Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP03_FL5_F18
(880 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC022264-1|AAH22264.1| 498|Homo sapiens nuclear factor I/A prot... 32 3.2
AL445198-5|CAI13083.1| 532|Homo sapiens nuclear factor I/A prot... 32 3.2
AL445198-4|CAI13079.1| 466|Homo sapiens nuclear factor I/A prot... 32 3.2
AL445198-3|CAI13081.1| 509|Homo sapiens nuclear factor I/A prot... 32 3.2
AL445198-2|CAI13082.1| 487|Homo sapiens nuclear factor I/A prot... 32 3.2
AL445198-1|CAI13080.1| 498|Homo sapiens nuclear factor I/A prot... 32 3.2
AL096888-6|CAI23242.1| 532|Homo sapiens nuclear factor I/A prot... 32 3.2
AL096888-5|CAI23239.1| 466|Homo sapiens nuclear factor I/A prot... 32 3.2
AL096888-4|CAI23240.1| 509|Homo sapiens nuclear factor I/A prot... 32 3.2
AL096888-3|CAI23237.1| 487|Homo sapiens nuclear factor I/A prot... 32 3.2
AL096888-2|CAI23238.1| 380|Homo sapiens nuclear factor I/A prot... 32 3.2
AL096888-1|CAI23241.1| 498|Homo sapiens nuclear factor I/A prot... 32 3.2
AB037860-1|BAA92677.1| 561|Homo sapiens KIAA1439 protein protein. 32 3.2
X89894-1|CAA61984.1| 443|Homo sapiens nuclear receptor protein. 31 4.2
S81243-1|AAB36006.1| 684|Homo sapiens CHN protein. 31 4.2
D78579-1|BAA11419.1| 626|Homo sapiens neuron derived orphan rec... 31 4.2
AL359710-3|CAI95139.1| 443|Homo sapiens nuclear receptor subfam... 31 4.2
AL359710-2|CAI95138.1| 626|Homo sapiens nuclear receptor subfam... 31 4.2
AL359710-1|CAM16648.1| 637|Homo sapiens nuclear receptor subfam... 31 4.2
AL358937-4|CAI95320.1| 626|Homo sapiens nuclear receptor subfam... 31 4.2
AL358937-3|CAM22558.1| 637|Homo sapiens nuclear receptor subfam... 31 4.2
AK090481-1|BAC03462.1| 225|Homo sapiens FLJ00403 protein protein. 31 7.3
>BC022264-1|AAH22264.1| 498|Homo sapiens nuclear factor I/A
protein.
Length = 498
Score = 31.9 bits (69), Expect = 3.2
Identities = 19/62 (30%), Positives = 30/62 (48%), Gaps = 1/62 (1%)
Frame = +2
Query: 563 NPIIKSPIPYTNHPRLNIHFHQSLTPY*KEFAPGLKPPLSSEAPS-AYLTPSSLGMAKGV 739
+PII+ P PY +HP + H ++L KEF + P +A +L P+ K
Sbjct: 373 SPIIQQPGPYFSHPAIRYHPQETL----KEFVQLVCPDAGQQAGQVGFLNPNGSSQGKVH 428
Query: 740 SP 745
+P
Sbjct: 429 NP 430
>AL445198-5|CAI13083.1| 532|Homo sapiens nuclear factor I/A
protein.
Length = 532
Score = 31.9 bits (69), Expect = 3.2
Identities = 19/62 (30%), Positives = 30/62 (48%), Gaps = 1/62 (1%)
Frame = +2
Query: 563 NPIIKSPIPYTNHPRLNIHFHQSLTPY*KEFAPGLKPPLSSEAPS-AYLTPSSLGMAKGV 739
+PII+ P PY +HP + H ++L KEF + P +A +L P+ K
Sbjct: 396 SPIIQQPGPYFSHPAIRYHPQETL----KEFVQLVCPDAGQQAGQVGFLNPNGSSQGKVH 451
Query: 740 SP 745
+P
Sbjct: 452 NP 453
>AL445198-4|CAI13079.1| 466|Homo sapiens nuclear factor I/A
protein.
