Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP03_FL5_I17
(881 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 62 7e-12
AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic ac... 62 9e-12
AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic ac... 61 1e-11
DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 60 4e-11
DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholi... 59 5e-11
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 59 6e-11
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 59 6e-11
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 58 8e-11
DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholi... 58 8e-11
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 58 1e-10
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 57 2e-10
DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channe... 57 2e-10
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 57 2e-10
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 56 3e-10
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 56 4e-10
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 56 4e-10
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 56 6e-10
DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholi... 54 2e-09
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 53 3e-09
AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic ac... 50 4e-08
DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated... 46 5e-07
DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chlor... 46 5e-07
DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chlor... 44 2e-06
DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride c... 37 2e-04
DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride c... 37 3e-04
DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channe... 35 9e-04
DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chlor... 34 0.002
DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride... 34 0.002
DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride... 34 0.002
DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride... 34 0.002
DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chlor... 34 0.002
DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride... 31 0.019
AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl sub... 30 0.032
DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated... 29 0.075
DQ151547-1|ABA39280.1| 405|Apis mellifera tyramine receptor pro... 22 6.5
>DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine
receptor alpha3subunit protein.
Length = 566
Score = 62.1 bits (144), Expect = 7e-12
Identities = 41/162 (25%), Positives = 73/162 (45%), Gaps = 9/162 (5%)
Frame = +2
Query: 116 CENATSLSLMIDSLLATYDRDSPPDSKIVXNLTLHLR-------HANIRESXSTVRIQAD 274
C + D LL+ Y++ P + LT+ ++ N++ T +
Sbjct: 19 CSGNPDAKRLYDDLLSNYNKLVRPVVNVTDALTVKIKLKLSQLIDVNLKNQIMTTNLW-- 76
Query: 275 LQMNWIDKRLSWNAGEWGXXTWL-VSSERLWRPDVVLLXAAAITVG-DYALRARVSNNGS 448
++ +W D +L W+ E+G L V S+ +WRPD+VL A A +A ++ G
Sbjct: 77 VEQSWYDYKLKWDPKEYGGVEMLHVPSDHIWRPDIVLYNNADGNFEVTLATKATLNYTGR 136
Query: 449 VSWI*RLDISTPISMXLDNWPNDMQTCTFKFGSXMHNTDEMD 574
V W + + ++ +P D QTC KFGS ++ ++D
Sbjct: 137 VEWKPPAIYKSSCEIDVEYFPFDEQTCVMKFGSWTYDGFQVD 178
>AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha-3 protein.
Length = 537
Score = 61.7 bits (143), Expect = 9e-12
Identities = 45/156 (28%), Positives = 71/156 (45%), Gaps = 12/156 (7%)
Frame = +2
Query: 143 MIDSLLATYDRDSPPDSKIVXNLTLHLR-------HANIRESXSTVRIQADLQMNWIDKR 301
+ D LL+ Y+R P LT+ L N++ T + ++ W D +
Sbjct: 37 LYDDLLSNYNRLIRPVMNNTETLTVQLGLKLSQLIEMNLKNQVMTTNVW--VEQRWNDYK 94
Query: 302 LSWNAGEWGXXTWL-VSSERLWRPDVVLLXAAAITVGDYAL----RARVSNNGSVSWI*R 466
L WN E+G L V SE +W PD+VL A G+Y + +A + G VSW
Sbjct: 95 LKWNPEEYGGVEMLYVPSENIWLPDIVLYNNAD---GNYEVTLMTKATLKYTGDVSWKPP 151
Query: 467 LDISTPISMXLDNWPNDMQTCTFKFGSXMHNTDEMD 574
+ + ++ +P D Q+C KFGS +N ++D
Sbjct: 152 AIYKSSCEINVEYFPFDEQSCIMKFGSWTYNGAQVD 187
>AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic
acetylcholine receptorApisa2 subunit protein.
Length = 541
Score = 61.3 bits (142), Expect = 1e-11
Identities = 46/162 (28%), Positives = 71/162 (43%), Gaps = 9/162 (5%)
Frame = +2
Query: 116 CENATSLSLMIDSLLATYDRDSPPDSK----IVXNLTLHLRHA---NIRESXSTVRIQAD 274
C + D LL+ Y+R P S +V L L L N+++ T +
Sbjct: 15 CHGNPDAKRLYDDLLSNYNRLIRPVSNNNDTVVVKLGLRLSQLIDLNLKDQILTTNVW-- 72
Query: 275 LQMNWIDKRLSWNAGEWGXXTWL-VSSERLWRPDVVLLXAAAITVGDYAL-RARVSNNGS 448
L+ W D + W+ E+G T L V SE +W PD+VL A G + +A + G
Sbjct: 73 LEHEWQDHKFQWDPAEYGGVTELYVPSEHIWLPDIVLYNNADGEYGVTTMTKAILHYTGK 132
Query: 449 VSWI*RLDISTPISMXLDNWPNDMQTCTFKFGSXMHNTDEMD 574
V W + + + +P D QTC KFGS ++ ++D
Sbjct: 133 VLWTPPAIFKSSCEIDVRYFPFDQQTCFMKFGSWTYDGIQID 174
>DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine
receptor beta1subunit protein.
