Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP03_FL5_K05
(884 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X55019-1|CAA38759.1| 517|Homo sapiens acetylcholine receptor de... 33 1.0
BC093925-1|AAH93925.1| 517|Homo sapiens cholinergic receptor, n... 33 1.0
BC093923-1|AAH93923.1| 517|Homo sapiens cholinergic receptor, n... 33 1.0
AC092165-2|AAY24102.1| 517|Homo sapiens unknown protein. 33 1.0
M86383-1|AAC84176.1| 502|Homo sapiens nicotinic acetylcholine r... 33 1.8
Y08418-1|CAA69695.1| 503|Homo sapiens nicotinic acetylcholine r... 32 3.2
Y00762-1|CAA68731.1| 457|Homo sapiens protein ( Human mRNA for ... 32 3.2
X53559-1|CAA37625.1| 474|Homo sapiens neuronal nicotinic acetyl... 32 3.2
X02502-1|CAA26344.1| 457|Homo sapiens acetylcholine receptor pr... 32 3.2
U62432-1|AAB40110.1| 504|Homo sapiens nicotinic acetylcholine r... 32 3.2
S77094-1|AAD14247.1| 457|Homo sapiens nicotinic acetylcholine r... 32 3.2
M37981-1|AAA59942.1| 503|Homo sapiens neuronal nicotinic acetyl... 32 3.2
BT006897-1|AAP35543.1| 505|Homo sapiens cholinergic receptor, n... 32 3.2
BT006646-1|AAP35292.1| 489|Homo sapiens cholinergic receptor, n... 32 3.2
BC098443-1|AAH98443.1| 504|Homo sapiens cholinergic receptor, n... 32 3.2
BC006314-1|AAH06314.1| 269|Homo sapiens CHRNA1 protein protein. 32 3.2
BC006114-1|AAH06114.1| 489|Homo sapiens CHRNA3 protein protein. 32 3.2
BC002996-1|AAH02996.1| 505|Homo sapiens cholinergic receptor, n... 32 3.2
BC001642-1|AAH01642.1| 505|Homo sapiens cholinergic receptor, n... 32 3.2
BC000513-1|AAH00513.1| 505|Homo sapiens cholinergic receptor, n... 32 3.2
AJ007783-1|CAA07682.1| 504|Homo sapiens nicotinic acetylcholine... 32 3.2
AF385584-1|AAK68110.1| 489|Homo sapiens nicotinic cholinergic r... 32 3.2
AC018890-1|AAY14687.1| 457|Homo sapiens unknown protein. 32 3.2
Y08416-1|CAA69693.1| 498|Homo sapiens nicotinic acetylcholine r... 31 5.6
U62439-1|AAB40117.1| 498|Homo sapiens nicotinic acetylcholine r... 31 5.6
U48861-1|AAA92123.1| 498|Homo sapiens beta 4 nicotinic acetylch... 31 5.6
BC096083-1|AAH96083.1| 198|Homo sapiens CHRNB4 protein protein. 31 5.6
BC096082-1|AAH96082.1| 498|Homo sapiens cholinergic receptor, n... 31 5.6
BC096081-1|AAH96081.1| 198|Homo sapiens CHRNB4 protein protein. 31 5.6
BC096080-1|AAH96080.1| 498|Homo sapiens cholinergic receptor, n... 31 5.6
AJ306454-1|CAC34819.1| 497|Homo sapiens neuronal nicotinic acet... 31 5.6
AF306329-1|AAL02062.1| 498|Homo sapiens neuronal nicotinic acet... 31 5.6
X01715-1|CAA25861.1| 520|Homo sapiens acetylcholine receptor ga... 31 7.3
L08485-1|AAA58490.1| 462|Homo sapiens GABA-benzodiazepine recep... 31 7.3
BT009830-1|AAP88832.1| 462|Homo sapiens gamma-aminobutyric acid... 31 7.3
BC113422-1|AAI13423.1| 462|Homo sapiens gamma-aminobutyric acid... 31 7.3
BC111979-1|AAI11980.1| 462|Homo sapiens gamma-aminobutyric acid... 31 7.3
BC111802-1|AAI11803.1| 465|Homo sapiens CHRNG protein protein. 31 7.3
AC092165-3|AAY24103.1| 520|Homo sapiens unknown protein. 31 7.3
Y16281-1|CAA76154.1| 529|Homo sapiens nicotinic acetylcholine r... 30 9.7
Y08421-1|CAA69698.1| 627|Homo sapiens nicotinic acetylcholine r... 30 9.7
X89741-1|CAA61893.1| 627|Homo sapiens neuronal acetylcholine re... 30 9.7
X87629-1|CAA60959.1| 602|Homo sapiens nicotinic acetylcholine r... 30 9.7
U62433-1|AAB40111.1| 627|Homo sapiens nicotinic acetylcholine r... 30 9.7
U62431-1|AAB40109.1| 529|Homo sapiens nicotinic acetylcholine r... 30 9.7
L35901-1|AAA64743.1| 627|Homo sapiens nicotinic acetylcholine r... 30 9.7
DQ093071-1|AAY88737.1| 627|Homo sapiens cholinergic receptor, n... 30 9.7
BC096290-1|AAH96290.1| 627|Homo sapiens cholinergic receptor, n... 30 9.7
>X55019-1|CAA38759.1| 517|Homo sapiens acetylcholine receptor delta
subunit protein.
Length = 517
Score = 33.5 bits (73), Expect = 1.0
Identities = 16/48 (33%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
Frame = +1
Query: 166 DSKIVVNLTLHLRHA-NIRESESTVRIQADLQMNWIDKRLSWNAGEWG 306
+ + V L L L + +++E E T+ ++ W D RL WNA E+G
Sbjct: 49 EESVDVALALTLSNLISLKEVEETLTTNVWIEHGWTDNRLKWNAEEFG 96
>BC093925-1|AAH93925.1| 517|Homo sapiens cholinergic receptor,
nicotinic, delta protein.
Length = 517
Score = 33.5 bits (73), Expect = 1.0
Identities = 16/48 (33%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
Frame = +1
Query: 166 DSKIVVNLTLHLRHA-NIRESESTVRIQADLQMNWIDKRLSWNAGEWG 306
+ + V L L L + +++E E T+ ++ W D RL WNA E+G
Sbjct: 49 EESVDVALALTLSNLISLKEVEETLTTNVWIEHGWTDNRLKWNAEEFG 96
>BC093923-1|AAH93923.1| 517|Homo sapiens cholinergic receptor,
nicotinic, delta protein.
Length = 517
Score = 33.5 bits (73), Expect = 1.0
Identities = 16/48 (33%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
Frame = +1
Query: 166 DSKIVVNLTLHLRHA-NIRESESTVRIQADLQMNWIDKRLSWNAGEWG 306
+ + V L L L + +++E E T+ ++ W D RL WNA E+G
Sbjct: 49 EESVDVALALTLSNLISLKEVEETLTTNVWIEHGWTDNRLKWNAEEFG 96
>AC092165-2|AAY24102.1| 517|Homo sapiens unknown protein.
Length = 517
Score = 33.5 bits (73), Expect = 1.0
Identities = 16/48 (33%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
Frame = +1
Query: 166 DSKIVVNLTLHLRHA-NIRESESTVRIQADLQMNWIDKRLSWNAGEWG 306
+ + V L L L + +++E E T+ ++ W D RL WNA E+G
Sbjct: 49 EESVDVALALTLSNLISLKEVEETLTTNVWIEHGWTDNRLKWNAEEFG 96
>M86383-1|AAC84176.1| 502|Homo sapiens nicotinic acetylcholine
receptor alpha 3 subunit precursor protein.
Length = 502
Score = 32.7 bits (71), Expect = 1.8
Identities = 18/51 (35%), Positives = 27/51 (52%), Gaps = 4/51 (7%)
Frame = +2
Query: 296 GSGAAXLGWCPRERLWRPDXVLLNAAATTAGDYAL----RARVSNTGSVSW 436
G G A P +++W+PD VL N A GD+ + +A + TG V+W
Sbjct: 99 GYGGAEFMRVPAQKIWKPDIVLYNNA---VGDFQVTTKTKALLKYTGEVTW 146
>Y08418-1|CAA69695.1| 503|Homo sapiens nicotinic acetylcholine
receptor alpha3 subunit precursor protein.
Length = 503
Score = 31.9 bits (69), Expect = 3.2
Identities = 16/46 (34%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Frame = +2
Query: 302 GAAXLGWCPRERLWRPDXVLL-NAAATTAGDYALRARVSNTGSVSW 436
G A P +++W+PD VL NA D +A + TG V+W
Sbjct: 102 GGAEFMRVPAQKIWKPDIVLYNNAVGDFQVDDKTKALLKYTGEVTW 147
>Y00762-1|CAA68731.1| 457|Homo sapiens protein ( Human mRNA for
muscle acetylcholine receptor alpha-subunit. ).
