Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP03_FL5_G07
(918 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB028999-1|BAA83028.1| 804|Homo sapiens KIAA1076 protein protein. 35 0.48
BC023532-1|AAH23532.1| 641|Homo sapiens WW domain binding prote... 33 1.1
BC016441-1|AAH16441.2| 400|Homo sapiens WBP11 protein protein. 33 1.1
BC001621-1|AAH01621.1| 641|Homo sapiens WW domain binding prote... 33 1.1
AF118023-1|AAD30425.1| 641|Homo sapiens SH3 domain-binding prot... 33 1.1
AB029309-1|BAA88410.1| 641|Homo sapiens Npw38-binding protein N... 33 1.1
L35013-1|AAA60300.1| 424|Homo sapiens spliceosomal protein prot... 32 2.5
BC090883-1|AAH90883.1| 424|Homo sapiens splicing factor 3b, sub... 32 2.5
BC013886-1|AAH13886.1| 424|Homo sapiens splicing factor 3b, sub... 32 2.5
BC004273-1|AAH04273.1| 424|Homo sapiens splicing factor 3b, sub... 32 2.5
AL591493-2|CAI12554.1| 424|Homo sapiens splicing factor 3b, sub... 32 2.5
AL590487-2|CAI12648.1| 424|Homo sapiens splicing factor 3b, sub... 32 2.5
AK223322-1|BAD97042.1| 424|Homo sapiens splicing factor 3b, sub... 32 2.5
U88154-1|AAC17709.1| 1021|Homo sapiens proline and glutamic acid... 32 3.4
U88153-1|AAC17708.2| 1284|Homo sapiens PELP1 protein. 32 3.4
BC073988-1|AAH73988.1| 682|Homo sapiens FMNL1 protein protein. 32 3.4
BC069058-1|AAH69058.1| 1130|Homo sapiens proline, glutamic acid ... 32 3.4
BC010457-1|AAH10457.2| 1048|Homo sapiens PELP1 protein protein. 32 3.4
BC002875-1|AAH02875.2| 743|Homo sapiens PELP1 protein protein. 32 3.4
AY882602-1|AAW80659.1| 1061|Homo sapiens transcription factor HM... 32 3.4
AY278319-1|AAP32476.1| 1100|Homo sapiens leukocyte formin protein. 32 3.4
AF547989-1|AAN41255.1| 1130|Homo sapiens MNAR protein. 32 3.4
AF432213-1|AAL99920.1| 991|Homo sapiens CLL-associated antigen ... 32 3.4
AF363689-1|AAK73515.1| 1608|Homo sapiens capicua protein protein. 31 4.4
AC006486-3|AAD11988.1| 1453|Homo sapiens BC85722_1 protein. 31 4.4
AB002304-1|BAA20765.1| 1451|Homo sapiens KIAA0306 protein. 31 4.4
DQ854815-1|ABI75145.1| 112|Homo sapiens hyperpolarization-activ... 31 5.9
AJ133727-1|CAB42630.1| 889|Homo sapiens hyperpolarization-activ... 31 5.9
AJ012582-1|CAB42602.1| 889|Homo sapiens hyperpolarization-activ... 31 5.9
AC005559-2|AAC33280.2| 528|Homo sapiens hyperpolarization activ... 31 5.9
BC034003-1|AAH34003.1| 600|Homo sapiens PRR12 protein protein. 31 7.7
AB033031-1|BAA86519.1| 1217|Homo sapiens KIAA1205 protein protein. 31 7.7
>AB028999-1|BAA83028.1| 804|Homo sapiens KIAA1076 protein protein.
Length = 804
Score = 34.7 bits (76), Expect = 0.48
Identities = 16/41 (39%), Positives = 17/41 (41%)
Frame = +1
Query: 748 HAPRTPGPXXLDXGXPGPPPXXXVXSPXQXPPPXXXPXXLP 870
H PRT + G P PPP P PPP P LP
Sbjct: 403 HDPRTVTLDFRNAGIPAPPPPLPPQPPPPPPPPPVEPTKLP 443
>BC023532-1|AAH23532.1| 641|Homo sapiens WW domain binding protein
11 protein.