Length = 520
Score = 59.7 bits (138), Expect = 4e-11
Identities = 33/118 (27%), Positives = 59/118 (50%), Gaps = 5/118 (4%)
Frame = +2
Query: 233 NIRESXSTVRIQADLQMNWIDKRLSWNAGEWGXXTWL-VSSERLWRPDVVLLXAAAITVG 409
N+ E ++ L+ W D +L W+ ++G L + +++W+PD+VL A G
Sbjct: 65 NVNEKNQIMKSNVWLRFIWTDYQLQWDEADYGGIGVLRLPPDKVWKPDIVLFNNAD---G 121
Query: 410 DYALRAR----VSNNGSVSWI*RLDISTPISMXLDNWPNDMQTCTFKFGSXMHNTDEM 571
+Y +R + + NG V W+ + ++ + +P D QTC KFGS N D++
Sbjct: 122 NYEVRYKSNVLIYPNGDVLWVPPAIYQSSCTIDVTYFPFDQQTCIMKFGSWTFNGDQV 179
>DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholine
receptor beta2subunit protein.
Length = 427
Score = 59.3 bits (137), Expect = 5e-11
Identities = 43/162 (26%), Positives = 75/162 (46%), Gaps = 10/162 (6%)
Frame = +2
Query: 116 CENATSLSLMIDS---LLATYDRDSPPDSKIVXNLT--LHLRHANIRESXSTVRIQADLQ 280
C++ TS S + L YDRD P+ K + L ++H N+ E TV L+
Sbjct: 28 CKDITSTSALYRLKLYLFCDYDRDIIPEQKNATKIDFGLSIQHYNVDEYSHTVDFHVMLK 87
Query: 281 MNWIDKRLSWNAGEWGXXTWL-VSSERLWRPDVVL--LXAAAITVGDYALRARVSNNGSV 451
+ W L+W + E+ + V S +W PD+V+ + + I + ++ V N+G++
Sbjct: 88 LMWEQSHLTWKSSEFDSINSIRVKSYEIWVPDIVMHSVTSVGIDLEMPSVECIVFNSGTI 147
Query: 452 SWI*RLDISTPISMXLDN--WPNDMQTCTFKFGSXMHNTDEM 571
+ TP+ D+ WP D+ CT S H ++E+
Sbjct: 148 LCV-PFTTYTPV-CEYDHTWWPYDILNCTIHIASWSHGSNEI 187
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 58.8 bits (136), Expect = 6e-11
Identities = 31/116 (26%), Positives = 59/116 (50%), Gaps = 2/116 (1%)
Frame = +2
Query: 233 NIRESXSTVRIQADLQMNWIDKRLSWNAGEWGXXTWL-VSSERLWRPDVVLLXAAAITV- 406
++ E + A L++ W+D L WN E+G L ++ +LW+PD+++ +A
Sbjct: 93 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 152
Query: 407 GDYALRARVSNNGSVSWI*RLDISTPISMXLDNWPNDMQTCTFKFGSXMHNTDEMD 574
G Y V++NGS ++ + + + +P D Q C KFGS ++ +++D
Sbjct: 153 GTYQTNVVVTHNGSCLYVPPGIFKSTCKIDITWFPFDDQHCDMKFGSWTYDGNQVD 208
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 58.8 bits (136), Expect = 6e-11
Identities = 31/116 (26%), Positives = 59/116 (50%), Gaps = 2/116 (1%)
Frame = +2
Query: 233 NIRESXSTVRIQADLQMNWIDKRLSWNAGEWGXXTWL-VSSERLWRPDVVLLXAAAITV- 406
++ E + A L++ W+D L WN E+G L ++ +LW+PD+++ +A
Sbjct: 93 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 152
Query: 407 GDYALRARVSNNGSVSWI*RLDISTPISMXLDNWPNDMQTCTFKFGSXMHNTDEMD 574
G Y V++NGS ++ + + + +P D Q C KFGS ++ +++D
Sbjct: 153 GTYQTNVVVTHNGSCLYVPPGIFKSTCKIDITWFPFDDQHCDMKFGSWTYDGNQVD 208
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 58.4 bits (135), Expect = 8e-11
Identities = 31/116 (26%), Positives = 59/116 (50%), Gaps = 2/116 (1%)
Frame = +2
Query: 233 NIRESXSTVRIQADLQMNWIDKRLSWNAGEWGXXTWL-VSSERLWRPDVVLLXAAAITV- 406
++ E + A L++ W+D L WN E+G L ++ +LW+PD+++ +A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 407 GDYALRARVSNNGSVSWI*RLDISTPISMXLDNWPNDMQTCTFKFGSXMHNTDEMD 574
G Y V++NGS ++ + + + +P D Q C KFGS ++ +++D
Sbjct: 85 GTYQTSVVVTHNGSCLYVPPGIFKSTCKIDITWFPFDDQHCDMKFGSWTYDGNQVD 140
>DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholine
receptor alpha9subunit protein.