Length = 457
Score = 31.9 bits (69), Expect = 3.2
Identities = 16/41 (39%), Positives = 24/41 (58%), Gaps = 4/41 (9%)
Frame = +2
Query: 326 PRERLWRPDXVLLNAAATTAGDYAL----RARVSNTGSVSW 436
P E++WRPD VL N A GD+A+ + + TG ++W
Sbjct: 101 PSEKIWRPDLVLYNNA---DGDFAIVKFTKVLLQYTGHITW 138
>X53559-1|CAA37625.1| 474|Homo sapiens neuronal nicotinic
acetylcholine receptor alpha-3merase protein.
Length = 474
Score = 31.9 bits (69), Expect = 3.2
Identities = 16/46 (34%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Frame = +2
Query: 302 GAAXLGWCPRERLWRPDXVLL-NAAATTAGDYALRARVSNTGSVSW 436
G A P +++W+PD VL NA D +A + TG V+W
Sbjct: 73 GGAEFMRVPAQKIWKPDIVLYNNAVGDFQVDDKTKALLKYTGEVTW 118
>X02502-1|CAA26344.1| 457|Homo sapiens acetylcholine receptor
protein.
Length = 457
Score = 31.9 bits (69), Expect = 3.2
Identities = 16/41 (39%), Positives = 24/41 (58%), Gaps = 4/41 (9%)
Frame = +2
Query: 326 PRERLWRPDXVLLNAAATTAGDYAL----RARVSNTGSVSW 436
P E++WRPD VL N A GD+A+ + + TG ++W
Sbjct: 101 PSEKIWRPDLVLYNNA---DGDFAIVKFTKVLLQYTGHITW 138
>U62432-1|AAB40110.1| 504|Homo sapiens nicotinic acetylcholine
receptor alpha3 subunit precursor protein.
Length = 504
Score = 31.9 bits (69), Expect = 3.2
Identities = 16/46 (34%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Frame = +2
Query: 302 GAAXLGWCPRERLWRPDXVLL-NAAATTAGDYALRARVSNTGSVSW 436
G A P +++W+PD VL NA D +A + TG V+W
Sbjct: 103 GGAEFMRVPAQKIWKPDIVLYNNAVGDFQVDDKTKALLKYTGEVTW 148
>S77094-1|AAD14247.1| 457|Homo sapiens nicotinic acetylcholine
receptor alpha subunit|AChR protein.
Length = 457
Score = 31.9 bits (69), Expect = 3.2
Identities = 16/41 (39%), Positives = 24/41 (58%), Gaps = 4/41 (9%)
Frame = +2
Query: 326 PRERLWRPDXVLLNAAATTAGDYAL----RARVSNTGSVSW 436
P E++WRPD VL N A GD+A+ + + TG ++W
Sbjct: 101 PSEKIWRPDLVLYNNA---DGDFAIVKFTKVLLQYTGHITW 138
>M37981-1|AAA59942.1| 503|Homo sapiens neuronal nicotinic
acetylcholine receptor protein.
Length = 503
Score = 31.9 bits (69), Expect = 3.2
Identities = 16/46 (34%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Frame = +2
Query: 302 GAAXLGWCPRERLWRPDXVLL-NAAATTAGDYALRARVSNTGSVSW 436
G A P +++W+PD VL NA D +A + TG V+W
Sbjct: 102 GGAEFMRVPAQKIWKPDIVLYNNAVGDFQVDDKTKALLKYTGEVTW 147
>BT006897-1|AAP35543.1| 505|Homo sapiens cholinergic receptor,
nicotinic, alpha polypeptide 3 protein.
Length = 505
Score = 31.9 bits (69), Expect = 3.2
Identities = 16/46 (34%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Frame = +2
Query: 302 GAAXLGWCPRERLWRPDXVLL-NAAATTAGDYALRARVSNTGSVSW 436
G A P +++W+PD VL NA D +A + TG V+W
Sbjct: 104 GGAEFMRVPAQKIWKPDIVLYNNAVGDFQVDDKTKALLKYTGEVTW 149
>BT006646-1|AAP35292.1| 489|Homo sapiens cholinergic receptor,
nicotinic, alpha polypeptide 3 protein.
Length = 489
Score = 31.9 bits (69), Expect = 3.2
Identities = 16/46 (34%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Frame = +2
Query: 302 GAAXLGWCPRERLWRPDXVLL-NAAATTAGDYALRARVSNTGSVSW 436
G A P +++W+PD VL NA D +A + TG V+W
Sbjct: 104 GGAEFMRVPAQKIWKPDIVLYNNAVGDFQVDDKTKALLKYTGEVTW 149
>BC098443-1|AAH98443.1| 504|Homo sapiens cholinergic receptor,
nicotinic, alpha 3 protein.