Length = 641
Score = 33.5 bits (73), Expect = 1.1
Identities = 23/65 (35%), Positives = 24/65 (36%), Gaps = 3/65 (4%)
Frame = +1
Query: 733 P*SXAHAPRTPGPXXLDXGXPGPPPXXXVXSPX---QXPPPXXXPXXLPXGXPXXXKXXX 903
P S AP PGP L G P PP P PPP P P G P
Sbjct: 398 PPSQIQAPPMPGPPPL--GPPPAPPLRPPGPPTGLPPGPPPGAPPFLRPPGMPGLRGPLP 455
Query: 904 QLLXP 918
+LL P
Sbjct: 456 RLLPP 460
Score = 31.5 bits (68), Expect = 4.4
Identities = 16/43 (37%), Positives = 17/43 (39%)
Frame = +1
Query: 754 PRTPGPXXLDXGXPGPPPXXXVXSPXQXPPPXXXPXXLPXGXP 882
P P P PGPPP P + PPP P P G P
Sbjct: 459 PPGPPPGRPPGPPPGPPPGLPPGPPPRGPPP-RLPPPAPPGIP 500
>BC016441-1|AAH16441.2| 400|Homo sapiens WBP11 protein protein.
Length = 400
Score = 33.5 bits (73), Expect = 1.1
Identities = 23/65 (35%), Positives = 24/65 (36%), Gaps = 3/65 (4%)
Frame = +1
Query: 733 P*SXAHAPRTPGPXXLDXGXPGPPPXXXVXSPX---QXPPPXXXPXXLPXGXPXXXKXXX 903
P S AP PGP L G P PP P PPP P P G P
Sbjct: 157 PPSQIQAPPMPGPPPL--GPPPAPPLRPPGPPTGLPPGPPPGAPPFLRPPGMPGLRGPLP 214
Query: 904 QLLXP 918
+LL P
Sbjct: 215 RLLPP 219
Score = 31.5 bits (68), Expect = 4.4
Identities = 16/43 (37%), Positives = 17/43 (39%)
Frame = +1
Query: 754 PRTPGPXXLDXGXPGPPPXXXVXSPXQXPPPXXXPXXLPXGXP 882
P P P PGPPP P + PPP P P G P
Sbjct: 218 PPGPPPGRPPGPPPGPPPGLPPGPPPRGPPP-RLPPPAPPGIP 259
>BC001621-1|AAH01621.1| 641|Homo sapiens WW domain binding protein
11 protein.
Length = 641
Score = 33.5 bits (73), Expect = 1.1
Identities = 23/65 (35%), Positives = 24/65 (36%), Gaps = 3/65 (4%)
Frame = +1
Query: 733 P*SXAHAPRTPGPXXLDXGXPGPPPXXXVXSPX---QXPPPXXXPXXLPXGXPXXXKXXX 903
P S AP PGP L G P PP P PPP P P G P
Sbjct: 398 PPSQIQAPPMPGPPPL--GPPPAPPLRPPGPPTGLPPGPPPGAPPFLRPPGMPGLRGPLP 455
Query: 904 QLLXP 918
+LL P
Sbjct: 456 RLLPP 460
Score = 31.5 bits (68), Expect = 4.4
Identities = 16/43 (37%), Positives = 17/43 (39%)
Frame = +1
Query: 754 PRTPGPXXLDXGXPGPPPXXXVXSPXQXPPPXXXPXXLPXGXP 882
P P P PGPPP P + PPP P P G P
Sbjct: 459 PPGPPPGRPPGPPPGPPPGLPPGPPPRGPPP-RLPPPAPPGIP 500
>AF118023-1|AAD30425.1| 641|Homo sapiens SH3 domain-binding protein
SNP70 protein.