Length = 431
Score = 58.4 bits (135), Expect = 8e-11
Identities = 38/164 (23%), Positives = 75/164 (45%), Gaps = 8/164 (4%)
Frame = +2
Query: 119 ENATSLSLMIDSLLATYDRDSPPDS--KIVXNLTLHL--RHANIRESXSTVRIQADLQMN 286
++ T+L + L YD + P S +I N+T+ L + + S + + + + +
Sbjct: 39 DHPTTLLKLKRYLFCEYDPNVRPISSHQIANNVTMQLLPKLMEFDDWTSVMELHSWMTLM 98
Query: 287 WIDKRLSWNAGEWGXXTWL-VSSERLWRPDVVLLXAAAITVGDYAL---RARVSNNGSVS 454
W D LSW ++ ++ V S+ +W PD+ + + +T + V ++GSVS
Sbjct: 99 WTDSHLSWKPSDFDGINYIYVKSDDIWVPDISVYNSGDMTFDQTGIPPTTCLVFSSGSVS 158
Query: 455 WI*RLDISTPISMXLDNWPNDMQTCTFKFGSXMHNTDEMDXLXD 586
+ + + +WP D C FGS +H+ +E++ D
Sbjct: 159 CVPSVKHVAKCATDFSSWPYDTHRCRINFGSWVHSGEEVNIFLD 202
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 57.6 bits (133), Expect = 1e-10
Identities = 31/116 (26%), Positives = 59/116 (50%), Gaps = 2/116 (1%)
Frame = +2
Query: 233 NIRESXSTVRIQADLQMNWIDKRLSWNAGEWGXXTWL-VSSERLWRPDVVLLXAAAITV- 406
++ E + A L++ W+D L WN E+G L ++ +LW+PD+++ +A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 407 GDYALRARVSNNGSVSWI*RLDISTPISMXLDNWPNDMQTCTFKFGSXMHNTDEMD 574
G Y V+++GS ++ + M + +P D Q C KFGS ++ +++D
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKMDIAWFPFDDQHCDMKFGSWTYDGNQVD 140
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 57.2 bits (132), Expect = 2e-10
Identities = 31/116 (26%), Positives = 59/116 (50%), Gaps = 2/116 (1%)
Frame = +2
Query: 233 NIRESXSTVRIQADLQMNWIDKRLSWNAGEWGXXTWL-VSSERLWRPDVVLLXAAAITV- 406
++ E + A L++ W+D L WN E+G L ++ +LW+PD+++ +A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 407 GDYALRARVSNNGSVSWI*RLDISTPISMXLDNWPNDMQTCTFKFGSXMHNTDEMD 574
G Y V+++GS ++ + M + +P D Q C KFGS ++ +++D
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKMDVAWFPFDDQHCDMKFGSWTYDGNQVD 140
>DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channel
protein.