Length = 466
Score = 31.9 bits (69), Expect = 3.2
Identities = 19/62 (30%), Positives = 30/62 (48%), Gaps = 1/62 (1%)
Frame = +2
Query: 563 NPIIKSPIPYTNHPRLNIHFHQSLTPY*KEFAPGLKPPLSSEAPS-AYLTPSSLGMAKGV 739
+PII+ P PY +HP + H ++L KEF + P +A +L P+ K
Sbjct: 330 SPIIQQPGPYFSHPAIRYHPQETL----KEFVQLVCPDAGQQAGQVGFLNPNGSSQGKVH 385
Query: 740 SP 745
+P
Sbjct: 386 NP 387
>AL445198-3|CAI13081.1| 509|Homo sapiens nuclear factor I/A
protein.
Length = 509
Score = 31.9 bits (69), Expect = 3.2
Identities = 19/62 (30%), Positives = 30/62 (48%), Gaps = 1/62 (1%)
Frame = +2
Query: 563 NPIIKSPIPYTNHPRLNIHFHQSLTPY*KEFAPGLKPPLSSEAPS-AYLTPSSLGMAKGV 739
+PII+ P PY +HP + H ++L KEF + P +A +L P+ K
Sbjct: 373 SPIIQQPGPYFSHPAIRYHPQETL----KEFVQLVCPDAGQQAGQVGFLNPNGSSQGKVH 428
Query: 740 SP 745
+P
Sbjct: 429 NP 430
>AL445198-2|CAI13082.1| 487|Homo sapiens nuclear factor I/A
protein.
Length = 487
Score = 31.9 bits (69), Expect = 3.2
Identities = 19/62 (30%), Positives = 30/62 (48%), Gaps = 1/62 (1%)
Frame = +2
Query: 563 NPIIKSPIPYTNHPRLNIHFHQSLTPY*KEFAPGLKPPLSSEAPS-AYLTPSSLGMAKGV 739
+PII+ P PY +HP + H ++L KEF + P +A +L P+ K
Sbjct: 351 SPIIQQPGPYFSHPAIRYHPQETL----KEFVQLVCPDAGQQAGQVGFLNPNGSSQGKVH 406
Query: 740 SP 745
+P
Sbjct: 407 NP 408
>AL445198-1|CAI13080.1| 498|Homo sapiens nuclear factor I/A
protein.
Length = 498
Score = 31.9 bits (69), Expect = 3.2
Identities = 19/62 (30%), Positives = 30/62 (48%), Gaps = 1/62 (1%)
Frame = +2
Query: 563 NPIIKSPIPYTNHPRLNIHFHQSLTPY*KEFAPGLKPPLSSEAPS-AYLTPSSLGMAKGV 739
+PII+ P PY +HP + H ++L KEF + P +A +L P+ K
Sbjct: 373 SPIIQQPGPYFSHPAIRYHPQETL----KEFVQLVCPDAGQQAGQVGFLNPNGSSQGKVH 428
Query: 740 SP 745
+P
Sbjct: 429 NP 430
>AL096888-6|CAI23242.1| 532|Homo sapiens nuclear factor I/A
protein.
Length = 532
Score = 31.9 bits (69), Expect = 3.2
Identities = 19/62 (30%), Positives = 30/62 (48%), Gaps = 1/62 (1%)
Frame = +2
Query: 563 NPIIKSPIPYTNHPRLNIHFHQSLTPY*KEFAPGLKPPLSSEAPS-AYLTPSSLGMAKGV 739
+PII+ P PY +HP + H ++L KEF + P +A +L P+ K
Sbjct: 396 SPIIQQPGPYFSHPAIRYHPQETL----KEFVQLVCPDAGQQAGQVGFLNPNGSSQGKVH 451
Query: 740 SP 745
+P
Sbjct: 452 NP 453
>AL096888-5|CAI23239.1| 466|Homo sapiens nuclear factor I/A
protein.
Length = 466
Score = 31.9 bits (69), Expect = 3.2
Identities = 19/62 (30%), Positives = 30/62 (48%), Gaps = 1/62 (1%)
Frame = +2
Query: 563 NPIIKSPIPYTNHPRLNIHFHQSLTPY*KEFAPGLKPPLSSEAPS-AYLTPSSLGMAKGV 739
+PII+ P PY +HP + H ++L KEF + P +A +L P+ K
Sbjct: 330 SPIIQQPGPYFSHPAIRYHPQETL----KEFVQLVCPDAGQQAGQVGFLNPNGSSQGKVH 385
Query: 740 SP 745
+P
Sbjct: 386 NP 387
>AL096888-4|CAI23240.1| 509|Homo sapiens nuclear factor I/A
protein.