Length = 641
Score = 33.5 bits (73), Expect = 1.1
Identities = 23/65 (35%), Positives = 24/65 (36%), Gaps = 3/65 (4%)
Frame = +1
Query: 733 P*SXAHAPRTPGPXXLDXGXPGPPPXXXVXSPX---QXPPPXXXPXXLPXGXPXXXKXXX 903
P S AP PGP L G P PP P PPP P P G P
Sbjct: 398 PPSQIQAPPMPGPPPL--GPPPAPPLRPPGPPTGLPPGPPPGAPPFLRPPGMPGLRGPLP 455
Query: 904 QLLXP 918
+LL P
Sbjct: 456 RLLPP 460
Score = 31.5 bits (68), Expect = 4.4
Identities = 16/43 (37%), Positives = 17/43 (39%)
Frame = +1
Query: 754 PRTPGPXXLDXGXPGPPPXXXVXSPXQXPPPXXXPXXLPXGXP 882
P P P PGPPP P + PPP P P G P
Sbjct: 459 PPGPPPGRPPGPPPGPPPGLPPGPPPRGPPP-RLPPPAPPGIP 500
>AB029309-1|BAA88410.1| 641|Homo sapiens Npw38-binding protein
NpwBP protein.
Length = 641
Score = 33.5 bits (73), Expect = 1.1
Identities = 23/65 (35%), Positives = 24/65 (36%), Gaps = 3/65 (4%)
Frame = +1
Query: 733 P*SXAHAPRTPGPXXLDXGXPGPPPXXXVXSPX---QXPPPXXXPXXLPXGXPXXXKXXX 903
P S AP PGP L G P PP P PPP P P G P
Sbjct: 398 PPSQIQAPPMPGPPPL--GPPPAPPLRPPGPPTGLPPGPPPGAPPFLRPPGMPGLRGPLP 455
Query: 904 QLLXP 918
+LL P
Sbjct: 456 RLLPP 460
Score = 31.5 bits (68), Expect = 4.4
Identities = 16/43 (37%), Positives = 17/43 (39%)
Frame = +1
Query: 754 PRTPGPXXLDXGXPGPPPXXXVXSPXQXPPPXXXPXXLPXGXP 882
P P P PGPPP P + PPP P P G P
Sbjct: 459 PPGPPPGRPPGPPPGPPPGLPPGPPPRGPPP-RLPPPAPPGIP 500
>L35013-1|AAA60300.1| 424|Homo sapiens spliceosomal protein
protein.
Length = 424
Score = 32.3 bits (70), Expect = 2.5
Identities = 16/43 (37%), Positives = 17/43 (39%)
Frame = +1
Query: 754 PRTPGPXXLDXGXPGPPPXXXVXSPXQXPPPXXXPXXLPXGXP 882
P P P G PPP + P PPP P LP G P
Sbjct: 218 PSAPNPVVSSLGSGLPPPG--MPPPGSFPPPVPPPGALPPGIP 258
>BC090883-1|AAH90883.1| 424|Homo sapiens splicing factor 3b,
subunit 4, 49kDa protein.
Length = 424
Score = 32.3 bits (70), Expect = 2.5
Identities = 16/43 (37%), Positives = 17/43 (39%)
Frame = +1
Query: 754 PRTPGPXXLDXGXPGPPPXXXVXSPXQXPPPXXXPXXLPXGXP 882
P P P G PPP + P PPP P LP G P
Sbjct: 218 PSAPNPVVSSLGSGLPPPG--MPPPGSFPPPVPPPGALPPGIP 258
>BC013886-1|AAH13886.1| 424|Homo sapiens splicing factor 3b,
subunit 4, 49kDa protein.
Length = 424
Score = 32.3 bits (70), Expect = 2.5
Identities = 16/43 (37%), Positives = 17/43 (39%)
Frame = +1
Query: 754 PRTPGPXXLDXGXPGPPPXXXVXSPXQXPPPXXXPXXLPXGXP 882
P P P G PPP + P PPP P LP G P
Sbjct: 218 PSAPNPVVSSLGSGLPPPG--MPPPGSFPPPVPPPGALPPGIP 258
>BC004273-1|AAH04273.1| 424|Homo sapiens splicing factor 3b,
subunit 4, 49kDa protein.
Length = 424
Score = 32.3 bits (70), Expect = 2.5
Identities = 16/43 (37%), Positives = 17/43 (39%)
Frame = +1
Query: 754 PRTPGPXXLDXGXPGPPPXXXVXSPXQXPPPXXXPXXLPXGXP 882
P P P G PPP + P PPP P LP G P
Sbjct: 218 PSAPNPVVSSLGSGLPPPG--MPPPGSFPPPVPPPGALPPGIP 258
>AL591493-2|CAI12554.1| 424|Homo sapiens splicing factor 3b,
subunit 4, 49kDa protein.