Length = 504
Score = 31.9 bits (69), Expect = 3.2
Identities = 16/46 (34%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Frame = +2
Query: 302 GAAXLGWCPRERLWRPDXVLL-NAAATTAGDYALRARVSNTGSVSW 436
G A P +++W+PD VL NA D +A + TG V+W
Sbjct: 103 GGAEFMRVPAQKIWKPDIVLYNNAVGDFQVDDKTKALLKYTGEVTW 148
>BC006314-1|AAH06314.1| 269|Homo sapiens CHRNA1 protein protein.
Length = 269
Score = 31.9 bits (69), Expect = 3.2
Identities = 16/41 (39%), Positives = 24/41 (58%), Gaps = 4/41 (9%)
Frame = +2
Query: 326 PRERLWRPDXVLLNAAATTAGDYAL----RARVSNTGSVSW 436
P E++WRPD VL N A GD+A+ + + TG ++W
Sbjct: 101 PSEKIWRPDLVLYNNA---DGDFAIVKFTKVLLQYTGHITW 138
>BC006114-1|AAH06114.1| 489|Homo sapiens CHRNA3 protein protein.
Length = 489
Score = 31.9 bits (69), Expect = 3.2
Identities = 16/46 (34%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Frame = +2
Query: 302 GAAXLGWCPRERLWRPDXVLL-NAAATTAGDYALRARVSNTGSVSW 436
G A P +++W+PD VL NA D +A + TG V+W
Sbjct: 104 GGAEFMRVPAQKIWKPDIVLYNNAVGDFQVDDKTKALLKYTGEVTW 149
>BC002996-1|AAH02996.1| 505|Homo sapiens cholinergic receptor,
nicotinic, alpha 3 protein.
Length = 505
Score = 31.9 bits (69), Expect = 3.2
Identities = 16/46 (34%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Frame = +2
Query: 302 GAAXLGWCPRERLWRPDXVLL-NAAATTAGDYALRARVSNTGSVSW 436
G A P +++W+PD VL NA D +A + TG V+W
Sbjct: 104 GGAEFMRVPAQKIWKPDIVLYNNAVGDFQVDDKTKALLKYTGEVTW 149
>BC001642-1|AAH01642.1| 505|Homo sapiens cholinergic receptor,
nicotinic, alpha 3 protein.
Length = 505
Score = 31.9 bits (69), Expect = 3.2
Identities = 16/46 (34%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Frame = +2
Query: 302 GAAXLGWCPRERLWRPDXVLL-NAAATTAGDYALRARVSNTGSVSW 436
G A P +++W+PD VL NA D +A + TG V+W
Sbjct: 104 GGAEFMRVPAQKIWKPDIVLYNNAVGDFQVDDKTKALLKYTGEVTW 149
>BC000513-1|AAH00513.1| 505|Homo sapiens cholinergic receptor,
nicotinic, alpha 3 protein.
Length = 505
Score = 31.9 bits (69), Expect = 3.2
Identities = 16/46 (34%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Frame = +2
Query: 302 GAAXLGWCPRERLWRPDXVLL-NAAATTAGDYALRARVSNTGSVSW 436
G A P +++W+PD VL NA D +A + TG V+W
Sbjct: 104 GGAEFMRVPAQKIWKPDIVLYNNAVGDFQVDDKTKALLKYTGEVTW 149
>AJ007783-1|CAA07682.1| 504|Homo sapiens nicotinic acetylcholine
receptor alpha-3 subunit protein.
Length = 504
Score = 31.9 bits (69), Expect = 3.2
Identities = 16/46 (34%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Frame = +2
Query: 302 GAAXLGWCPRERLWRPDXVLL-NAAATTAGDYALRARVSNTGSVSW 436
G A P +++W+PD VL NA D +A + TG V+W
Sbjct: 103 GGAEFMRVPAQKIWKPDIVLYNNAVGDFQVDDKTKALLKYTGEVTW 148
>AF385584-1|AAK68110.1| 489|Homo sapiens nicotinic cholinergic
receptor alpha 3 protein.
Length = 489
Score = 31.9 bits (69), Expect = 3.2
Identities = 16/46 (34%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Frame = +2
Query: 302 GAAXLGWCPRERLWRPDXVLL-NAAATTAGDYALRARVSNTGSVSW 436
G A P +++W+PD VL NA D +A + TG V+W
Sbjct: 98 GGAEFMRVPAQKIWKPDIVLYNNAVGDFQVDDKTKALLKYTGEVTW 143
>AC018890-1|AAY14687.1| 457|Homo sapiens unknown protein.