Length = 509
Score = 31.9 bits (69), Expect = 3.2
Identities = 19/62 (30%), Positives = 30/62 (48%), Gaps = 1/62 (1%)
Frame = +2
Query: 563 NPIIKSPIPYTNHPRLNIHFHQSLTPY*KEFAPGLKPPLSSEAPS-AYLTPSSLGMAKGV 739
+PII+ P PY +HP + H ++L KEF + P +A +L P+ K
Sbjct: 373 SPIIQQPGPYFSHPAIRYHPQETL----KEFVQLVCPDAGQQAGQVGFLNPNGSSQGKVH 428
Query: 740 SP 745
+P
Sbjct: 429 NP 430
>AL096888-3|CAI23237.1| 487|Homo sapiens nuclear factor I/A
protein.
Length = 487
Score = 31.9 bits (69), Expect = 3.2
Identities = 19/62 (30%), Positives = 30/62 (48%), Gaps = 1/62 (1%)
Frame = +2
Query: 563 NPIIKSPIPYTNHPRLNIHFHQSLTPY*KEFAPGLKPPLSSEAPS-AYLTPSSLGMAKGV 739
+PII+ P PY +HP + H ++L KEF + P +A +L P+ K
Sbjct: 351 SPIIQQPGPYFSHPAIRYHPQETL----KEFVQLVCPDAGQQAGQVGFLNPNGSSQGKVH 406
Query: 740 SP 745
+P
Sbjct: 407 NP 408
>AL096888-2|CAI23238.1| 380|Homo sapiens nuclear factor I/A
protein.
Length = 380
Score = 31.9 bits (69), Expect = 3.2
Identities = 19/62 (30%), Positives = 30/62 (48%), Gaps = 1/62 (1%)
Frame = +2
Query: 563 NPIIKSPIPYTNHPRLNIHFHQSLTPY*KEFAPGLKPPLSSEAPS-AYLTPSSLGMAKGV 739
+PII+ P PY +HP + H ++L KEF + P +A +L P+ K
Sbjct: 244 SPIIQQPGPYFSHPAIRYHPQETL----KEFVQLVCPDAGQQAGQVGFLNPNGSSQGKVH 299
Query: 740 SP 745
+P
Sbjct: 300 NP 301
>AL096888-1|CAI23241.1| 498|Homo sapiens nuclear factor I/A
protein.
Length = 498
Score = 31.9 bits (69), Expect = 3.2
Identities = 19/62 (30%), Positives = 30/62 (48%), Gaps = 1/62 (1%)
Frame = +2
Query: 563 NPIIKSPIPYTNHPRLNIHFHQSLTPY*KEFAPGLKPPLSSEAPS-AYLTPSSLGMAKGV 739
+PII+ P PY +HP + H ++L KEF + P +A +L P+ K
Sbjct: 373 SPIIQQPGPYFSHPAIRYHPQETL----KEFVQLVCPDAGQQAGQVGFLNPNGSSQGKVH 428
Query: 740 SP 745
+P
Sbjct: 429 NP 430
>AB037860-1|BAA92677.1| 561|Homo sapiens KIAA1439 protein protein.
Length = 561
Score = 31.9 bits (69), Expect = 3.2
Identities = 19/62 (30%), Positives = 30/62 (48%), Gaps = 1/62 (1%)
Frame = +2
Query: 563 NPIIKSPIPYTNHPRLNIHFHQSLTPY*KEFAPGLKPPLSSEAPS-AYLTPSSLGMAKGV 739
+PII+ P PY +HP + H ++L KEF + P +A +L P+ K
Sbjct: 425 SPIIQQPGPYFSHPAIRYHPQETL----KEFVQLVCPDAGQQAGQVGFLNPNGSSQGKVH 480
Query: 740 SP 745
+P
Sbjct: 481 NP 482
>X89894-1|CAA61984.1| 443|Homo sapiens nuclear receptor protein.
Length = 443
Score = 31.5 bits (68), Expect = 4.2
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +1
Query: 253 FQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKI 414
+ +L DL TE + + T SLP++S+ ++GY Y + V P +K+
Sbjct: 35 YTKLTMDLGSTEITATATT--SLPSISTFVEGYSSNYELKPSCVYQMQRPLIKV 86
>S81243-1|AAB36006.1| 684|Homo sapiens CHN protein.
Length = 684
Score = 31.5 bits (68), Expect = 4.2
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +1
Query: 253 FQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKI 414
+ +L DL TE + + T SLP++S+ ++GY Y + V P +K+
Sbjct: 93 YTKLTMDLGSTEITATATT--SLPSISTFVEGYSSNYELKPSCVYQMQRPLIKV 144
>D78579-1|BAA11419.1| 626|Homo sapiens neuron derived orphan
receptor protein.
Length = 626
Score = 31.5 bits (68), Expect = 4.2
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +1
Query: 253 FQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKI 414
+ +L DL TE + + T SLP++S+ ++GY Y + V P +K+
Sbjct: 35 YTKLTMDLGSTEITATATT--SLPSISTFVEGYSSNYELKPSCVYQMQRPLIKV 86
>AL359710-3|CAI95139.1| 443|Homo sapiens nuclear receptor subfamily
4, group A, member 3 protein.
Length = 443
Score = 31.5 bits (68), Expect = 4.2
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +1
Query: 253 FQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKI 414
+ +L DL TE + + T SLP++S+ ++GY Y + V P +K+
Sbjct: 35 YTKLTMDLGSTEITATATT--SLPSISTFVEGYSSNYELKPSCVYQMQRPLIKV 86
>AL359710-2|CAI95138.1| 626|Homo sapiens nuclear receptor subfamily
4, group A, member 3 protein.
Length = 626
Score = 31.5 bits (68), Expect = 4.2
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +1
Query: 253 FQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKI 414
+ +L DL TE + + T SLP++S+ ++GY Y + V P +K+
Sbjct: 35 YTKLTMDLGSTEITATATT--SLPSISTFVEGYSSNYELKPSCVYQMQRPLIKV 86
>AL359710-1|CAM16648.1| 637|Homo sapiens nuclear receptor subfamily
4, group A, member 3 protein.
Length = 637
Score = 31.5 bits (68), Expect = 4.2
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +1
Query: 253 FQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKI 414
+ +L DL TE + + T SLP++S+ ++GY Y + V P +K+
Sbjct: 46 YTKLTMDLGSTEITATATT--SLPSISTFVEGYSSNYELKPSCVYQMQRPLIKV 97
>AL358937-4|CAI95320.1| 626|Homo sapiens nuclear receptor subfamily
4, group A, member 3 protein.
Length = 626
Score = 31.5 bits (68), Expect = 4.2
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +1
Query: 253 FQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKI 414
+ +L DL TE + + T SLP++S+ ++GY Y + V P +K+
Sbjct: 35 YTKLTMDLGSTEITATATT--SLPSISTFVEGYSSNYELKPSCVYQMQRPLIKV 86
>AL358937-3|CAM22558.1| 637|Homo sapiens nuclear receptor subfamily
4, group A, member 3 protein.
Length = 637
Score = 31.5 bits (68), Expect = 4.2
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +1
Query: 253 FQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKI 414
+ +L DL TE + + T SLP++S+ ++GY Y + V P +K+
Sbjct: 46 YTKLTMDLGSTEITATATT--SLPSISTFVEGYSSNYELKPSCVYQMQRPLIKV 97
>AK090481-1|BAC03462.1| 225|Homo sapiens FLJ00403 protein protein.
Length = 225
Score = 30.7 bits (66), Expect = 7.3
Identities = 14/36 (38%), Positives = 17/36 (47%)
Frame = -3
Query: 686 LMTTEALTPARTPFSTASGIDGNGC*VWGGWCMESG 579
LM TEAL + S A ++G GC GW G
Sbjct: 60 LMKTEALVTVKANSSHAGNVNGRGCGTESGWAALKG 95
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 118,261,404
Number of Sequences: 237096
Number of extensions: 2602740
Number of successful extensions: 6459
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 5930
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6459
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11215125244
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -