = 24/63 (38%), Positives = 28/63 (44%)
Frame = +2
Query: 704 RAKDTXGVXSRWXPKXLPRXXHXGS*ESCLXLXLGXLLXVXFXVXRAGQKGXXPRS*XXX 883
+ K GV SRW K LPR H G + V F V RAGQKG R+
Sbjct: 224 KGKGYKGVTSRWHTKKLPRKTHRGL-RKVACIGAWHPARVAFSVARAGQKGYHHRTEINK 282
Query: 884 KIF 892
KI+
Sbjct: 283 KIY 285
>AL022326-1|CAA18450.1| 403|Homo sapiens ribosomal protein L3
protein.
Length = 403
Score = 345 bits (847), Expect = 2e-94
Identities = 162/261 (62%), Positives = 190/261 (72%)
Frame = +1
Query: 34 MSHRKFSAPRHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREP 213
MSHRKFSAPRHGS+GF P+KRS RHRGKVK+FPKDDPSKPVHLTAF+GYKAGMTH+VRE
Sbjct: 1 MSHRKFSAPRHGSLGFLPRKRSSRHRGKVKSFPKDDPSKPVHLTAFLGYKAGMTHIVREV 60
Query: 214 DRPGSKINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYK 393
DRPGSK+NKKE+VEAVTI+ETPPMV VG+VGY+ETP GLR TV+AEH+S++C+RRFYK
Sbjct: 61 DRPGSKVNKKEVVEAVTIVETPPMVVVGIVGYVETPRGLRTFKTVFAEHISDECKRRFYK 120
Query: 394 NWYXXXXXXXXXXXXXWQDELGRKSIEKDFKKMIRYCSVVRVIAHTQMKLLKQRQKKAHI 573
NW+ WQDE G+K +EKDF M +YC V+RVIAHTQM+LL RQKKAH+
Sbjct: 121 NWHKSKKKAFTKYCKKWQDEDGKKQLEKDFSSMKKYCQVIRVIAHTQMRLLPLRQKKAHL 180
Query: 574 MEIQLNGGTSRTK*NGPENIWRNLSLVDSVFAQDEXIDCXGVTKGKGYKXCXFSLGPKEX 753
MEIQ+NGGT K + V+ VF QDE ID GVTKGKGYK K+
Sbjct: 181 MEIQVNGGTVAEKLDWARERLEQQVPVNQVFGQDEMIDVIGVTKGKGYKGVTSRWHTKK- 239
Query: 754 TP*XXXXVLGKLPAFGXWXPS 816
P L K+ G W P+
Sbjct: 240 LPRKTHRGLRKVACIGAWHPA 260
Score = 38.7 bits (86), Expect = 0.028
Identities = 24/63 (38%), Positives = 28/63 (44%)
Frame = +2
Query: 704 RAKDTXGVXSRWXPKXLPRXXHXGS*ESCLXLXLGXLLXVXFXVXRAGQKGXXPRS*XXX 883
+ K GV SRW K LPR H G + V F V RAGQKG R+
Sbjct: 224 KGKGYKGVTSRWHTKKLPRKTHRGL-RKVACIGAWHPARVAFSVARAGQKGYHHRTEINK 282
Query: 884 KIF 892
KI+
Sbjct: 283 KIY 285
>AB062291-1|BAB93474.1| 403|Homo sapiens ribosomal protein L3
protein.
Length = 403
Score = 345 bits (847), Expect = 2e-94
Identities = 162/261 (62%), Positives = 190/261 (72%)
Frame = +1
Query: 34 MSHRKFSAPRHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREP 213
MSHRKFSAPRHGS+GF P+KRS RHRGKVK+FPKDDPSKPVHLTAF+GYKAGMTH+VRE
Sbjct: 1 MSHRKFSAPRHGSLGFLPRKRSSRHRGKVKSFPKDDPSKPVHLTAFLGYKAGMTHIVREV 60
Query: 214 DRPGSKINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYK 393
DRPGSK+NKKE+VEAVTI+ETPPMV VG+VGY+ETP GLR TV+AEH+S++C+RRFYK
Sbjct: 61 DRPGSKVNKKEVVEAVTIVETPPMVVVGIVGYVETPRGLRTFKTVFAEHISDECKRRFYK 120
Query: 394 NWYXXXXXXXXXXXXXWQDELGRKSIEKDFKKMIRYCSVVRVIAHTQMKLLKQRQKKAHI 573
NW+ WQDE G+K +EKDF M +YC V+RVIAHTQM+LL RQKKAH+
Sbjct: 121 NWHKSKKKAFTKYCKKWQDEDGKKQLEKDFSSMKKYCQVIRVIAHTQMRLLPLRQKKAHL 180
Query: 574 MEIQLNGGTSRTK*NGPENIWRNLSLVDSVFAQDEXIDCXGVTKGKGYKXCXFSLGPKEX 753
MEIQ+NGGT K + V+ VF QDE ID GVTKGKGYK K+
Sbjct: 181 MEIQVNGGTVAEKLDWARERLEQQVPVNQVFGQDEMIDVIGVTKGKGYKGVTSRWHTKK- 239
Query: 754 TP*XXXXVLGKLPAFGXWXPS 816
P L K+ G W P+
Sbjct: 240 LPRKTHRGLRKVACIGAWHPA 260
Score = 38.7 bits (86), Expect = 0.028
Identities = 24/63 (38%), Positives = 28/63 (44%)
Frame = +2
Query: 704 RAKDTXGVXSRWXPKXLPRXXHXGS*ESCLXLXLGXLLXVXFXVXRAGQKGXXPRS*XXX 883
+ K GV SRW K LPR H G + V F V RAGQKG R+
Sbjct: 224 KGKGYKGVTSRWHTKKLPRKTHRGL-RKVACIGAWHPARVAFSVARAGQKGYHHRTEINK 282
Query: 884 KIF 892
KI+
Sbjct: 283 KIY 285
>L22453-1|AAA91344.1| 277|Homo sapiens TARBP-b protein.
Length = 277
Score = 343 bits (843), Expect = 5e-94
Identities = 161/260 (61%), Positives = 189/260 (72%)
Frame = +1
Query: 34 MSHRKFSAPRHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREP 213
MSHRKFSAPRHGS+GF P+KR+ RHRGKVK+FPKDDPSKPVHLTAF+GYKAGMTH+VRE
Sbjct: 1 MSHRKFSAPRHGSLGFLPRKRTSRHRGKVKSFPKDDPSKPVHLTAFLGYKAGMTHIVREV 60
Query: 214 DRPGSKINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYK 393
DRPGSK+NKKE+VEAVTI+ETPPMV VG+VGY+ETP GLR TV+AEH+S++C+RRFYK
Sbjct: 61 DRPGSKVNKKEVVEAVTIVETPPMVVVGIVGYVETPRGLRTFKTVFAEHISDECKRRFYK 120
Query: 394 NWYXXXXXXXXXXXXXWQDELGRKSIEKDFKKMIRYCSVVRVIAHTQMKLLKQRQKKAHI 573
NW+ WQDE G+K +EKDF M +YC V+RVIAHTQM+LL RQKKAH+
Sbjct: 121 NWHKSKKKAFTKYCKKWQDEDGKKQLEKDFSSMKKYCQVIRVIAHTQMRLLPLRQKKAHL 180
Query: 574 MEIQLNGGTSRTK*NGPENIWRNLSLVDSVFAQDEXIDCXGVTKGKGYKXCXFSLGPKEX 753
MEIQ+NGGT K + V+ VF QDE ID GVTKGKGYK K+
Sbjct: 181 MEIQVNGGTVAEKLDWARERLEQQVPVNQVFGQDEMIDVIGVTKGKGYKGVTSRWHTKK- 239
Query: 754 TP*XXXXVLGKLPAFGXWXP 813
P L K+ G W P
Sbjct: 240 LPRKTHRGLRKVACIGAWHP 259
Score = 37.1 bits (82), Expect = 0.086
Identities = 22/55 (40%), Positives = 25/55 (45%)
Frame = +2
Query: 704 RAKDTXGVXSRWXPKXLPRXXHXGS*ESCLXLXLGXLLXVXFXVXRAGQKGXXPR 868
+ K GV SRW K LPR H G + + V F V RAGQKG R
Sbjct: 224 KGKGYKGVTSRWHTKKLPRKTHRGL-RKVACIGAWHPVRVAFSVARAGQKGYHHR 277
>M90054-1|AAA60291.1| 398|Homo sapiens ribosomal protein L3
protein.