Length = 463
Score = 56.8 bits (131), Expect = 2e-10
Identities = 39/149 (26%), Positives = 66/149 (44%), Gaps = 7/149 (4%)
Frame = +2
Query: 122 NATSLSLMIDSLLATYDRDSPPD---SKIVXNLTLHLRHAN-IRESXSTVRIQADLQMNW 289
N +++S ++D+LL YD PD + + +R I E T + + +W
Sbjct: 2 NHSNISELLDNLLRGYDNSVRPDFGGPPATVEVDIMVRSMGPISEVDMTYSMDCYFRQSW 61
Query: 290 IDKRLSWNAGEWGXXTWLVSSERLWRPDVVLLXAAAI---TVGDYALRARVSNNGSVSWI 460
+D+RL++ G+ + R+W+PD T+ R+ +G V +
Sbjct: 62 VDRRLAFQGGKETLALSISMLARIWKPDTYFYNGKHSYLHTITSPNKFVRLYQDGRVLYS 121
Query: 461 *RLDISTPISMXLDNWPNDMQTCTFKFGS 547
RL I M L+N+P D Q C +FGS
Sbjct: 122 SRLTIKAGCPMNLENFPMDTQRCPLQFGS 150
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 56.8 bits (131), Expect = 2e-10
Identities = 40/153 (26%), Positives = 72/153 (47%), Gaps = 9/153 (5%)
Frame = +2
Query: 143 MIDSLLATYDRDSPP--DSKIVXNLTLHLR-----HANIRESXSTVRIQADLQMNWIDKR 301
+ D LL+ Y++ P ++ V + + L+ N++ T + ++ +W D +
Sbjct: 32 LYDDLLSNYNKLVRPVVNTSDVLRVCIKLKLSQLIDVNLKNQIMTTNLW--VEQSWYDYK 89
Query: 302 LSWNAGEWGXXTWL-VSSERLWRPDVVLLXAAAITVG-DYALRARVSNNGSVSWI*RLDI 475
L W E+G L V S+ +WRPD+VL A A +A + + G V W
Sbjct: 90 LRWEPKEYGGVKMLHVPSDHIWRPDIVLYNNADGNFEVTLATKATIYHQGLVEWKPPAIY 149
Query: 476 STPISMXLDNWPNDMQTCTFKFGSXMHNTDEMD 574
+ + ++ +P D QTC KFGS ++ ++D
Sbjct: 150 KSSCEIDVEYFPFDEQTCVLKFGSWTYDGFKVD 182
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 56.4 bits (130), Expect = 3e-10
Identities = 30/116 (25%), Positives = 59/116 (50%), Gaps = 2/116 (1%)
Frame = +2
Query: 233 NIRESXSTVRIQADLQMNWIDKRLSWNAGEWGXXTWL-VSSERLWRPDVVLLXAAAITV- 406
++ E + A L++ W+D L WN E+G L ++ +LW+PD+++ +A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 407 GDYALRARVSNNGSVSWI*RLDISTPISMXLDNWPNDMQTCTFKFGSXMHNTDEMD 574
G Y V+++GS ++ + + + +P D Q C KFGS ++ +++D
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKIDITWFPFDDQHCDMKFGSWTYDGNQVD 140
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 56.0 bits (129), Expect = 4e-10
Identities = 30/116 (25%), Positives = 59/116 (50%), Gaps = 2/116 (1%)
Frame = +2
Query: 233 NIRESXSTVRIQADLQMNWIDKRLSWNAGEWGXXTWL-VSSERLWRPDVVLLXAAAITV- 406
++ E + A L++ W+D L WN E+G L ++ +LW+PD+++ +A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 407 GDYALRARVSNNGSVSWI*RLDISTPISMXLDNWPNDMQTCTFKFGSXMHNTDEMD 574
G Y V+++GS ++ + + + +P D Q C KFGS ++ +++D
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKIDIAWFPFDDQHCDMKFGSWTYDGNQVD 140
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 56.0 bits (129), Expect = 4e-10
Identities = 30/116 (25%), Positives = 59/116 (50%), Gaps = 2/116 (1%)
Frame = +2
Query: 233 NIRESXSTVRIQADLQMNWIDKRLSWNAGEWGXXTWL-VSSERLWRPDVVLLXAAAITV- 406
++ E + A L++ W+D L WN E+G L ++ +LW+PD+++ +A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 407 GDYALRARVSNNGSVSWI*RLDISTPISMXLDNWPNDMQTCTFKFGSXMHNTDEMD 574
G Y V+++GS ++ + + + +P D Q C KFGS ++ +++D
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFGSTCKIDIAWFPFDDQHCDMKFGSWTYDGNQVD 140
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 55.6 bits (128), Expect = 6e-10
Identities = 42/156 (26%), Positives = 76/156 (48%), Gaps = 12/156 (7%)
Frame = +2
Query: 143 MIDSLLATYDRDSPP--DSKIVXNLTLHLR-----HANIRESXSTVRIQADLQMNWIDKR 301
+ D LL+ Y++ P ++ V + + L+ N++ T + ++ +W D +
Sbjct: 32 LYDDLLSNYNKLVRPVVNTSDVLRVCIKLKLSQLIDVNLKNQIMTTNLW--VEQSWYDYK 89
Query: 302 LSWNAGEWGXXTWL-VSSERLWRPDVVLLXAAAITVGDYAL----RARVSNNGSVSWI*R 466
L W E+G L V S+ +WRPD+VL A G+Y + +A V +G V W
Sbjct: 90 LRWEPKEYGGVKMLHVPSDHIWRPDIVLYNNAD---GNYEVTLMTKATVYYSGLVVWQPP 146
Query: 467 LDISTPISMXLDNWPNDMQTCTFKFGSXMHNTDEMD 574
+ S+ ++ +P D+QTC K GS ++ ++D
Sbjct: 147 AVYKSSCSIDVEFFPYDVQTCVLKLGSWTYDGFKVD 182
>DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholine
receptor alpha1subunit protein.
