Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP03_FL5_G08
(829 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC101328-1|AAI01329.1| 268|Homo sapiens C5orf37 protein protein. 32 2.2
BC101327-1|AAI01328.1| 550|Homo sapiens chromosome 5 open readi... 32 2.2
BC101326-1|AAI01327.1| 550|Homo sapiens chromosome 5 open readi... 32 2.2
BC101325-1|AAI01326.1| 550|Homo sapiens chromosome 5 open readi... 32 2.2
AK093098-1|BAC04054.1| 550|Homo sapiens protein ( Homo sapiens ... 32 2.2
X89894-1|CAA61984.1| 443|Homo sapiens nuclear receptor protein. 31 3.9
S81243-1|AAB36006.1| 684|Homo sapiens CHN protein. 31 3.9
D78579-1|BAA11419.1| 626|Homo sapiens neuron derived orphan rec... 31 3.9
AL359710-3|CAI95139.1| 443|Homo sapiens nuclear receptor subfam... 31 3.9
AL359710-2|CAI95138.1| 626|Homo sapiens nuclear receptor subfam... 31 3.9
AL359710-1|CAM16648.1| 637|Homo sapiens nuclear receptor subfam... 31 3.9
AL358937-4|CAI95320.1| 626|Homo sapiens nuclear receptor subfam... 31 3.9
AL358937-3|CAM22558.1| 637|Homo sapiens nuclear receptor subfam... 31 3.9
U07987-1|AAA87672.1| 224|Homo sapiens immunoglobulin IgM heavy ... 30 8.9
>BC101328-1|AAI01329.1| 268|Homo sapiens C5orf37 protein protein.
Length = 268
Score = 32.3 bits (70), Expect = 2.2
Identities = 19/56 (33%), Positives = 28/56 (50%)
Frame = +2
Query: 638 PSAPSLKIPVTVDLCWTTADVTVEGVNVLATPSSSRITIGGLAXYASSHPPXAISG 805
PSAP + +PVT L + V G + A PS++ +T A +S H P + G
Sbjct: 155 PSAPPMPLPVTSPLL-PSPPAAVGGASATAVPSAASMTSTRAASASSVHVPVSALG 209
>BC101327-1|AAI01328.1| 550|Homo sapiens chromosome 5 open reading
frame 37 protein.
Length = 550
Score = 32.3 bits (70), Expect = 2.2
Identities = 19/56 (33%), Positives = 28/56 (50%)
Frame = +2
Query: 638 PSAPSLKIPVTVDLCWTTADVTVEGVNVLATPSSSRITIGGLAXYASSHPPXAISG 805
PSAP + +PVT L + V G + A PS++ +T A +S H P + G
Sbjct: 378 PSAPPMPLPVTSPLL-PSPPAAVGGASATAVPSAASMTSTRAASASSVHVPVSALG 432
>BC101326-1|AAI01327.1| 550|Homo sapiens chromosome 5 open reading
frame 37 protein.
Length = 550
Score = 32.3 bits (70), Expect = 2.2
Identities = 19/56 (33%), Positives = 28/56 (50%)
Frame = +2
Query: 638 PSAPSLKIPVTVDLCWTTADVTVEGVNVLATPSSSRITIGGLAXYASSHPPXAISG 805
PSAP + +PVT L + V G + A PS++ +T A +S H P + G
Sbjct: 378 PSAPPMPLPVTSPLL-PSPPAAVGGASATAVPSAASMTSTRAASASSVHVPVSALG 432
>BC101325-1|AAI01326.1| 550|Homo sapiens chromosome 5 open reading
frame 37 protein.
Length = 550
Score = 32.3 bits (70), Expect = 2.2
Identities = 19/56 (33%), Positives = 28/56 (50%)
Frame = +2
Query: 638 PSAPSLKIPVTVDLCWTTADVTVEGVNVLATPSSSRITIGGLAXYASSHPPXAISG 805
PSAP + +PVT L + V G + A PS++ +T A +S H P + G
Sbjct: 378 PSAPPMPLPVTSPLL-PSPPAAVGGASATAVPSAASMTSTRAASASSVHVPVSALG 432
>AK093098-1|BAC04054.1| 550|Homo sapiens protein ( Homo sapiens
cDNA FLJ35779 fis, clone TESTI2005380. ).
Length = 550
Score = 32.3 bits (70), Expect = 2.2
Identities = 19/56 (33%), Positives = 28/56 (50%)
Frame = +2
Query: 638 PSAPSLKIPVTVDLCWTTADVTVEGVNVLATPSSSRITIGGLAXYASSHPPXAISG 805
PSAP + +PVT L + V G + A PS++ +T A +S H P + G
Sbjct: 378 PSAPPMPLPVTSPLL-PSPPAAVGGASATAVPSAASMTSTRAASASSVHVPVSALG 432
>X89894-1|CAA61984.1| 443|Homo sapiens nuclear receptor protein.