Length = 424
Score = 32.3 bits (70), Expect = 2.5
Identities = 16/43 (37%), Positives = 17/43 (39%)
Frame = +1
Query: 754 PRTPGPXXLDXGXPGPPPXXXVXSPXQXPPPXXXPXXLPXGXP 882
P P P G PPP + P PPP P LP G P
Sbjct: 218 PSAPNPVVSSLGSGLPPPG--MPPPGSFPPPVPPPGALPPGIP 258
>AL590487-2|CAI12648.1| 424|Homo sapiens splicing factor 3b,
subunit 4, 49kDa protein.
Length = 424
Score = 32.3 bits (70), Expect = 2.5
Identities = 16/43 (37%), Positives = 17/43 (39%)
Frame = +1
Query: 754 PRTPGPXXLDXGXPGPPPXXXVXSPXQXPPPXXXPXXLPXGXP 882
P P P G PPP + P PPP P LP G P
Sbjct: 218 PSAPNPVVSSLGSGLPPPG--MPPPGSFPPPVPPPGALPPGIP 258
>AK223322-1|BAD97042.1| 424|Homo sapiens splicing factor 3b,
subunit 4 variant protein.
Length = 424
Score = 32.3 bits (70), Expect = 2.5
Identities = 16/43 (37%), Positives = 17/43 (39%)
Frame = +1
Query: 754 PRTPGPXXLDXGXPGPPPXXXVXSPXQXPPPXXXPXXLPXGXP 882
P P P G PPP + P PPP P LP G P
Sbjct: 218 PSAPNPVVSSLGSGLPPPG--MPPPGSFPPPVPPPGALPPGIP 258
>U88154-1|AAC17709.1| 1021|Homo sapiens proline and glutamic acid
rich nuclear protein isoform protein.
Length = 1021
Score = 31.9 bits (69), Expect = 3.4
Identities = 16/41 (39%), Positives = 16/41 (39%)
Frame = +1
Query: 754 PRTPGPXXLDXGXPGPPPXXXVXSPXQXPPPXXXPXXLPXG 876
P PGP P PPP V P PPP P P G
Sbjct: 715 PAAPGPLP-----PPPPPPPPVPGPVTLPPPQLVPEGTPGG 750
>U88153-1|AAC17708.2| 1284|Homo sapiens PELP1 protein.
Length = 1284
Score = 31.9 bits (69), Expect = 3.4
Identities = 16/41 (39%), Positives = 16/41 (39%)
Frame = +1
Query: 754 PRTPGPXXLDXGXPGPPPXXXVXSPXQXPPPXXXPXXLPXG 876
P PGP P PPP V P PPP P P G
Sbjct: 978 PAAPGPLP-----PPPPPPPPVPGPVTLPPPQLVPEGTPGG 1013
>BC073988-1|AAH73988.1| 682|Homo sapiens FMNL1 protein protein.
Length = 682
Score = 31.9 bits (69), Expect = 3.4
Identities = 18/50 (36%), Positives = 18/50 (36%)
Frame = +1
Query: 733 P*SXAHAPRTPGPXXLDXGXPGPPPXXXVXSPXQXPPPXXXPXXLPXGXP 882
P S P P P L P PPP P PPP P P G P
Sbjct: 151 PGSPEPPPAPPLPGDLPPPPPPPPPPPGTDGPVPPPPPPPPPP--PGGPP 198
>BC069058-1|AAH69058.1| 1130|Homo sapiens proline, glutamic acid and
leucine rich protein 1 protein.
Length = 1130
Score = 31.9 bits (69), Expect = 3.4
Identities = 16/41 (39%), Positives = 16/41 (39%)
Frame = +1
Query: 754 PRTPGPXXLDXGXPGPPPXXXVXSPXQXPPPXXXPXXLPXG 876
P PGP P PPP V P PPP P P G
Sbjct: 833 PAAPGPLP-----PPPPPPPPVPGPVTLPPPQLVPEGTPGG 868
>BC010457-1|AAH10457.2| 1048|Homo sapiens PELP1 protein protein.
Length = 1048
Score = 31.9 bits (69), Expect = 3.4
Identities = 16/41 (39%), Positives = 16/41 (39%)
Frame = +1
Query: 754 PRTPGPXXLDXGXPGPPPXXXVXSPXQXPPPXXXPXXLPXG 876
P PGP P PPP V P PPP P P G
Sbjct: 751 PAAPGPLP-----PPPPPPPPVPGPVTLPPPQLVPEGTPGG 786
>BC002875-1|AAH02875.2| 743|Homo sapiens PELP1 protein protein.
Length = 743
Score = 31.9 bits (69), Expect = 3.4
Identities = 16/41 (39%), Positives = 16/41 (39%)
Frame = +1
Query: 754 PRTPGPXXLDXGXPGPPPXXXVXSPXQXPPPXXXPXXLPXG 876
P PGP P PPP V P PPP P P G
Sbjct: 446 PAAPGPLP-----PPPPPPPPVPGPVTLPPPQLVPEGTPGG 481
>AY882602-1|AAW80659.1| 1061|Homo sapiens transcription factor HMX3
protein.
Length = 1061
Score = 31.9 bits (69), Expect = 3.4
Identities = 16/41 (39%), Positives = 16/41 (39%)
Frame = +1
Query: 754 PRTPGPXXLDXGXPGPPPXXXVXSPXQXPPPXXXPXXLPXG 876
P PGP P PPP V P PPP P P G
Sbjct: 764 PAAPGPLP-----PPPPPPPPVPGPVTLPPPQLVPEGTPGG 799
>AY278319-1|AAP32476.1| 1100|Homo sapiens leukocyte formin protein.
Length = 1100
Score = 31.9 bits (69), Expect = 3.4
Identities = 18/50 (36%), Positives = 18/50 (36%)
Frame = +1
Query: 733 P*SXAHAPRTPGPXXLDXGXPGPPPXXXVXSPXQXPPPXXXPXXLPXGXP 882
P S P P P L P PPP P PPP P P G P
Sbjct: 569 PGSPEPPPAPPLPGDLPPPPPPPPPPPGTDGPVPPPPPPPPPP--PGGPP 616
>AF547989-1|AAN41255.1| 1130|Homo sapiens MNAR protein.
Length = 1130
Score = 31.9 bits (69), Expect = 3.4
Identities = 16/41 (39%), Positives = 16/41 (39%)
Frame = +1
Query: 754 PRTPGPXXLDXGXPGPPPXXXVXSPXQXPPPXXXPXXLPXG 876
P PGP P PPP V P PPP P P G
Sbjct: 833 PAAPGPLP-----PPPPPPPPVPGPVTLPPPQLVPEGTPGG 868
>AF432213-1|AAL99920.1| 991|Homo sapiens CLL-associated antigen
KW-13 protein.
Length = 991
Score = 31.9 bits (69), Expect = 3.4
Identities = 18/50 (36%), Positives = 18/50 (36%)
Frame = +1
Query: 733 P*SXAHAPRTPGPXXLDXGXPGPPPXXXVXSPXQXPPPXXXPXXLPXGXP 882
P S P P P L P PPP P PPP P P G P
Sbjct: 460 PGSPEPPPAPPLPGDLPPPPPPPPPPPGTDGPVPPPPPPPPPP--PGGPP 507
>AF363689-1|AAK73515.1| 1608|Homo sapiens capicua protein protein.
Length = 1608
Score = 31.5 bits (68), Expect = 4.4
Identities = 18/42 (42%), Positives = 18/42 (42%)
Frame = +1
Query: 745 AHAPRTPGPXXLDXGXPGPPPXXXVXSPXQXPPPXXXPXXLP 870
A AP TPG L PPP SP Q PPP LP
Sbjct: 879 ATAP-TPGIPILQSVPSAPPPKAQSVSPVQAPPPGGSAQLLP 919
>AC006486-3|AAD11988.1| 1453|Homo sapiens BC85722_1 protein.
Length = 1453
Score = 31.5 bits (68), Expect = 4.4
Identities = 18/42 (42%), Positives = 18/42 (42%)
Frame = +1
Query: 745 AHAPRTPGPXXLDXGXPGPPPXXXVXSPXQXPPPXXXPXXLP 870
A AP TPG L PPP SP Q PPP LP
Sbjct: 724 ATAP-TPGIPILQSVPSAPPPKAQSVSPVQAPPPGGSAQLLP 764
>AB002304-1|BAA20765.1| 1451|Homo sapiens KIAA0306 protein.
