Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP03_FL5_F19
(796 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY273778-1|AAP33487.1| 427|Apis mellifera ultraspiracle protein... 25 0.61
AF263459-1|AAF73057.1| 427|Apis mellifera ultraspiracle protein... 25 0.61
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 25 1.1
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 25 1.1
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 24 1.9
AY398690-1|AAR83734.1| 416|Apis mellifera major royal jelly pro... 22 7.5
AF388659-1|AAK71995.1| 782|Apis mellifera 1D-myo-inositol-trisp... 22 7.5
EF625898-1|ABR45905.1| 686|Apis mellifera hexamerin protein. 21 10.0
EF589162-1|ABQ84439.1| 686|Apis mellifera hexamerin 70c protein. 21 10.0
DQ288391-1|ABC41341.1| 630|Apis mellifera vasa protein protein. 21 10.0
AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein. 21 10.0
>AY273778-1|AAP33487.1| 427|Apis mellifera ultraspiracle protein
protein.
Length = 427
Score = 25.4 bits (53), Expect = 0.61
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = -3
Query: 656 TTSQRWSRGSTPRSLNTSRANNHHIKP 576
T +Q WSRG+T SL+ S + + P
Sbjct: 18 TQAQHWSRGNTWLSLDNSNMSMSSVGP 44
>AF263459-1|AAF73057.1| 427|Apis mellifera ultraspiracle protein
protein.
Length = 427
Score = 25.4 bits (53), Expect = 0.61
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = -3
Query: 656 TTSQRWSRGSTPRSLNTSRANNHHIKP 576
T +Q WSRG+T SL+ S + + P
Sbjct: 18 TQAQHWSRGNTWLSLDNSNMSMSSVGP 44
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 24.6 bits (51), Expect = 1.1
Identities = 10/19 (52%), Positives = 15/19 (78%)
Frame = -3
Query: 713 GLLFILFTFFRSR*KNKST 657
G+LF+LF+F R+R K + T
Sbjct: 20 GVLFVLFSFLRTRTKLQPT 38
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 24.6 bits (51), Expect = 1.1
Identities = 10/19 (52%), Positives = 15/19 (78%)
Frame = -3
Query: 713 GLLFILFTFFRSR*KNKST 657
G+LF+LF+F R+R K + T
Sbjct: 20 GVLFVLFSFLRTRTKLQPT 38
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 23.8 bits (49), Expect = 1.9
Identities = 9/22 (40%), Positives = 12/22 (54%)
Frame = -1
Query: 667 TNQPQHPSAGHGEAHHEASTLH 602
T P H + GHG +H A+ H
Sbjct: 411 TPGPHHHTMGHGHSHIHATPHH 432
>AY398690-1|AAR83734.1| 416|Apis mellifera major royal jelly
protein 8 protein.
Length = 416
Score = 21.8 bits (44), Expect = 7.5
Identities = 19/67 (28%), Positives = 34/67 (50%), Gaps = 2/67 (2%)
Frame = +1
Query: 10 FASQWHYTRLVVTQISATMSGGLDVLALNEEDVTKMLAATTHLGAENVNF-QMETYVYKR 186
FAS YT + S T+ G+ +AL+ +T+ L + L + N+N+ E +V +
Sbjct: 229 FASDPRYTTFTINGESFTLQSGIFGMALS--PLTQNLYYSA-LSSHNLNYVNTEQFVKSQ 285
Query: 187 -RADGTH 204
+A+ H
Sbjct: 286 YQANNVH 292
>AF388659-1|AAK71995.1| 782|Apis mellifera
1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
Length = 782
Score = 21.8 bits (44), Expect = 7.5
Identities = 6/30 (20%), Positives = 16/30 (53%)
Frame = +1
Query: 433 VLDPAQDHQPITEASYVNIPVIALCNTDSP 522
++DP ++++ E + IP++ + P
Sbjct: 167 IVDPVEENETYDEFDTIRIPIVRSLSKSPP 196
>EF625898-1|ABR45905.1| 686|Apis mellifera hexamerin protein.
Length = 686
Score = 21.4 bits (43), Expect = 10.0
Identities = 6/18 (33%), Positives = 13/18 (72%)
Frame = +3
Query: 543 YPMQHQVFPLYWFDVVVV 596
+P ++++P Y+FD V+
Sbjct: 159 FPAIYEIYPNYFFDSSVI 176
>EF589162-1|ABQ84439.1| 686|Apis mellifera hexamerin 70c protein.
Length = 686
Score = 21.4 bits (43), Expect = 10.0
Identities = 6/18 (33%), Positives = 13/18 (72%)
Frame = +3
Query: 543 YPMQHQVFPLYWFDVVVV 596
+P ++++P Y+FD V+
Sbjct: 159 FPAIYEIYPNYFFDSSVI 176
>DQ288391-1|ABC41341.1| 630|Apis mellifera vasa protein protein.
Length = 630
Score = 21.4 bits (43), Expect = 10.0
Identities = 9/14 (64%), Positives = 11/14 (78%)
Frame = -2
Query: 411 ECSLDLVSKSTWCE 370
E S+DLV ST+CE
Sbjct: 260 ERSVDLVVTSTYCE 273
>AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein.
Length = 898
Score = 21.4 bits (43), Expect = 10.0
Identities = 13/49 (26%), Positives = 18/49 (36%)
Frame = -2
Query: 276 GVLDGYDSTSSQNKFFPGTTQVDHMSTISTSFVDIGLHLEVNIFCPKMG 130
G + YD T K + S S V + LEVN ++G
Sbjct: 277 GHMISYDDTDGDGKLNVNEFYMAFSKLYSVSVVSLDKSLEVNHISARVG 325
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 238,734
Number of Sequences: 438
Number of extensions: 5584
Number of successful extensions: 12
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 25125039
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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