Length = 601
Score = 53.6 bits (123), Expect = 2e-09
Identities = 43/156 (27%), Positives = 70/156 (44%), Gaps = 12/156 (7%)
Frame = +2
Query: 143 MIDSLLATYDRDSPPDSKIVXNLTL-------HLRHANIRESXSTVRIQADLQMNWIDKR 301
+ D LL+ Y+R P LT+ L N++ T + ++ W D +
Sbjct: 24 LYDDLLSNYNRLIRPVGNNSDRLTVKMGLRLSQLIDVNLKNQIMTTNVW--VEQEWNDYK 81
Query: 302 LSWNAGEWGXXTWL-VSSERLWRPDVVLLXAAAITVGDYAL----RARVSNNGSVSWI*R 466
L WN ++G L V SE +W PD+VL A G+Y + +A + + G V W
Sbjct: 82 LKWNPDDYGGVDTLHVPSEHIWLPDIVLYNNAD---GNYEVTIMTKAILHHTGKVVWKPP 138
Query: 467 LDISTPISMXLDNWPNDMQTCTFKFGSXMHNTDEMD 574
+ + ++ +P D QTC KFGS ++ +D
Sbjct: 139 AIYKSFCEIDVEYFPFDEQTCFMKFGSWTYDGYTVD 174
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 53.2 bits (122), Expect = 3e-09
Identities = 29/102 (28%), Positives = 50/102 (49%), Gaps = 2/102 (1%)
Frame = +2
Query: 275 LQMNWIDKRLSWNAGEWGXXTWL-VSSERLWRPDVVLLXAAAITV-GDYALRARVSNNGS 448
L++ W D + WN ++G L + RLW+PDV++ +A G Y V NNG+
Sbjct: 76 LKLEWNDVNMRWNVSDYGGVRDLRIPPHRLWKPDVLMYNSADEGFDGTYPTNVVVKNNGT 135
Query: 449 VSWI*RLDISTPISMXLDNWPNDMQTCTFKFGSXMHNTDEMD 574
++ + + + +P D Q C KFGS ++ ++D
Sbjct: 136 CLYVPPGIFKSTCKIDITWFPFDDQRCEMKFGSWTYDGFQLD 177
>AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic
acetylcholine Apisa7-2 subunit protein.
Length = 461
Score = 49.6 bits (113), Expect = 4e-08
Identities = 32/129 (24%), Positives = 55/129 (42%), Gaps = 3/129 (2%)
Frame = +2
Query: 197 IVXNLTLHLRHANIRESXSTVRIQADLQMNWIDKRLSWNAGEW-GXXTWLVSSERLWRPD 373
+V L+LH ++ E + + W D L WNA E+ G V R+WRPD
Sbjct: 33 VVFGLSLH-HIIDVDEKNQILTTNCWVTQIWTDHHLKWNASEFAGIRVIRVPYNRVWRPD 91
Query: 374 VVLLXAAAITVGDYALRARV--SNNGSVSWI*RLDISTPISMXLDNWPNDMQTCTFKFGS 547
+L A + V S+ G V W+ + + ++ +P D Q C K+ S
Sbjct: 92 TILYNNADPQYSSAVINTNVIVSHTGEVVWLSHGIFRSSCDIDVEFFPFDEQRCVLKWAS 151
Query: 548 XMHNTDEMD 574
++ +++
Sbjct: 152 WTYDGYQLE 160
>DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 510
Score = 46.0 bits (104), Expect = 5e-07
Identities = 37/149 (24%), Positives = 64/149 (42%), Gaps = 10/149 (6%)
Frame = +2
Query: 131 SLSLMIDSLLATYDRDSPPD----SKIVXNLTLHLRHAN-IRESXSTVRIQADLQMNWID 295
++++++++LL Y+ + P + V + +R + E + + +W D
Sbjct: 36 NITMVLENLLMNYENNQLPTHGKGTPTVVKTNILIRSMGPVSELDMDYSMDCYFRQSWRD 95
Query: 296 KRLSWNAGEWGXXTWLVSSERLWRPDVVLLXAA-----AITVGDYALRARVSNNGSVSWI 460
RLS+ + ER+WRPD ITV + LR +S +G + +
Sbjct: 96 SRLSFLGPIKSLSLSIKMLERIWRPDTYFYNGKHSYVHTITVPNKLLR--ISQDGDILYS 153
Query: 461 *RLDISTPISMXLDNWPNDMQTCTFKFGS 547
RL I M L N+P D Q+C GS
Sbjct: 154 MRLTIKAKCPMELRNFPMDRQSCPLILGS 182
>DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 46.0 bits (104), Expect = 5e-07
Identities = 38/155 (24%), Positives = 66/155 (42%), Gaps = 12/155 (7%)