Length = 457
Score = 31.9 bits (69), Expect = 3.2
Identities = 16/41 (39%), Positives = 24/41 (58%), Gaps = 4/41 (9%)
Frame = +2
Query: 326 PRERLWRPDXVLLNAAATTAGDYAL----RARVSNTGSVSW 436
P E++WRPD VL N A GD+A+ + + TG ++W
Sbjct: 101 PSEKIWRPDLVLYNNA---DGDFAIVKFTKVLLQYTGHITW 138
>Y08416-1|CAA69693.1| 498|Homo sapiens nicotinic acetylcholine
receptor beta4 subunit precursor protein.
Length = 498
Score = 31.1 bits (67), Expect = 5.6
Identities = 21/84 (25%), Positives = 38/84 (45%), Gaps = 7/84 (8%)
Frame = +1
Query: 73 AIASAAECENATSPSLMIDSLL--ATYD---RDSPPDSKIV-VNLTLHLRHA-NIRESES 231
A+ C A + ++D LL Y+ R + S+++ + L L L ++ E E
Sbjct: 14 ALCGRGNCRVANAEEKLMDDLLNKTRYNNLIRPATSSSQLISIKLQLSLAQLISVNEREQ 73
Query: 232 TVRIQADLQMNWIDKRLSWNAGEW 303
+ L+ W D RL+WN+ +
Sbjct: 74 IMTTNVWLKQEWTDYRLTWNSSRY 97
>U62439-1|AAB40117.1| 498|Homo sapiens nicotinic acetylcholine
receptor beta4 subunit precursor protein.
Length = 498
Score = 31.1 bits (67), Expect = 5.6
Identities = 21/84 (25%), Positives = 38/84 (45%), Gaps = 7/84 (8%)
Frame = +1
Query: 73 AIASAAECENATSPSLMIDSLL--ATYD---RDSPPDSKIV-VNLTLHLRHA-NIRESES 231
A+ C A + ++D LL Y+ R + S+++ + L L L ++ E E
Sbjct: 14 ALCGRGNCRVANAEEKLMDDLLNKTRYNNLIRPATSSSQLISIKLQLSLAQLISVNEREQ 73
Query: 232 TVRIQADLQMNWIDKRLSWNAGEW 303
+ L+ W D RL+WN+ +
Sbjct: 74 IMTTNVWLKQEWTDYRLTWNSSRY 97
>U48861-1|AAA92123.1| 498|Homo sapiens beta 4 nicotinic
acetylcholine receptor subunit protein.
Length = 498
Score = 31.1 bits (67), Expect = 5.6
Identities = 21/84 (25%), Positives = 38/84 (45%), Gaps = 7/84 (8%)
Frame = +1
Query: 73 AIASAAECENATSPSLMIDSLL--ATYD---RDSPPDSKIV-VNLTLHLRHA-NIRESES 231
A+ C A + ++D LL Y+ R + S+++ + L L L ++ E E
Sbjct: 14 ALCGRGNCRVANAEEKLMDDLLNKTRYNNLIRPATSSSQLISIKLQLSLAQLISVNEREQ 73
Query: 232 TVRIQADLQMNWIDKRLSWNAGEW 303
+ L+ W D RL+WN+ +
Sbjct: 74 IMTTNVWLKQEWTDYRLTWNSSRY 97
>BC096083-1|AAH96083.1| 198|Homo sapiens CHRNB4 protein protein.
Length = 198
Score = 31.1 bits (67), Expect = 5.6
Identities = 21/84 (25%), Positives = 38/84 (45%), Gaps = 7/84 (8%)
Frame = +1
Query: 73 AIASAAECENATSPSLMIDSLL--ATYD---RDSPPDSKIV-VNLTLHLRHA-NIRESES 231
A+ C A + ++D LL Y+ R + S+++ + L L L ++ E E
Sbjct: 14 ALCGRGNCRVANAEEKLMDDLLNKTRYNNLIRPATSSSQLISIKLQLSLAQLISVNEREQ 73
Query: 232 TVRIQADLQMNWIDKRLSWNAGEW 303
+ L+ W D RL+WN+ +
Sbjct: 74 IMTTNVWLKQEWTDYRLTWNSSRY 97
>BC096082-1|AAH96082.1| 498|Homo sapiens cholinergic receptor,
nicotinic, beta 4 protein.
Length = 498
Score = 31.1 bits (67), Expect = 5.6
Identities = 21/84 (25%), Positives = 38/84 (45%), Gaps = 7/84 (8%)
Frame = +1
Query: 73 AIASAAECENATSPSLMIDSLL--ATYD---RDSPPDSKIV-VNLTLHLRHA-NIRESES 231
A+ C A + ++D LL Y+ R + S+++ + L L L ++ E E
Sbjct: 14 ALCGRGNCRVANAEEKLMDDLLNKTRYNNLIRPATSSSQLISIKLQLSLAQLISVNEREQ 73
Query: 232 TVRIQADLQMNWIDKRLSWNAGEW 303
+ L+ W D RL+WN+ +
Sbjct: 74 IMTTNVWLKQEWTDYRLTWNSSRY 97
>BC096081-1|AAH96081.1| 198|Homo sapiens CHRNB4 protein protein.
Length = 198
Score = 31.1 bits (67), Expect = 5.6
Identities = 21/84 (25%), Positives = 38/84 (45%), Gaps = 7/84 (8%)
Frame = +1
Query: 73 AIASAAECENATSPSLMIDSLL--ATYD---RDSPPDSKIV-VNLTLHLRHA-NIRESES 231
A+ C A + ++D LL Y+ R + S+++ + L L L ++ E E
Sbjct: 14 ALCGRGNCRVANAEEKLMDDLLNKTRYNNLIRPATSSSQLISIKLQLSLAQLISVNEREQ 73
Query: 232 TVRIQADLQMNWIDKRLSWNAGEW 303
+ L+ W D RL+WN+ +
Sbjct: 74 IMTTNVWLKQEWTDYRLTWNSSRY 97
>BC096080-1|AAH96080.1| 498|Homo sapiens cholinergic receptor,
nicotinic, beta 4 protein.
Length = 498
Score = 31.1 bits (67), Expect = 5.6
Identities = 21/84 (25%), Positives = 38/84 (45%), Gaps = 7/84 (8%)
Frame = +1
Query: 73 AIASAAECENATSPSLMIDSLL--ATYD---RDSPPDSKIV-VNLTLHLRHA-NIRESES 231
A+ C A + ++D LL Y+ R + S+++ + L L L ++ E E
Sbjct: 14 ALCGRGNCRVANAEEKLMDDLLNKTRYNNLIRPATSSSQLISIKLQLSLAQLISVNEREQ 73
Query: 232 TVRIQADLQMNWIDKRLSWNAGEW 303
+ L+ W D RL+WN+ +
Sbjct: 74 IMTTNVWLKQEWTDYRLTWNSSRY 97
>AJ306454-1|CAC34819.1| 497|Homo sapiens neuronal nicotinic
acetylcholine receptor beta-4 subunit protein.
Length = 497
Score = 31.1 bits (67), Expect = 5.6
Identities = 21/84 (25%), Positives = 38/84 (45%), Gaps = 7/84 (8%)
Frame = +1
Query: 73 AIASAAECENATSPSLMIDSLL--ATYD---RDSPPDSKIV-VNLTLHLRHA-NIRESES 231
A+ C A + ++D LL Y+ R + S+++ + L L L ++ E E
Sbjct: 14 ALCGRGNCRVANAEEKLMDDLLNKTRYNNLIRPATSSSQLISIKLQLSLAQLISVNEREQ 73
Query: 232 TVRIQADLQMNWIDKRLSWNAGEW 303
+ L+ W D RL+WN+ +
Sbjct: 74 IMTTNVWLKQEWTDYRLTWNSSRY 97
>AF306329-1|AAL02062.1| 498|Homo sapiens neuronal nicotinic
acetylcholine receptor beta 4 subunit protein.
Length = 498
Score = 31.1 bits (67), Expect = 5.6
Identities = 21/84 (25%), Positives = 38/84 (45%), Gaps = 7/84 (8%)
Frame = +1
Query: 73 AIASAAECENATSPSLMIDSLL--ATYD---RDSPPDSKIV-VNLTLHLRHA-NIRESES 231
A+ C A + ++D LL Y+ R + S+++ + L L L ++ E E
Sbjct: 14 ALCGRGNCRVANAEEKLMDDLLNKTRYNNLIRPATSSSQLISIKLQLSLAQLISVNEREQ 73
Query: 232 TVRIQADLQMNWIDKRLSWNAGEW 303
+ L+ W D RL+WN+ +
Sbjct: 74 IMTTNVWLKQEWTDYRLTWNSSRY 97
>X01715-1|CAA25861.1| 520|Homo sapiens acetylcholine receptor gamma
chain precursor protein.
Length = 520
Score = 30.7 bits (66), Expect = 7.3
Identities = 18/66 (27%), Positives = 32/66 (48%), Gaps = 5/66 (7%)
Frame = +1
Query: 121 MIDSLLATYDRDSPPDSKI--VVNLTLHLRHANI---RESESTVRIQADLQMNWIDKRLS 285
++ L+ YD + P + VVN++L L N+ E E + ++M W D RL
Sbjct: 32 LLADLMQNYDPNLRPAERDSDVVNVSLKLTLTNLISLNEREEALTTNVWIEMQWCDYRLR 91
Query: 286 WNAGEW 303
W+ ++
Sbjct: 92 WDPRDY 97
>L08485-1|AAA58490.1| 462|Homo sapiens GABA-benzodiazepine receptor
alpha-5-subunit protein.
Length = 462
Score = 30.7 bits (66), Expect = 7.3
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = +3
Query: 444 RLDISTPISMQXDNWPXDMQTCTFKFGS 527
RL IS MQ +++P D C KFGS
Sbjct: 166 RLTISAECPMQLEDFPMDAHACPLKFGS 193
>BT009830-1|AAP88832.1| 462|Homo sapiens gamma-aminobutyric acid
(GABA) A receptor, alpha 5 protein.
Length = 462
Score = 30.7 bits (66), Expect = 7.3
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = +3
Query: 444 RLDISTPISMQXDNWPXDMQTCTFKFGS 527
RL IS MQ +++P D C KFGS
Sbjct: 166 RLTISAECPMQLEDFPMDAHACPLKFGS 193
>BC113422-1|AAI13423.1| 462|Homo sapiens gamma-aminobutyric acid
(GABA) A receptor, alpha 5 protein.
Length = 462
Score = 30.7 bits (66), Expect = 7.3
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = +3
Query: 444 RLDISTPISMQXDNWPXDMQTCTFKFGS 527
RL IS MQ +++P D C KFGS
Sbjct: 166 RLTISAECPMQLEDFPMDAHACPLKFGS 193
>BC111979-1|AAI11980.1| 462|Homo sapiens gamma-aminobutyric acid
(GABA) A receptor, alpha 5, precursor protein.
Length = 462
Score = 30.7 bits (66), Expect = 7.3
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = +3
Query: 444 RLDISTPISMQXDNWPXDMQTCTFKFGS 527
RL IS MQ +++P D C KFGS
Sbjct: 166 RLTISAECPMQLEDFPMDAHACPLKFGS 193
>BC111802-1|AAI11803.1| 465|Homo sapiens CHRNG protein protein.
Length = 465
Score = 30.7 bits (66), Expect = 7.3
Identities = 18/66 (27%), Positives = 32/66 (48%), Gaps = 5/66 (7%)
Frame = +1
Query: 121 MIDSLLATYDRDSPPDSKI--VVNLTLHLRHANI---RESESTVRIQADLQMNWIDKRLS 285
++ L+ YD + P + VVN++L L N+ E E + ++M W D RL
Sbjct: 29 LLADLMQNYDPNLRPAERDSDVVNVSLKLTLTNLISLNEREEALTTNVWIEMQWCDYRLR 88
Query: 286 WNAGEW 303
W+ ++
Sbjct: 89 WDPRDY 94
>AC092165-3|AAY24103.1| 520|Homo sapiens unknown protein.
Length = 520
Score = 30.7 bits (66), Expect = 7.3
Identities = 18/66 (27%), Positives = 32/66 (48%), Gaps = 5/66 (7%)
Frame = +1
Query: 121 MIDSLLATYDRDSPPDSKI--VVNLTLHLRHANI---RESESTVRIQADLQMNWIDKRLS 285
++ L+ YD + P + VVN++L L N+ E E + ++M W D RL
Sbjct: 32 LLADLMQNYDPNLRPAERDSDVVNVSLKLTLTNLISLNEREEALTTNVWIEMQWCDYRLR 91
Query: 286 WNAGEW 303
W+ ++
Sbjct: 92 WDPRDY 97
>Y16281-1|CAA76154.1| 529|Homo sapiens nicotinic acetylcholine
receptor alpha2 subunit precursor protein.
Length = 529
Score = 30.3 bits (65), Expect = 9.7
Identities = 15/38 (39%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
Frame = +2
Query: 326 PRERLWRPDXVLL-NAAATTAGDYALRARVSNTGSVSW 436
P E +W PD VL NA A + +A + +TG+V W
Sbjct: 136 PSEMIWIPDIVLYNNADGEFAVTHMTKAHLFSTGTVHW 173
>Y08421-1|CAA69698.1| 627|Homo sapiens nicotinic acetylcholine
receptor alpha4 subunit precursor protein.
Length = 627
Score = 30.3 bits (65), Expect = 9.7
Identities = 15/38 (39%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
Frame = +2
Query: 326 PRERLWRPDXVLL-NAAATTAGDYALRARVSNTGSVSW 436
P E +WRPD VL NA A + +A + + G V W
Sbjct: 114 PSELIWRPDIVLYNNADGDFAVTHLTKAHLFHDGRVQW 151
>X89741-1|CAA61893.1| 627|Homo sapiens neuronal acetylcholine
receptor alpha-4 subunit protein.
Length = 627
Score = 30.3 bits (65), Expect = 9.7
Identities = 15/38 (39%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
Frame = +2
Query: 326 PRERLWRPDXVLL-NAAATTAGDYALRARVSNTGSVSW 436
P E +WRPD VL NA A + +A + + G V W
Sbjct: 114 PSELIWRPDIVLYNNADGDFAVTHLTKAHLFHDGRVQW 151
>X87629-1|CAA60959.1| 602|Homo sapiens nicotinic acetylcholine
receptor protein.
Length = 602
Score = 30.3 bits (65), Expect = 9.7
Identities = 15/38 (39%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
Frame = +2
Query: 326 PRERLWRPDXVLL-NAAATTAGDYALRARVSNTGSVSW 436
P E +WRPD VL NA A + +A + + G V W
Sbjct: 89 PSELIWRPDIVLYNNADGDFAVTHLTKAHLFHDGRVQW 126
>U62433-1|AAB40111.1| 627|Homo sapiens nicotinic acetylcholine
receptor alpha4 subunit precursor protein.
Length = 627
Score = 30.3 bits (65), Expect = 9.7
Identities = 15/38 (39%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
Frame = +2
Query: 326 PRERLWRPDXVLL-NAAATTAGDYALRARVSNTGSVSW 436
P E +WRPD VL NA A + +A + + G V W
Sbjct: 114 PSELIWRPDIVLYNNADGDFAVTHLTKAHLFHDGRVQW 151
>U62431-1|AAB40109.1| 529|Homo sapiens nicotinic acetylcholine
receptor alpha2 subunit precursor protein.
Length = 529
Score = 30.3 bits (65), Expect = 9.7
Identities = 15/38 (39%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
Frame = +2
Query: 326 PRERLWRPDXVLL-NAAATTAGDYALRARVSNTGSVSW 436
P E +W PD VL NA A + +A + +TG+V W
Sbjct: 136 PSEMIWIPDIVLYNNADGEFAVTHMTKAHLFSTGTVHW 173
>L35901-1|AAA64743.1| 627|Homo sapiens nicotinic acetylcholine
receptor alpha 4 subunit protein.
Length = 627
Score = 30.3 bits (65), Expect = 9.7
Identities = 15/38 (39%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
Frame = +2
Query: 326 PRERLWRPDXVLL-NAAATTAGDYALRARVSNTGSVSW 436
P E +WRPD VL NA A + +A + + G V W
Sbjct: 114 PSELIWRPDIVLYNNADGDFAVTHLTKAHLFHDGRVQW 151
>DQ093071-1|AAY88737.1| 627|Homo sapiens cholinergic receptor,
nicotinic, alpha polypeptide 4 protein.
Length = 627
Score = 30.3 bits (65), Expect = 9.7
Identities = 15/38 (39%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
Frame = +2
Query: 326 PRERLWRPDXVLL-NAAATTAGDYALRARVSNTGSVSW 436
P E +WRPD VL NA A + +A + + G V W
Sbjct: 114 PSELIWRPDIVLYNNADGDFAVTHLTKAHLFHDGRVQW 151
>BC096290-1|AAH96290.1| 627|Homo sapiens cholinergic receptor,
nicotinic, alpha 4 protein.
Length = 627
Score = 30.3 bits (65), Expect = 9.7
Identities = 15/38 (39%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
Frame = +2
Query: 326 PRERLWRPDXVLL-NAAATTAGDYALRARVSNTGSVSW 436
P E +WRPD VL NA A + +A + + G V W
Sbjct: 114 PSELIWRPDIVLYNNADGDFAVTHLTKAHLFHDGRVQW 151
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 98,613,211
Number of Sequences: 237096
Number of extensions: 2017293
Number of successful extensions: 5942
Number of sequences better than 10.0: 48
Number of HSP's better than 10.0 without gapping: 5168
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5932
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11326166088
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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