Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP03_FL5_H08
(814 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein. 24 1.5
AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein. 24 1.5
AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein. 24 1.5
AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein. 24 1.5
AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein. 24 1.5
AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein. 24 1.5
AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex det... 24 1.5
EF117814-1|ABO38437.1| 570|Apis mellifera cryptochrome 2 protein. 22 5.9
AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein. 22 5.9
AB204559-1|BAD89804.1| 832|Apis mellifera soluble guanylyl cycl... 22 5.9
DQ855482-1|ABH88169.1| 116|Apis mellifera chemosensory protein ... 22 7.8
AJ973399-1|CAJ01446.1| 116|Apis mellifera hypothetical protein ... 22 7.8
>AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 24.2 bits (50), Expect = 1.5
Identities = 11/44 (25%), Positives = 23/44 (52%)
Frame = -2
Query: 198 LVRASSELTVEXAVVQNRADRARNETDTTLRLGRSAEGRRTRVR 67
++ ++E+T V+ +++ NET T + S+ R+R R
Sbjct: 179 ILNKTNEITEHRTVLAVNIEKSENETKTCKKYAISSNSLRSRSR 222
Score = 22.2 bits (45), Expect = 5.9
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = -1
Query: 157 RTESCRSRTKRNRHD 113
RT SC SR + +RH+
Sbjct: 226 RTSSCHSRYEDSRHE 240
>AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 24.2 bits (50), Expect = 1.5
Identities = 11/44 (25%), Positives = 23/44 (52%)
Frame = -2
Query: 198 LVRASSELTVEXAVVQNRADRARNETDTTLRLGRSAEGRRTRVR 67
++ ++E+T V+ +++ NET T + S+ R+R R
Sbjct: 179 ILNKTNEITEHRTVLAVNIEKSENETKTCKKYAISSNSLRSRSR 222
Score = 22.2 bits (45), Expect = 5.9
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = -1
Query: 157 RTESCRSRTKRNRHD 113
RT SC SR + +RH+
Sbjct: 226 RTSSCHSRYEDSRHE 240
>AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 24.2 bits (50), Expect = 1.5
Identities = 11/44 (25%), Positives = 23/44 (52%)
Frame = -2
Query: 198 LVRASSELTVEXAVVQNRADRARNETDTTLRLGRSAEGRRTRVR 67
++ ++E+T V+ +++ NET T + S+ R+R R
Sbjct: 179 ILNKTNEITEHRTVLAVNIEKSENETKTCKKYAISSNSLRSRSR 222
Score = 22.2 bits (45), Expect = 5.9
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = -1
Query: 157 RTESCRSRTKRNRHD 113
RT SC SR + +RH+
Sbjct: 226 RTSSCHSRYEDSRHE 240
>AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 24.2 bits (50), Expect = 1.5
Identities = 11/44 (25%), Positives = 23/44 (52%)
Frame = -2
Query: 198 LVRASSELTVEXAVVQNRADRARNETDTTLRLGRSAEGRRTRVR 67
++ ++E+T V+ +++ NET T + S+ R+R R
Sbjct: 179 ILNKTNEITEHRTVLAVNIEKSENETKTCKKYAISSNSLRSRSR 222
>AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 24.2 bits (50), Expect = 1.5
Identities = 11/44 (25%), Positives = 23/44 (52%)
Frame = -2
Query: 198 LVRASSELTVEXAVVQNRADRARNETDTTLRLGRSAEGRRTRVR 67
++ ++E+T V+ +++ NET T + S+ R+R R
Sbjct: 179 ILNKTNEITEHRTVLAVNIEKSENETKTCKKYAISSNSLRSRSR 222
Score = 22.2 bits (45), Expect = 5.9
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = -1
Query: 157 RTESCRSRTKRNRHD 113
RT SC SR + +RH+
Sbjct: 226 RTSSCHSRYEDSRHE 240
>AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein.
Length = 400
Score = 24.2 bits (50), Expect = 1.5
Identities = 11/44 (25%), Positives = 23/44 (52%)
Frame = -2
Query: 198 LVRASSELTVEXAVVQNRADRARNETDTTLRLGRSAEGRRTRVR 67
++ ++E+T V+ +++ NET T + S+ R+R R
Sbjct: 179 ILNKTNEITEHRTVLAVNIEKSENETKTCKKYAISSNSLRSRSR 222
Score = 22.2 bits (45), Expect = 5.9
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = -1
Query: 157 RTESCRSRTKRNRHD 113
RT SC SR + +RH+
Sbjct: 226 RTSSCHSRYEDSRHE 240
>AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex
determiner protein.
Length = 401
Score = 24.2 bits (50), Expect = 1.5
Identities = 11/44 (25%), Positives = 23/44 (52%)
Frame = -2
Query: 198 LVRASSELTVEXAVVQNRADRARNETDTTLRLGRSAEGRRTRVR 67
++ ++E+T V+ +++ NET T + S+ R+R R
Sbjct: 179 ILNKTNEITEHRTVLAVNIEKSENETKTCKKYAISSNSLRSRSR 222
Score = 22.2 bits (45), Expect = 5.9
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = -1
Query: 157 RTESCRSRTKRNRHD 113
RT SC SR + +RH+
Sbjct: 226 RTSSCHSRYEDSRHE 240
>EF117814-1|ABO38437.1| 570|Apis mellifera cryptochrome 2 protein.
Length = 570
Score = 22.2 bits (45), Expect = 5.9
Identities = 8/19 (42%), Positives = 10/19 (52%)
Frame = +3
Query: 561 SSLKNHYFHCFITYSVGRK 617
SS +FHC+ GRK
Sbjct: 420 SSFFQQFFHCYCPVRFGRK 438
>AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 22.2 bits (45), Expect = 5.9
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = -1
Query: 157 RTESCRSRTKRNRHD 113
RT SC SR + +RH+
Sbjct: 226 RTSSCHSRYEDSRHE 240
>AB204559-1|BAD89804.1| 832|Apis mellifera soluble guanylyl cyclase
beta-3 protein.
Length = 832
Score = 22.2 bits (45), Expect = 5.9
Identities = 15/51 (29%), Positives = 26/51 (50%)
Frame = -2
Query: 177 LTVEXAVVQNRADRARNETDTTLRLGRSAEGRRTRVRIQSET*DDFRECQY 25
+TVE + + +DR RNE + L S + R R++ Q D+++ Y
Sbjct: 272 VTVEPILTERPSDRQRNEILLSDELD-SVDDRTLRLKGQMIYMDNWKMMMY 321
>DQ855482-1|ABH88169.1| 116|Apis mellifera chemosensory protein 1
protein.
Length = 116
Score = 21.8 bits (44), Expect = 7.8
Identities = 7/19 (36%), Positives = 11/19 (57%)
Frame = +3
Query: 540 VGDRFARSSLKNHYFHCFI 596
+ + A L+N Y+ CFI
Sbjct: 32 IDEILANDRLRNQYYDCFI 50
>AJ973399-1|CAJ01446.1| 116|Apis mellifera hypothetical protein
protein.
Length = 116
Score = 21.8 bits (44), Expect = 7.8
Identities = 7/19 (36%), Positives = 11/19 (57%)
Frame = +3
Query: 540 VGDRFARSSLKNHYFHCFI 596
+ + A L+N Y+ CFI
Sbjct: 32 IDEILANDRLRNQYYDCFI 50
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 222,742
Number of Sequences: 438
Number of extensions: 4883
Number of successful extensions: 22
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 25853301
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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