Frame = +2
Query: 143 MIDSLLATYDRDSPP------DSKIVXNLTLHLRH-ANIRESXSTVRIQADLQMNWIDKR 301
++D++L YD P D + + L +R A I + +Q + W+D+R
Sbjct: 35 VLDNILGGYDARIRPSGENATDGPAIVRVNLFVRSIATISDIKMEYSVQLTFREQWLDER 94
Query: 302 LSWN--AGEWGXXTWLVSSERLWRPDVVLLXAAAITVGDYALR---ARVSNNGSVSWI*R 466
L +N G T L + R+W PD+ + + R+ NGSV + R
Sbjct: 95 LRFNDFGGRLKYLT-LTDASRVWMPDLFFSNEKEGHFHNIIMPNVYIRIFPNGSVLYSIR 153
Query: 467 LDISTPISMXLDNWPNDMQTCTFKFGSXMHNTDEM 571
+ ++ M L +P D Q C+ + S TD++
Sbjct: 154 ISLTLSCPMNLKLYPLDRQVCSLRMASYGWTTDDL 188
>DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 44.0 bits (99), Expect = 2e-06
Identities = 37/155 (23%), Positives = 66/155 (42%), Gaps = 12/155 (7%)
Frame = +2
Query: 143 MIDSLLATYDRDSPP------DSKIVXNLTLHLRH-ANIRESXSTVRIQADLQMNWIDKR 301
++D++L YD P D V + + +R + I + +Q + W+D+R
Sbjct: 35 VLDNILGGYDARIRPSGENATDGPAVVRVNIFVRSISKIDDVTMEYSVQLTFREQWLDER 94
Query: 302 LSWN--AGEWGXXTWLVSSERLWRPDVVLLXAAAITVGDYALR---ARVSNNGSVSWI*R 466
L +N G T L + R+W PD+ + + R+ NGSV + R
Sbjct: 95 LRFNDFGGRLKYLT-LTDASRVWMPDLFFSNEKEGHFHNIIMPNVYIRIFPNGSVLYSIR 153
Query: 467 LDISTPISMXLDNWPNDMQTCTFKFGSXMHNTDEM 571
+ ++ M L +P D Q C+ + S TD++
Sbjct: 154 ISLTLSCPMNLKLYPLDRQVCSLRMASYGWTTDDL 188
>DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 37.1 bits (82), Expect = 2e-04
Identities = 37/155 (23%), Positives = 67/155 (43%), Gaps = 13/155 (8%)
Frame = +2
Query: 122 NATSLSLMIDSLLATYDRDSPPD---SKIVXNLTLH-LRHANIRESXSTVRIQADLQMNW 289
N ++S ++DS +YD+ P+ + +T++ L +++ E + + W
Sbjct: 8 NDVNISAILDSFSVSYDKRVRPNYGGPPVEVGVTMYVLSISSVSEVLMDFTLDFYFRQFW 67
Query: 290 IDKRLSWNAGEWGXXTWLVSSE---RLWRPDVVLLXAA------AITVGDYALRARVSNN 442
D RL++ G T V SE +W PD + A T ++ R+ ++
Sbjct: 68 TDPRLAFKK-RTGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFI---RIHHS 123
Query: 443 GSVSWI*RLDISTPISMXLDNWPNDMQTCTFKFGS 547
GS++ RL I+ M L +P D Q C + S
Sbjct: 124 GSITRSIRLTITASCPMNLQYFPMDRQLCHIEIES 158
>DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 36.7 bits (81), Expect = 3e-04
Identities = 37/155 (23%), Positives = 67/155 (43%), Gaps = 13/155 (8%)
Frame = +2
Query: 122 NATSLSLMIDSLLATYDRDSPPD---SKIVXNLTLH-LRHANIRESXSTVRIQADLQMNW 289
N ++S ++DS +YD+ P+ + +T++ L +++ E + + W
Sbjct: 8 NDVNISAILDSFSVSYDKRVRPNYGGPPVEVGVTMYVLSISSLSEVKMDFTLDFYFRQFW 67
Query: 290 IDKRLSWNAGEWGXXTWLVSSE---RLWRPDVVLLXAA------AITVGDYALRARVSNN 442
D RL++ G T V SE +W PD + A T ++ R+ ++
Sbjct: 68 TDPRLAFKK-RTGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFI---RIHHS 123
Query: 443 GSVSWI*RLDISTPISMXLDNWPNDMQTCTFKFGS 547
GS++ RL I+ M L +P D Q C + S
Sbjct: 124 GSITRSIRLTITASCPMNLQYFPMDRQLCHIEIES 158
>DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channel
protein.
Length = 489
Score = 35.1 bits (77), Expect = 9e-04
Identities = 26/94 (27%), Positives = 41/94 (43%), Gaps = 3/94 (3%)
Frame = +2
Query: 275 LQMNWIDKRLSWNAGEWGXXTWLVSSERLWRPDVVLLXAAAITVGDYALR---ARVSNNG 445
L W D+RL+++ E +E++W PD + D R R+S +G
Sbjct: 88 LNQYWKDERLAFSQEEEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLSGDG 147
Query: 446 SVSWI*RLDISTPISMXLDNWPNDMQTCTFKFGS 547
SV++ R + M L +P D Q CT + S
Sbjct: 148 SVTYGMRFTTTLACMMDLHYYPLDSQNCTVEIES 181
>DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chloride
channel protein.
Length = 383
Score = 34.3 bits (75), Expect = 0.002
Identities = 25/118 (21%), Positives = 50/118 (42%), Gaps = 5/118 (4%)
Frame = +2
Query: 233 NIRESXSTVRIQADLQMNWIDKRLSW--NAGEWGXXTWLVSSERLWRPDVVLLXAAAITV 406
+I E T L +W D RL N E + +WRPD A +T
Sbjct: 43 SINEESMTYVADIFLAQSWRDSRLRLPENMSEDYRILDVDWLHNIWRPDCFFKNAKKVTF 102
Query: 407 GDYALRAR---VSNNGSVSWI*RLDISTPISMXLDNWPNDMQTCTFKFGSXMHNTDEM 571
+ ++ + ++ ++ ++ +L + +M +++P+D Q C+ S H T ++
Sbjct: 103 HEMSIPNHYLWLYHDKTLLYMSKLTLVLSCAMKFESYPHDTQICSMMIESLSHTTQDL 160
>DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride
channel variant 4 protein.
Length = 489
Score = 33.9 bits (74), Expect = 0.002
Identities = 35/151 (23%), Positives = 64/151 (42%), Gaps = 8/151 (5%)
Frame = +2
Query: 119 ENATSLSLMIDSLLAT--YDRD--SPPDSKIVXNLT-LHLRHANIRESXSTVRIQADLQM 283
E+ S ++D+LL + YD+ P + N++ L L A+ ES ++ LQ
Sbjct: 56 EDGKSDKEILDNLLLSTRYDKRLLPPVQGTLTVNVSVLLLSLASPDESSLKYEVEFLLQQ 115
Query: 284 NWIDKRLSW-NAGEWGXXTWLVSSERLWRPDVVLLXAAAIT--VGDYALRARVSNNGSVS 454
W D RL + N ++ + + +W PD + + R+ NG+V+
Sbjct: 116 QWYDPRLRYSNRSQYEFLNAIHHYDDIWLPDTYFIMHGDFKDPLIPVHFALRIYRNGTVN 175
Query: 455 WI*RLDISTPISMXLDNWPNDMQTCTFKFGS 547
++ R + L+ +P D C+F S
Sbjct: 176 YLMRRHLILSCQGRLNIFPFDDPLCSFAIES 206
>DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride
channel variant 3 protein.
Length = 475
Score = 33.9 bits (74), Expect = 0.002
Identities = 35/151 (23%), Positives = 64/151 (42%), Gaps = 8/151 (5%)
Frame = +2
Query: 119 ENATSLSLMIDSLLAT--YDRD--SPPDSKIVXNLT-LHLRHANIRESXSTVRIQADLQM 283
E+ S ++D+LL + YD+ P + N++ L L A+ ES ++ LQ
Sbjct: 56 EDGKSDKEILDNLLLSTRYDKRLLPPVQGTLTVNVSVLLLSLASPDESSLKYEVEFLLQQ 115
Query: 284 NWIDKRLSW-NAGEWGXXTWLVSSERLWRPDVVLLXAAAIT--VGDYALRARVSNNGSVS 454
W D RL + N ++ + + +W PD + + R+ NG+V+
Sbjct: 116 QWYDPRLRYSNRSQYEFLNAIHHYDDIWLPDTYFIMHGDFKDPLIPVHFALRIYRNGTVN 175
Query: 455 WI*RLDISTPISMXLDNWPNDMQTCTFKFGS 547
++ R + L+ +P D C+F S
Sbjct: 176 YLMRRHLILSCQGRLNIFPFDDPLCSFAIES 206
>DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride
channel protein.
Length = 458
Score = 33.9 bits (74), Expect = 0.002
Identities = 35/151 (23%), Positives = 64/151 (42%), Gaps = 8/151 (5%)
Frame = +2
Query: 119 ENATSLSLMIDSLLAT--YDRD--SPPDSKIVXNLT-LHLRHANIRESXSTVRIQADLQM 283
E+ S ++D+LL + YD+ P + N++ L L A+ ES ++ LQ
Sbjct: 56 EDGKSDKEILDNLLLSTRYDKRLLPPVQGTLTVNVSVLLLSLASPDESSLKYEVEFLLQQ 115
Query: 284 NWIDKRLSW-NAGEWGXXTWLVSSERLWRPDVVLLXAAAIT--VGDYALRARVSNNGSVS 454
W D RL + N ++ + + +W PD + + R+ NG+V+
Sbjct: 116 QWYDPRLRYSNRSQYEFLNAIHHYDDIWLPDTYFIMHGDFKDPLIPVHFALRIYRNGTVN 175
Query: 455 WI*RLDISTPISMXLDNWPNDMQTCTFKFGS 547
++ R + L+ +P D C+F S
Sbjct: 176 YLMRRHLILSCQGRLNIFPFDDPLCSFAIES 206
>DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chloride
channel protein.
Length = 428
Score = 33.9 bits (74), Expect = 0.002
Identities = 18/76 (23%), Positives = 35/76 (46%), Gaps = 3/76 (3%)
Frame = +2
Query: 353 ERLWRPDVVLLXAAAITVGDYALRAR---VSNNGSVSWI*RLDISTPISMXLDNWPNDMQ 523
+ +WRPD A ++T + + + ++ ++ +L + +M +P+D Q
Sbjct: 116 KNMWRPDSFFKNAKSVTFQTMTIPNHYLWLYKDKTILYMVKLTLKLSCAMNFLIYPHDTQ 175
Query: 524 TCTFKFGSXMHNTDEM 571
C + S H TDEM
Sbjct: 176 ECKLQMESLSHTTDEM 191
>DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride
channel variant 1 protein.
Length = 509
Score = 30.7 bits (66), Expect = 0.019
Identities = 26/114 (22%), Positives = 46/114 (40%), Gaps = 3/114 (2%)
Frame = +2
Query: 215 LHLRHANIRESXSTVRIQADLQMNWIDKRLSW-NAGEWGXXTWLVSSERLWRPDVVLLXA 391
L L A+ ES ++ LQ W D RL + N ++ + + +W PD +
Sbjct: 144 LLLSLASPDESSLKYEVEFLLQQQWYDPRLRYSNRSQYEFLNAIHHYDDIWLPDTYFIMH 203
Query: 392 AAIT--VGDYALRARVSNNGSVSWI*RLDISTPISMXLDNWPNDMQTCTFKFGS 547
+ R+ NG+V+++ R + L+ +P D C+F S
Sbjct: 204 GDFKDPLIPVHFALRIYRNGTVNYLMRRHLILSCQGRLNIFPFDDPLCSFAIES 257
>AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl
subunit protein.
Length = 365
Score = 29.9 bits (64), Expect = 0.032
Identities = 27/96 (28%), Positives = 41/96 (42%), Gaps = 9/96 (9%)
Frame = +2
Query: 287 WIDKRLSWNAGEWGXXTWLVSSE---RLWRPDVVLLXAA------AITVGDYALRARVSN 439
W D RL++ G T V SE +W PD + A T ++ R+ +
Sbjct: 6 WTDPRLAFKK-RTGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFI---RIHH 61
Query: 440 NGSVSWI*RLDISTPISMXLDNWPNDMQTCTFKFGS 547
+GS++ RL I+ M L +P D Q C + S
Sbjct: 62 SGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIES 97
>DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 469
Score = 28.7 bits (61), Expect = 0.075
Identities = 20/74 (27%), Positives = 34/74 (45%), Gaps = 3/74 (4%)
Frame = +2
Query: 359 LWRPDVVLLX--AAAITVGDYA-LRARVSNNGSVSWI*RLDISTPISMXLDNWPNDMQTC 529
+W P V + ++AIT + + + +G V RL + + L+ +P D+Q C
Sbjct: 97 IWTPTVYVSNEPSSAITGNNVKDVLVSIDPSGMVRLNTRLQATLNCGLRLEKFPFDVQEC 156
Query: 530 TFKFGSXMHNTDEM 571
F S HN +M
Sbjct: 157 PLIFESWTHNVLDM 170
>DQ151547-1|ABA39280.1| 405|Apis mellifera tyramine receptor
protein.
Length = 405
Score = 22.2 bits (45), Expect = 6.5
Identities = 12/48 (25%), Positives = 26/48 (54%)
Frame = -3
Query: 561 VLCIXEPNLNVQVCMSLGQLSNXIEIGVLMSKRYIQETEPLLDTRARR 418
+LC +L++ +C + + + + + RY+ T+PL+ +R RR
Sbjct: 109 MLCDSWVSLDILLCTA-----SILSLCAISIDRYLAVTQPLIYSRRRR 151
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 183,962
Number of Sequences: 438
Number of extensions: 3664
Number of successful extensions: 76
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 37
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 37
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 28644972
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -