Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP03_FL5_I18
         (891 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    26   0.40 
AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ...    23   2.8  
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    23   2.8  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    23   2.8  
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    23   4.9  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    23   4.9  
AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cycl...    23   4.9  
AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cycl...    23   4.9  
U15954-1|AAA67442.1|   53|Apis mellifera abaecin precursor protein.    22   8.6  

>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
            protein.
          Length = 1770

 Score = 26.2 bits (55), Expect = 0.40
 Identities = 12/30 (40%), Positives = 19/30 (63%)
 Frame = +1

Query: 13   KAFDKVWHNGLIYKLYNMGVPDRLVLIIRD 102
            KA+ KV  N +I+++Y MG  DR + +  D
Sbjct: 1542 KAYQKVEENEIIFEIYKMG--DRFIGLTSD 1569


>AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein
           protein.
          Length = 1124

 Score = 23.4 bits (48), Expect = 2.8
 Identities = 18/56 (32%), Positives = 24/56 (42%), Gaps = 7/56 (12%)
 Frame = +2

Query: 134 SRERVPGPVTSQPESRKAPLSPRYYLVCI-------STIYPGLRRPIWRSSPMTPP 280
           S + VP    SQ   R  P+ P   + C+       STI   +R  +  S PM PP
Sbjct: 769 SAQNVPQNTNSQAIPR-IPILPMIPVYCVPVPQVNDSTILSPVREKLSSSQPMQPP 823


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
           AbsCAM-Ig7B protein.
          Length = 1923

 Score = 23.4 bits (48), Expect = 2.8
 Identities = 11/46 (23%), Positives = 21/46 (45%)
 Frame = +1

Query: 304 ALLHRRLQTAATTMGQWFRKWRIDINPTKSTAVLFKRGRPPNTTLS 441
           A LH  +         W +  +I++NP+ +  V  KR   P+  ++
Sbjct: 825 ATLHCEVHGDTPVTVTWLKGGKIELNPSTNYRVTVKREVTPDGVIA 870


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
           AbsCAM-Ig7A protein.
          Length = 1919

 Score = 23.4 bits (48), Expect = 2.8
 Identities = 11/46 (23%), Positives = 21/46 (45%)
 Frame = +1

Query: 304 ALLHRRLQTAATTMGQWFRKWRIDINPTKSTAVLFKRGRPPNTTLS 441
           A LH  +         W +  +I++NP+ +  V  KR   P+  ++
Sbjct: 821 ATLHCEVHGDTPVTVTWLKGGKIELNPSTNYRVTVKREVTPDGVIA 866


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 22.6 bits (46), Expect = 4.9
 Identities = 10/29 (34%), Positives = 16/29 (55%)
 Frame = -1

Query: 114 VRQVVSYDEHESVWHSHVIQFVYQTVVPD 28
           ++ VV  DE  S W+   ++F Y   +PD
Sbjct: 623 IKSVVPSDE--SHWNDLAMEFYYNRSIPD 649


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 22.6 bits (46), Expect = 4.9
 Identities = 10/29 (34%), Positives = 16/29 (55%)
 Frame = -1

Query: 114 VRQVVSYDEHESVWHSHVIQFVYQTVVPD 28
           ++ VV  DE  S W+   ++F Y   +PD
Sbjct: 661 IKSVVPSDE--SHWNDLAMEFYYNRSIPD 687


>AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 22.6 bits (46), Expect = 4.9
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = +2

Query: 218 ISTIYPGLRRPIWR 259
           + T+YPG+R P +R
Sbjct: 108 LGTLYPGMRAPSFR 121


>AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 22.6 bits (46), Expect = 4.9
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = +2

Query: 218 ISTIYPGLRRPIWR 259
           + T+YPG+R P +R
Sbjct: 108 LGTLYPGMRAPSFR 121


>U15954-1|AAA67442.1|   53|Apis mellifera abaecin precursor protein.
          Length = 53

 Score = 21.8 bits (44), Expect = 8.6
 Identities = 9/23 (39%), Positives = 12/23 (52%)
 Frame = +2

Query: 473 PAPTVRPITMFDQPIPWAPKVKY 541
           P P  RP   F    P+ PK+K+
Sbjct: 27  PQPGRRPFPTFPGQGPFNPKIKW 49


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 257,354
Number of Sequences: 438
Number of extensions: 6532
Number of successful extensions: 17
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 28783482
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)