Length = 398
Score = 334 bits (820), Expect = 3e-91
Identities = 157/256 (61%), Positives = 185/256 (72%)
Frame = +1
Query: 49 FSAPRHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDRPGS 228
FSAPRHGS+GF P+KRS RHRGKVK+FPKDDPSKPVHLTAF+GYKAGMTH+VRE DRPGS
Sbjct: 1 FSAPRHGSLGFLPRKRSSRHRGKVKSFPKDDPSKPVHLTAFLGYKAGMTHIVREVDRPGS 60
Query: 229 KINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYKNWYXX 408
K+NKKE+VEAVTI+ETPPMV VG+VGY+ETP GLR TV+AEH+S++C+RRFYKNW+
Sbjct: 61 KVNKKEVVEAVTIVETPPMVVVGIVGYVETPRGLRTFKTVFAEHISDECKRRFYKNWHKS 120
Query: 409 XXXXXXXXXXXWQDELGRKSIEKDFKKMIRYCSVVRVIAHTQMKLLKQRQKKAHIMEIQL 588
WQDE G+K +EKDF M +YC V+RVIAHTQM+LL RQKKAH+MEIQ+
Sbjct: 121 KKKAFTKYCKKWQDEDGKKQLEKDFSSMKKYCQVIRVIAHTQMRLLPLRQKKAHLMEIQV 180
Query: 589 NGGTSRTK*NGPENIWRNLSLVDSVFAQDEXIDCXGVTKGKGYKXCXFSLGPKEXTP*XX 768
NGGT K + V+ VF QDE ID GVTKGKGYK K+ P
Sbjct: 181 NGGTVAEKLDWARERLEQQVPVNQVFGQDEMIDVIGVTKGKGYKGVTSRWHTKK-LPRKT 239
Query: 769 XXVLGKLPAFGXWXPS 816
L K+ G W P+
Sbjct: 240 HRGLRKVACIGAWHPA 255
Score = 38.7 bits (86), Expect = 0.028
Identities = 24/63 (38%), Positives = 28/63 (44%)
Frame = +2
Query: 704 RAKDTXGVXSRWXPKXLPRXXHXGS*ESCLXLXLGXLLXVXFXVXRAGQKGXXPRS*XXX 883
+ K GV SRW K LPR H G + V F V RAGQKG R+
Sbjct: 219 KGKGYKGVTSRWHTKKLPRKTHRGL-RKVACIGAWHPARVAFSVARAGQKGYHHRTEINK 277
Query: 884 KIF 892
KI+
Sbjct: 278 KIY 280
>U65581-1|AAC50777.1| 407|Homo sapiens ribosomal protein L3-like
protein.
