Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP03_FL5_J04
         (840 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF388659-3|AAK71993.1|  548|Apis mellifera 1D-myo-inositol-trisp...    29   0.040
AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.          23   4.6  

>AF388659-3|AAK71993.1|  548|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform C protein.
          Length = 548

 Score = 29.5 bits (63), Expect = 0.040
 Identities = 11/30 (36%), Positives = 22/30 (73%)
 Frame = +1

Query: 157 RDNLFQCLNKQVTNAVLKLIERERNGETIN 246
           R++LF+C NK+ +N  LK  E++R  ++++
Sbjct: 102 RNDLFECENKEKSNVCLKFEEQKRRKKSLD 131


>AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.
          Length = 652

 Score = 22.6 bits (46), Expect = 4.6
 Identities = 12/56 (21%), Positives = 24/56 (42%)
 Frame = +1

Query: 76  NRHWVKRECEEGRKGIFEIYQLALVTWRDNLFQCLNKQVTNAVLKLIERERNGETI 243
           +RH+ + + EE  +     ++   + W+    +C        VL+  +R  N  TI
Sbjct: 173 SRHYDRYKEEESNENYNWEHKETHIDWQPEDEECTEATAGAVVLETCQRNSNNSTI 228


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 208,895
Number of Sequences: 438
Number of extensions: 4091
Number of successful extensions: 5
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 26945694
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)