Length = 1451
Score = 31.5 bits (68), Expect = 4.4
Identities = 18/42 (42%), Positives = 18/42 (42%)
Frame = +1
Query: 745 AHAPRTPGPXXLDXGXPGPPPXXXVXSPXQXPPPXXXPXXLP 870
A AP TPG L PPP SP Q PPP LP
Sbjct: 722 ATAP-TPGIPILQSVPSAPPPKAQSVSPVQAPPPGGSAQLLP 762
>DQ854815-1|ABI75145.1| 112|Homo sapiens
hyperpolarization-activated cyclic nucleotide-gated
potassium channel 2 protein.
Length = 112
Score = 31.1 bits (67), Expect = 5.9
Identities = 13/30 (43%), Positives = 13/30 (43%)
Frame = +1
Query: 793 PGPPPXXXVXSPXQXPPPXXXPXXLPXGXP 882
PGPPP P Q PPP P P P
Sbjct: 20 PGPPPPPPPAPPQQQPPPPPPPAPPPGPGP 49
>AJ133727-1|CAB42630.1| 889|Homo sapiens
hyperpolarization-activated cyclic nucleotide-gated
channel hHCN2 protein.
Length = 889
Score = 31.1 bits (67), Expect = 5.9
Identities = 13/30 (43%), Positives = 13/30 (43%)
Frame = +1
Query: 793 PGPPPXXXVXSPXQXPPPXXXPXXLPXGXP 882
PGPPP P Q PPP P P P
Sbjct: 20 PGPPPPPPPAPPQQQPPPPPPPAPPPGPGP 49
>AJ012582-1|CAB42602.1| 889|Homo sapiens
hyperpolarization-activated cation channel HCN2 protein.
Length = 889
Score = 31.1 bits (67), Expect = 5.9
Identities = 13/30 (43%), Positives = 13/30 (43%)
Frame = +1
Query: 793 PGPPPXXXVXSPXQXPPPXXXPXXLPXGXP 882
PGPPP P Q PPP P P P
Sbjct: 20 PGPPPPPPPAPPQQQPPPPPPPAPPPGPGP 49
>AC005559-2|AAC33280.2| 528|Homo sapiens hyperpolarization
activated cyclic nucleotide-gated potassium channel 2
protein.
Length = 528
Score = 31.1 bits (67), Expect = 5.9
Identities = 13/30 (43%), Positives = 13/30 (43%)
Frame = +1
Query: 793 PGPPPXXXVXSPXQXPPPXXXPXXLPXGXP 882
PGPPP P Q PPP P P P
Sbjct: 20 PGPPPPPPPAPPQQQPPPPPPPAPPPGPGP 49
>BC034003-1|AAH34003.1| 600|Homo sapiens PRR12 protein protein.
Length = 600
Score = 30.7 bits (66), Expect = 7.7
Identities = 15/46 (32%), Positives = 18/46 (39%)
Frame = +1
Query: 745 AHAPRTPGPXXLDXGXPGPPPXXXVXSPXQXPPPXXXPXXLPXGXP 882
A++ TP P L+ P PP P PPP LP P
Sbjct: 78 ANSNGTPEPPLLEEKPPPTPPPAPTPQPQPPPPPPPPQPALPSPPP 123
>AB033031-1|BAA86519.1| 1217|Homo sapiens KIAA1205 protein protein.
Length = 1217
Score = 30.7 bits (66), Expect = 7.7
Identities = 15/46 (32%), Positives = 18/46 (39%)
Frame = +1
Query: 745 AHAPRTPGPXXLDXGXPGPPPXXXVXSPXQXPPPXXXPXXLPXGXP 882
A++ TP P L+ P PP P PPP LP P
Sbjct: 623 ANSNGTPEPPLLEEKPPPTPPPAPTPQPQPPPPPPPPQPALPSPPP 668
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 100,193,049
Number of Sequences: 237096
Number of extensions: 1923731
Number of successful extensions: 9700
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 7665
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9107
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11936890730
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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