Length = 443
Score = 31.5 bits (68), Expect = 3.9
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +2
Query: 500 FQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKI 661
+ +L DL TE + + T SLP++S+ ++GY Y + V P +K+
Sbjct: 35 YTKLTMDLGSTEITATATT--SLPSISTFVEGYSSNYELKPSCVYQMQRPLIKV 86
>S81243-1|AAB36006.1| 684|Homo sapiens CHN protein.
Length = 684
Score = 31.5 bits (68), Expect = 3.9
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +2
Query: 500 FQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKI 661
+ +L DL TE + + T SLP++S+ ++GY Y + V P +K+
Sbjct: 93 YTKLTMDLGSTEITATATT--SLPSISTFVEGYSSNYELKPSCVYQMQRPLIKV 144
>D78579-1|BAA11419.1| 626|Homo sapiens neuron derived orphan
receptor protein.
Length = 626
Score = 31.5 bits (68), Expect = 3.9
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +2
Query: 500 FQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKI 661
+ +L DL TE + + T SLP++S+ ++GY Y + V P +K+
Sbjct: 35 YTKLTMDLGSTEITATATT--SLPSISTFVEGYSSNYELKPSCVYQMQRPLIKV 86
>AL359710-3|CAI95139.1| 443|Homo sapiens nuclear receptor subfamily
4, group A, member 3 protein.
Length = 443
Score = 31.5 bits (68), Expect = 3.9
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +2
Query: 500 FQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKI 661
+ +L DL TE + + T SLP++S+ ++GY Y + V P +K+
Sbjct: 35 YTKLTMDLGSTEITATATT--SLPSISTFVEGYSSNYELKPSCVYQMQRPLIKV 86
>AL359710-2|CAI95138.1| 626|Homo sapiens nuclear receptor subfamily
4, group A, member 3 protein.
Length = 626
Score = 31.5 bits (68), Expect = 3.9
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +2
Query: 500 FQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKI 661
+ +L DL TE + + T SLP++S+ ++GY Y + V P +K+
Sbjct: 35 YTKLTMDLGSTEITATATT--SLPSISTFVEGYSSNYELKPSCVYQMQRPLIKV 86
>AL359710-1|CAM16648.1| 637|Homo sapiens nuclear receptor subfamily
4, group A, member 3 protein.
Length = 637
Score = 31.5 bits (68), Expect = 3.9
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +2
Query: 500 FQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKI 661
+ +L DL TE + + T SLP++S+ ++GY Y + V P +K+
Sbjct: 46 YTKLTMDLGSTEITATATT--SLPSISTFVEGYSSNYELKPSCVYQMQRPLIKV 97
>AL358937-4|CAI95320.1| 626|Homo sapiens nuclear receptor subfamily
4, group A, member 3 protein.
Length = 626
Score = 31.5 bits (68), Expect = 3.9
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +2
Query: 500 FQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKI 661
+ +L DL TE + + T SLP++S+ ++GY Y + V P +K+
Sbjct: 35 YTKLTMDLGSTEITATATT--SLPSISTFVEGYSSNYELKPSCVYQMQRPLIKV 86
>AL358937-3|CAM22558.1| 637|Homo sapiens nuclear receptor subfamily
4, group A, member 3 protein.
Length = 637
Score = 31.5 bits (68), Expect = 3.9
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +2
Query: 500 FQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKI 661
+ +L DL TE + + T SLP++S+ ++GY Y + V P +K+
Sbjct: 46 YTKLTMDLGSTEITATATT--SLPSISTFVEGYSSNYELKPSCVYQMQRPLIKV 97
>U07987-1|AAA87672.1| 224|Homo sapiens immunoglobulin IgM heavy
chain Fd fragment protein.
Length = 224
Score = 30.3 bits (65), Expect = 8.9
Identities = 24/76 (31%), Positives = 32/76 (42%), Gaps = 4/76 (5%)
Frame = +2
Query: 152 SSG*DRPPTFISSHSFR-PPLFRSFCRGCFATGFL---MTYSWKKLCL*XVSAASAIPSL 319
SSG PT S P R+ C GC A FL +T+SWK +S+ PS+
Sbjct: 118 SSGSASAPTLFPLVSCENSPSIRAACVGCLAQDFLPDSITFSWKYKNNSDISSTRGFPSV 177
Query: 320 VNAFSSSKPPQTDNPS 367
+ + Q PS
Sbjct: 178 LRGGKYAATSQVLLPS 193
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 117,651,632
Number of Sequences: 237096
Number of extensions: 2481508
Number of successful extensions: 4718
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 4538
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4713
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10370898348
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -