Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP03_FL5_F20
         (844 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U43701-1|AAB03210.1|  156|Homo sapiens ribosomal protein L23a pr...    44   5e-04
U37230-1|AAB17510.1|  156|Homo sapiens ribosomal protein L23a pr...    44   5e-04
U02032-1|AAA03341.1|  156|Homo sapiens ribosomal protein L23a pr...    44   5e-04
L13799-1|AAA35681.1|  147|Homo sapiens protein ( Homo sapiens (c...    44   5e-04
BC058041-1|AAH58041.1|  156|Homo sapiens ribosomal protein L23a ...    44   5e-04
BC014459-1|AAH14459.1|  156|Homo sapiens ribosomal protein L23a ...    44   5e-04
AF001689-1|AAC51934.1|  156|Homo sapiens ribosomal protein L23A ...    44   5e-04
BC098172-1|AAH98172.1|  130|Homo sapiens RPL23AP13 protein protein.    43   0.002
BC096740-1|AAH96740.1|  130|Homo sapiens RPL23AP13 protein protein.    43   0.002
BC096706-1|AAH96706.1|  130|Homo sapiens RPL23AP13 protein protein.    43   0.002
AC092839-2|AAX93105.1|  130|Homo sapiens unknown protein.              43   0.002
AE006463-8|AAK61228.1|  156|Homo sapiens 60S ribosomal protein L...    37   0.080

>U43701-1|AAB03210.1|  156|Homo sapiens ribosomal protein L23a
           protein.
          Length = 156

 Score = 44.4 bits (100), Expect = 5e-04
 Identities = 21/41 (51%), Positives = 26/41 (63%)
 Frame = +3

Query: 660 KALKAQRKVVKGEHGKRVRKIRNSVHXRRPKTFEPPXHPKY 782
           KALKA++ V+KG H  + +KIR S   RRPKT      PKY
Sbjct: 20  KALKAKKAVLKGVHSHKKKKIRTSPTFRRPKTLRLRRQPKY 60


>U37230-1|AAB17510.1|  156|Homo sapiens ribosomal protein L23a
           protein.
          Length = 156

 Score = 44.4 bits (100), Expect = 5e-04
 Identities = 21/41 (51%), Positives = 26/41 (63%)
 Frame = +3

Query: 660 KALKAQRKVVKGEHGKRVRKIRNSVHXRRPKTFEPPXHPKY 782
           KALKA++ V+KG H  + +KIR S   RRPKT      PKY
Sbjct: 20  KALKAKKAVLKGVHSHKKKKIRTSPTFRRPKTLRLRRQPKY 60


>U02032-1|AAA03341.1|  156|Homo sapiens ribosomal protein L23a
           protein.
          Length = 156

 Score = 44.4 bits (100), Expect = 5e-04
 Identities = 21/41 (51%), Positives = 26/41 (63%)
 Frame = +3

Query: 660 KALKAQRKVVKGEHGKRVRKIRNSVHXRRPKTFEPPXHPKY 782
           KALKA++ V+KG H  + +KIR S   RRPKT      PKY
Sbjct: 20  KALKAKKAVLKGVHSHKKKKIRTSPTFRRPKTLRLRRQPKY 60


>L13799-1|AAA35681.1|  147|Homo sapiens protein ( Homo sapiens
           (clone 01) liver expressed protein mRNA, 3'end. ).
          Length = 147

 Score = 44.4 bits (100), Expect = 5e-04
 Identities = 21/41 (51%), Positives = 26/41 (63%)
 Frame = +3

Query: 660 KALKAQRKVVKGEHGKRVRKIRNSVHXRRPKTFEPPXHPKY 782
           KALKA++ V+KG H  + +KIR S   RRPKT      PKY
Sbjct: 11  KALKAKKAVLKGVHSHKKKKIRTSPTFRRPKTLRLRRQPKY 51


>BC058041-1|AAH58041.1|  156|Homo sapiens ribosomal protein L23a
           protein.
          Length = 156

 Score = 44.4 bits (100), Expect = 5e-04
 Identities = 21/41 (51%), Positives = 26/41 (63%)
 Frame = +3

Query: 660 KALKAQRKVVKGEHGKRVRKIRNSVHXRRPKTFEPPXHPKY 782
           KALKA++ V+KG H  + +KIR S   RRPKT      PKY
Sbjct: 20  KALKAKKAVLKGVHSHKKKKIRTSPTFRRPKTLRLRRQPKY 60