Length = 407
Score = 306 bits (751), Expect = 7e-83
Identities = 148/261 (56%), Positives = 179/261 (68%)
Frame = +1
Query: 34 MSHRKFSAPRHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREP 213
MSHRKFSAPRHG +GF P KRS RHRGKVK +P+DDPS+PVHLTAF+GYKAGMTH +RE
Sbjct: 1 MSHRKFSAPRHGHLGFLPHKRSHRHRGKVKTWPRDDPSQPVHLTAFLGYKAGMTHTLREV 60
Query: 214 DRPGSKINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYK 393
RPG KI+K+E VEAVTI+ETPP+V VGVVGY+ TP GLR+ T++AEH+S++CRRRFYK
Sbjct: 61 HRPGLKISKREEVEAVTIVETPPLVVVGVVGYVATPRGLRSFKTIFAEHLSDECRRRFYK 120
Query: 394 NWYXXXXXXXXXXXXXWQDELGRKSIEKDFKKMIRYCSVVRVIAHTQMKLLKQRQKKAHI 573
+W+ W+D G+K ++KDF M +YC V+RVI HTQMKLL RQKKAHI
Sbjct: 121 DWHKSKKKAFTKACKRWRDTDGKKQLQKDFAAMKKYCKVIRVIVHTQMKLLPFRQKKAHI 180
Query: 574 MEIQLNGGTSRTK*NGPENIWRNLSLVDSVFAQDEXIDCXGVTKGKGYKXCXFSLGPKEX 753
MEIQLNGGT K + V SVF+Q E ID VTKG+G K K+
Sbjct: 181 MEIQLNGGTVAEKVAWAQARLEKQVPVHSVFSQSEVIDVIAVTKGRGVKGVTSRWHTKK- 239
Query: 754 TP*XXXXVLGKLPAFGXWXPS 816
P L K+ G W P+
Sbjct: 240 LPRKTHKGLRKVACIGAWHPA 260
Score = 35.9 bits (79), Expect = 0.20
Identities = 22/63 (34%), Positives = 27/63 (42%)
Frame = +2
Query: 704 RAKDTXGVXSRWXPKXLPRXXHXGS*ESCLXLXLGXLLXVXFXVXRAGQKGXXPRS*XXX 883
+ + GV SRW K LPR H G + V + RAGQKG R+
Sbjct: 224 KGRGVKGVTSRWHTKKLPRKTHKGL-RKVACIGAWHPARVGCSIARAGQKGYHHRTELNK 282
Query: 884 KIF 892
KIF
Sbjct: 283 KIF 285
>BC050413-1|AAH50413.1| 407|Homo sapiens ribosomal protein L3-like
protein.
Length = 407
Score = 306 bits (751), Expect = 7e-83
Identities = 148/261 (56%), Positives = 179/261 (68%)
Frame = +1
Query: 34 MSHRKFSAPRHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREP 213
MSHRKFSAPRHG +GF P KRS RHRGKVK +P+DDPS+PVHLTAF+GYKAGMTH +RE
Sbjct: 1 MSHRKFSAPRHGHLGFLPHKRSHRHRGKVKTWPRDDPSQPVHLTAFLGYKAGMTHTLREV 60
Query: 214 DRPGSKINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYK 393
RPG KI+K+E VEAVTI+ETPP+V VGVVGY+ TP GLR+ T++AEH+S++CRRRFYK
Sbjct: 61 HRPGLKISKREEVEAVTIVETPPLVVVGVVGYVATPRGLRSFKTIFAEHLSDECRRRFYK 120
Query: 394 NWYXXXXXXXXXXXXXWQDELGRKSIEKDFKKMIRYCSVVRVIAHTQMKLLKQRQKKAHI 573
+W+ W+D G+K ++KDF M +YC V+RVI HTQMKLL RQKKAHI
Sbjct: 121 DWHKSKKKAFTKACKRWRDTDGKKQLQKDFAAMKKYCKVIRVIVHTQMKLLPFRQKKAHI 180
Query: 574 MEIQLNGGTSRTK*NGPENIWRNLSLVDSVFAQDEXIDCXGVTKGKGYKXCXFSLGPKEX 753
MEIQLNGGT K + V SVF+Q E ID VTKG+G K K+
Sbjct: 181 MEIQLNGGTVAEKVAWAQARLEKQVPVHSVFSQSEVIDVIAVTKGRGVKGVTSRWHTKK- 239
Query: 754 TP*XXXXVLGKLPAFGXWXPS 816
P L K+ G W P+
Sbjct: 240 LPRKTHKGLRKVACIGAWHPA 260
Score = 35.9 bits (79), Expect = 0.20
Identities = 22/63 (34%), Positives = 27/63 (42%)
Frame = +2
Query: 704 RAKDTXGVXSRWXPKXLPRXXHXGS*ESCLXLXLGXLLXVXFXVXRAGQKGXXPRS*XXX 883
+ + GV SRW K LPR H G + V + RAGQKG R+
Sbjct: 224 KGRGVKGVTSRWHTKKLPRKTHKGL-RKVACIGAWHPARVGCSIARAGQKGYHHRTELNK 282
Query: 884 KIF 892
KIF
Sbjct: 283 KIF 285
>AE006640-5|AAK61301.1| 406|Homo sapiens 60S ribosomal protein L3
like protein.
Length = 406
Score = 304 bits (746), Expect = 3e-82
Identities = 147/260 (56%), Positives = 178/260 (68%)
Frame = +1
Query: 37 SHRKFSAPRHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPD 216
SHRKFSAPRHG +GF P KRS RHRGKVK +P+DDPS+PVHLTAF+GYKAGMTH +RE
Sbjct: 1 SHRKFSAPRHGHLGFLPHKRSHRHRGKVKTWPRDDPSQPVHLTAFLGYKAGMTHTLREVH 60
Query: 217 RPGSKINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYKN 396
RPG KI+K+E VEAVTI+ETPP+V VGVVGY+ TP GLR+ T++AEH+S++CRRRFYK+
Sbjct: 61 RPGLKISKREEVEAVTIVETPPLVVVGVVGYVATPRGLRSFKTIFAEHLSDECRRRFYKD 120
Query: 397 WYXXXXXXXXXXXXXWQDELGRKSIEKDFKKMIRYCSVVRVIAHTQMKLLKQRQKKAHIM 576
W+ W+D G+K ++KDF M +YC V+RVI HTQMKLL RQKKAHIM
Sbjct: 121 WHKSKKKAFTKACKRWRDTDGKKQLQKDFAAMKKYCKVIRVIVHTQMKLLPFRQKKAHIM 180
Query: 577 EIQLNGGTSRTK*NGPENIWRNLSLVDSVFAQDEXIDCXGVTKGKGYKXCXFSLGPKEXT 756
EIQLNGGT K + V SVF+Q E ID VTKG+G K K+
Sbjct: 181 EIQLNGGTVAEKVAWAQARLEKQVPVHSVFSQSEVIDVIAVTKGRGVKGVTSRWHTKK-L 239
Query: 757 P*XXXXVLGKLPAFGXWXPS 816
P L K+ G W P+
Sbjct: 240 PRKTHKGLRKVACIGAWHPA 259
Score = 35.9 bits (79), Expect = 0.20
Identities = 22/63 (34%), Positives = 27/63 (42%)
Frame = +2
Query: 704 RAKDTXGVXSRWXPKXLPRXXHXGS*ESCLXLXLGXLLXVXFXVXRAGQKGXXPRS*XXX 883
+ + GV SRW K LPR H G + V + RAGQKG R+
Sbjct: 223 KGRGVKGVTSRWHTKKLPRKTHKGL-RKVACIGAWHPARVGCSIARAGQKGYHHRTELNK 281
Query: 884 KIF 892
KIF
Sbjct: 282 KIF 284
>BC022790-1|AAH22790.1| 374|Homo sapiens Unknown (protein for
IMAGE:3538792) protein.
Length = 374
Score = 289 bits (708), Expect = 1e-77
Identities = 137/232 (59%), Positives = 163/232 (70%)
Frame = +1
Query: 121 KAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDRPGSKINKKEIVEAVTIIETPPMVCVGV 300
K+FPKDDPSKPVHLTAF+GYKAGMTH+VRE DRPGSK+NKKE+VEAVTI+ETPPMV VG+
Sbjct: 1 KSFPKDDPSKPVHLTAFLGYKAGMTHIVREVDRPGSKVNKKEVVEAVTIVETPPMVVVGI 60
Query: 301 VGYIETPHGLRALLTVWAEHMSEDCRRRFYKNWYXXXXXXXXXXXXXWQDELGRKSIEKD 480
VGY+ETP GLR TV+AEH+S++C+RRFYKNW+ WQDE G+K +EKD
Sbjct: 61 VGYVETPRGLRTFKTVFAEHISDECKRRFYKNWHKSKKKAFTKYCKKWQDEDGKKQLEKD 120
Query: 481 FKKMIRYCSVVRVIAHTQMKLLKQRQKKAHIMEIQLNGGTSRTK*NGPENIWRNLSLVDS 660
F M +YC V+RVIAHTQM+LL RQKKAH+MEIQ+NGGT K + V+
Sbjct: 121 FSSMKKYCQVIRVIAHTQMRLLPLRQKKAHLMEIQVNGGTVAEKLDWARERLEQQVPVNQ 180
Query: 661 VFAQDEXIDCXGVTKGKGYKXCXFSLGPKEXTP*XXXXVLGKLPAFGXWXPS 816
VF QDE ID GVTKGKGYK K+ P L K+ G W P+
Sbjct: 181 VFGQDEMIDVIGVTKGKGYKGVTSRWHTKK-LPRKTHRGLRKVACIGAWHPA 231
Score = 38.7 bits (86), Expect = 0.028
Identities = 24/63 (38%), Positives = 28/63 (44%)
Frame = +2
Query: 704 RAKDTXGVXSRWXPKXLPRXXHXGS*ESCLXLXLGXLLXVXFXVXRAGQKGXXPRS*XXX 883
+ K GV SRW K LPR H G + V F V RAGQKG R+
Sbjct: 195 KGKGYKGVTSRWHTKKLPRKTHRGL-RKVACIGAWHPARVAFSVARAGQKGYHHRTEINK 253
Query: 884 KIF 892
KI+
Sbjct: 254 KIY 256
>AJ238852-1|CAB76201.1| 343|Homo sapiens ribosomal protein L3
protein.
Length = 343
Score = 233 bits (570), Expect = 6e-61
Identities = 113/206 (54%), Positives = 137/206 (66%)
Frame = +1
Query: 199 VVREPDRPGSKINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCR 378
+VRE DRPGSK+NKKE+VEAVTI+ETPPMV VG+VGY+ETP GLR TV+AEH+S++C+
Sbjct: 1 IVREVDRPGSKVNKKEVVEAVTIVETPPMVVVGIVGYVETPRGLRTFKTVFAEHISDECK 60
Query: 379 RRFYKNWYXXXXXXXXXXXXXWQDELGRKSIEKDFKKMIRYCSVVRVIAHTQMKLLKQRQ 558
RRFYKNW+ WQDE G+K +EKDF M +YC V+RVIAHTQM+LL RQ
Sbjct: 61 RRFYKNWHKSKKKAFTKYCKKWQDEDGKKQLEKDFSSMKKYCQVIRVIAHTQMRLLPLRQ 120
Query: 559 KKAHIMEIQLNGGTSRTK*NGPENIWRNLSLVDSVFAQDEXIDCXGVTKGKGYKXCXFSL 738
KKAH+MEIQ+NGGT K + V+ VF QDE ID GVTKGKGYK
Sbjct: 121 KKAHLMEIQVNGGTVAEKLDWARERLEQQVPVNQVFGQDEMIDVIGVTKGKGYKGVTSRW 180
Query: 739 GPKEXTP*XXXXVLGKLPAFGXWXPS 816
K+ P L K+ G W P+
Sbjct: 181 HTKK-LPRKTHRGLRKVACIGAWHPA 205
Score = 38.7 bits (86), Expect = 0.028
Identities = 24/63 (38%), Positives = 28/63 (44%)
Frame = +2
Query: 704 RAKDTXGVXSRWXPKXLPRXXHXGS*ESCLXLXLGXLLXVXFXVXRAGQKGXXPRS*XXX 883
+ K GV SRW K LPR H G + V F V RAGQKG R+
Sbjct: 169 KGKGYKGVTSRWHTKKLPRKTHRGL-RKVACIGAWHPARVAFSVARAGQKGYHHRTEINK 227
Query: 884 KIF 892
KI+
Sbjct: 228 KIY 230
>BC004323-1|AAH04323.2| 292|Homo sapiens RPL3 protein protein.
Length = 292
Score = 140 bits (339), Expect = 6e-33
Identities = 71/150 (47%), Positives = 87/150 (58%)
Frame = +1
Query: 367 EDCRRRFYKNWYXXXXXXXXXXXXXWQDELGRKSIEKDFKKMIRYCSVVRVIAHTQMKLL 546
++C+RRFYKNW+ WQDE G+K +EKDF M +YC V+RVIAHTQM+LL
Sbjct: 1 DECKRRFYKNWHKSKKKAFTKYCKKWQDEDGKKQLEKDFSSMKKYCQVIRVIAHTQMRLL 60
Query: 547 KQRQKKAHIMEIQLNGGTSRTK*NGPENIWRNLSLVDSVFAQDEXIDCXGVTKGKGYKXC 726
RQKKAH+MEIQ+NGGT K + V+ VF QDE ID GVTKGKGYK
Sbjct: 61 PLRQKKAHLMEIQVNGGTVAEKLDWARERLEQQVPVNQVFGQDEMIDVIGVTKGKGYKGV 120
Query: 727 XFSLGPKEXTP*XXXXVLGKLPAFGXWXPS 816
K+ P L K+ G W P+
Sbjct: 121 TSRWHTKK-LPRKTHRGLRKVACIGAWHPA 149
Score = 38.7 bits (86), Expect = 0.028
Identities = 24/63 (38%), Positives = 28/63 (44%)
Frame = +2
Query: 704 RAKDTXGVXSRWXPKXLPRXXHXGS*ESCLXLXLGXLLXVXFXVXRAGQKGXXPRS*XXX 883
+ K GV SRW K LPR H G + V F V RAGQKG R+
Sbjct: 113 KGKGYKGVTSRWHTKKLPRKTHRGL-RKVACIGAWHPARVAFSVARAGQKGYHHRTEINK 171
Query: 884 KIF 892
KI+
Sbjct: 172 KIY 174
>BC036582-1|AAH36582.1| 251|Homo sapiens RPL3 protein protein.
Length = 251
Score = 96.7 bits (230), Expect = 1e-19
Identities = 53/109 (48%), Positives = 63/109 (57%)
Frame = +1
Query: 490 MIRYCSVVRVIAHTQMKLLKQRQKKAHIMEIQLNGGTSRTK*NGPENIWRNLSLVDSVFA 669
M +YC V+RVIAHTQM+LL RQKKAH+MEIQ+NGGT K + V+ VF
Sbjct: 1 MKKYCQVIRVIAHTQMRLLPLRQKKAHLMEIQVNGGTVAEKLDWARERLEQQVPVNQVFG 60
Query: 670 QDEXIDCXGVTKGKGYKXCXFSLGPKEXTP*XXXXVLGKLPAFGXWXPS 816
QDE ID GVTKGKGYK K+ P L K+ G W P+
Sbjct: 61 QDEMIDVIGVTKGKGYKGVTSRWHTKK-LPRKTHRGLRKVACIGAWHPA 108
Score = 38.7 bits (86), Expect = 0.028
Identities = 24/63 (38%), Positives = 28/63 (44%)
Frame = +2
Query: 704 RAKDTXGVXSRWXPKXLPRXXHXGS*ESCLXLXLGXLLXVXFXVXRAGQKGXXPRS*XXX 883
+ K GV SRW K LPR H G + V F V RAGQKG R+
Sbjct: 72 KGKGYKGVTSRWHTKKLPRKTHRGL-RKVACIGAWHPARVAFSVARAGQKGYHHRTEINK 130
Query: 884 KIF 892
KI+
Sbjct: 131 KIY 133
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 122,093,551
Number of Sequences: 237096
Number of extensions: 2668508
Number of successful extensions: 4657
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 4404
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4602
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11492727354
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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