>BC014459-1|AAH14459.1|  156|Homo sapiens ribosomal protein L23a
           protein.
          Length = 156

 Score = 44.4 bits (100), Expect = 5e-04
 Identities = 21/41 (51%), Positives = 26/41 (63%)
 Frame = +3

Query: 660 KALKAQRKVVKGEHGKRVRKIRNSVHXRRPKTFEPPXHPKY 782
           KALKA++ V+KG H  + +KIR S   RRPKT      PKY
Sbjct: 20  KALKAKKAVLKGVHSHKKKKIRTSPTFRRPKTLRLRRQPKY 60


>AF001689-1|AAC51934.1|  156|Homo sapiens ribosomal protein L23A
           protein.
          Length = 156

 Score = 44.4 bits (100), Expect = 5e-04
 Identities = 21/41 (51%), Positives = 26/41 (63%)
 Frame = +3

Query: 660 KALKAQRKVVKGEHGKRVRKIRNSVHXRRPKTFEPPXHPKY 782
           KALKA++ V+KG H  + +KIR S   RRPKT      PKY
Sbjct: 20  KALKAKKAVLKGVHSHKKKKIRTSPTFRRPKTLRLRRQPKY 60


>BC098172-1|AAH98172.1|  130|Homo sapiens RPL23AP13 protein protein.
          Length = 130

 Score = 42.7 bits (96), Expect = 0.002
 Identities = 21/43 (48%), Positives = 30/43 (69%), Gaps = 3/43 (6%)
 Frame = +3

Query: 660 KALKAQRKVVKGEHGKRVRKIRNSVHXRRPKT---FEPPXHPK 779
           KALKA++ V+KG HG + +KIR S   +RPKT   + PP +P+
Sbjct: 20  KALKAKKVVLKGVHGHKKKKIRMSPTFQRPKTLRLWRPPRYPR 62


>BC096740-1|AAH96740.1|  130|Homo sapiens RPL23AP13 protein protein.
          Length = 130

 Score = 42.7 bits (96), Expect = 0.002
 Identities = 21/43 (48%), Positives = 30/43 (69%), Gaps = 3/43 (6%)
 Frame = +3

Query: 660 KALKAQRKVVKGEHGKRVRKIRNSVHXRRPKT---FEPPXHPK 779
           KALKA++ V+KG HG + +KIR S   +RPKT   + PP +P+
Sbjct: 20  KALKAKKVVLKGVHGHKKKKIRMSPTFQRPKTLRLWRPPRYPR 62


>BC096706-1|AAH96706.1|  130|Homo sapiens RPL23AP13 protein protein.
          Length = 130

 Score = 42.7 bits (96), Expect = 0.002
 Identities = 21/43 (48%), Positives = 30/43 (69%), Gaps = 3/43 (6%)
 Frame = +3

Query: 660 KALKAQRKVVKGEHGKRVRKIRNSVHXRRPKT---FEPPXHPK 779
           KALKA++ V+KG HG + +KIR S   +RPKT   + PP +P+
Sbjct: 20  KALKAKKVVLKGVHGHKKKKIRMSPTFQRPKTLRLWRPPRYPR 62


>AC092839-2|AAX93105.1|  130|Homo sapiens unknown protein.
          Length = 130

 Score = 42.7 bits (96), Expect = 0.002
 Identities = 21/43 (48%), Positives = 30/43 (69%), Gaps = 3/43 (6%)
 Frame = +3

Query: 660 KALKAQRKVVKGEHGKRVRKIRNSVHXRRPKT---FEPPXHPK 779
           KALKA++ V+KG HG + +KIR S   +RPKT   + PP +P+
Sbjct: 20  KALKAKKVVLKGVHGHKKKKIRMSPTFQRPKTLRLWRPPRYPR 62


>AE006463-8|AAK61228.1|  156|Homo sapiens 60S ribosomal protein L23A
           like protein.
          Length = 156

 Score = 37.1 bits (82), Expect = 0.080
 Identities = 17/41 (41%), Positives = 24/41 (58%)
 Frame = +3

Query: 660 KALKAQRKVVKGEHGKRVRKIRNSVHXRRPKTFEPPXHPKY 782
           KALKA++  +KG H    +K R S+  +RPKT      P+Y
Sbjct: 20  KALKAKKAALKGVHSHIKKKTRTSLTFQRPKTLRRRRRPEY 60


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 57,503,803
Number of Sequences: 237096
Number of extensions: 848022
Number of successful extensions: 1965
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1865
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1965
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10649685938
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)