Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP03_FL5_F07
(830 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81512-7|CAD54133.1| 504|Caenorhabditis elegans Hypothetical pr... 50 2e-06
AL033515-1|CAD54179.1| 504|Caenorhabditis elegans Hypothetical ... 50 2e-06
AL033511-1|CAA22072.2| 504|Caenorhabditis elegans Hypothetical ... 50 2e-06
Z78417-4|CAB01685.2| 531|Caenorhabditis elegans Hypothetical pr... 46 4e-05
X98600-1|CAA67197.1| 511|Caenorhabditis elegans alpha nicotinic... 46 4e-05
X98599-1|CAA67196.1| 511|Caenorhabditis elegans alpha nicotinic... 46 4e-05
U88175-2|AAB42282.2| 511|Caenorhabditis elegans Uncoordinated p... 46 4e-05
AF288374-1|AAK83056.1| 502|Caenorhabditis elegans nicotinic ace... 45 8e-05
AC006708-21|AAF60421.3| 502|Caenorhabditis elegans Uncoordinate... 45 8e-05
AC006834-2|AAF40009.1| 562|Caenorhabditis elegans Acetylcholine... 44 1e-04
U39855-1|AAA81080.3| 615|Caenorhabditis elegans Hypothetical pr... 44 2e-04
X86403-1|CAA60157.1| 575|Caenorhabditis elegans nicotinic acety... 43 2e-04
U23525-1|AAK71377.1| 575|Caenorhabditis elegans Acetylcholine r... 43 2e-04
U88177-6|AAB42293.1| 446|Caenorhabditis elegans Acetylcholine r... 40 0.002
U88177-5|AAT48618.1| 515|Caenorhabditis elegans Acetylcholine r... 40 0.002
AY523512-1|AAR98634.1| 499|Caenorhabditis elegans acetylcholine... 40 0.002
AC084197-42|AAU87806.2| 544|Caenorhabditis elegans Acetylcholin... 40 0.002
Z81071-1|CAB03014.2| 510|Caenorhabditis elegans Hypothetical pr... 40 0.002
AY523513-1|AAR98635.1| 510|Caenorhabditis elegans acetylcholine... 40 0.002
AL110479-15|CAB54361.2| 400|Caenorhabditis elegans Hypothetical... 40 0.002
AF038614-9|AAB92062.2| 445|Caenorhabditis elegans Hypothetical ... 40 0.003
AF022973-5|AAC25797.4| 479|Caenorhabditis elegans Acetylcholine... 40 0.003
X83887-1|CAA58764.1| 498|Caenorhabditis elegans alpha-1 subunit... 38 0.007
AY523511-1|AAR98633.1| 498|Caenorhabditis elegans acetylcholine... 38 0.007
AF022973-7|AAN84815.1| 480|Caenorhabditis elegans Acetylcholine... 38 0.007
AF022973-6|AAC25796.1| 498|Caenorhabditis elegans Acetylcholine... 38 0.007
AF016445-13|AAC69055.3| 371|Caenorhabditis elegans Ligand-gated... 38 0.007
Z81093-1|CAB03148.2| 507|Caenorhabditis elegans Hypothetical pr... 38 0.009
X98601-1|CAA67198.1| 507|Caenorhabditis elegans non-alpha nicot... 38 0.009
X98246-1|CAA66902.1| 507|Caenorhabditis elegans nicotinic acety... 38 0.009
AL110490-4|CAB54450.1| 474|Caenorhabditis elegans Hypothetical ... 38 0.009
Z50029-2|CAA90341.3| 537|Caenorhabditis elegans Hypothetical pr... 38 0.012
Z67737-1|CAA91536.2| 399|Caenorhabditis elegans Hypothetical pr... 37 0.015
Z92837-3|CAB07402.3| 502|Caenorhabditis elegans Hypothetical pr... 36 0.027
Z68118-7|CAA92184.2| 573|Caenorhabditis elegans Hypothetical pr... 36 0.047
AF187013-1|AAG35183.1| 573|Caenorhabditis elegans nicotinic ace... 36 0.047
AC006631-5|AAF39790.3| 469|Caenorhabditis elegans Acetylcholine... 36 0.047
Z70266-4|CAA94206.3| 534|Caenorhabditis elegans Hypothetical pr... 35 0.062
Z66500-2|CAA91304.2| 500|Caenorhabditis elegans Hypothetical pr... 35 0.062
Z80220-5|CAB02308.1| 493|Caenorhabditis elegans Hypothetical pr... 35 0.082
X83888-1|CAA58765.1| 493|Caenorhabditis elegans beta-1 subunit ... 35 0.082
U81144-1|AAB39358.1| 493|Caenorhabditis elegans non-alpha nicot... 35 0.082
AC006808-1|AAF60813.1| 486|Caenorhabditis elegans Hypothetical ... 35 0.082
U88167-6|AAB42223.1| 461|Caenorhabditis elegans Acetylcholine r... 34 0.11
Z67737-5|CAA91541.2| 401|Caenorhabditis elegans Hypothetical pr... 34 0.14
U28735-8|AAF99957.2| 434|Caenorhabditis elegans Acetylcholine r... 34 0.14
AY519852-1|AAR89633.1| 434|Caenorhabditis elegans acetylcholine... 34 0.14
U53337-6|AAA96188.2| 510|Caenorhabditis elegans Acetylcholine r... 33 0.25
Z93778-6|CAB07843.2| 554|Caenorhabditis elegans Hypothetical pr... 33 0.33
AY523514-1|AAR98636.1| 554|Caenorhabditis elegans acetylcholine... 33 0.33
AC024207-2|AAL77193.1| 425|Caenorhabditis elegans Hypothetical ... 33 0.33
AC024207-1|AAL77194.1| 428|Caenorhabditis elegans Hypothetical ... 33 0.33
Z99281-1|CAB16504.2| 439|Caenorhabditis elegans Hypothetical pr... 32 0.44
Y08637-1|CAA69927.1| 487|Caenorhabditis elegans nicotinic acety... 32 0.44
U23525-2|AAK71378.1| 487|Caenorhabditis elegans Acetylcholine r... 32 0.44
AF047656-7|AAC05108.2| 462|Caenorhabditis elegans Ligand-gated ... 32 0.58
U28929-5|AAA68348.2| 438|Caenorhabditis elegans Gaba/glycine re... 31 1.0
Z99281-29|CAH04731.2| 438|Caenorhabditis elegans Hypothetical p... 31 1.3
AF016664-8|AAY44018.1| 397|Caenorhabditis elegans Hypothetical ... 31 1.3
Z93396-5|CAB07714.1| 633|Caenorhabditis elegans Hypothetical pr... 29 4.1
Z67737-4|CAA91539.2| 401|Caenorhabditis elegans Hypothetical pr... 29 4.1
DQ645956-1|ABG36764.1| 624|Caenorhabditis elegans molting prote... 29 4.1
AC006618-5|ABB88234.1| 513|Caenorhabditis elegans Gaba/glycine ... 29 5.4
AC006618-4|ABB88233.1| 546|Caenorhabditis elegans Gaba/glycine ... 29 5.4
Z81125-6|CAI79225.1| 234|Caenorhabditis elegans Hypothetical pr... 28 9.4
Z81125-5|CAB03381.2| 398|Caenorhabditis elegans Hypothetical pr... 28 9.4
Z67737-2|CAA91537.3| 400|Caenorhabditis elegans Hypothetical pr... 28 9.4
Z46795-7|CAO82048.1| 2371|Caenorhabditis elegans Hypothetical pr... 28 9.4
Z46795-5|CAA86789.5| 2393|Caenorhabditis elegans Hypothetical pr... 28 9.4
Z46795-4|CAM82783.2| 2184|Caenorhabditis elegans Hypothetical pr... 28 9.4
Z46795-3|CAM82782.2| 2491|Caenorhabditis elegans Hypothetical pr... 28 9.4
Z46792-9|CAO82020.1| 2371|Caenorhabditis elegans Hypothetical pr... 28 9.4
Z46792-7|CAA86769.5| 2393|Caenorhabditis elegans Hypothetical pr... 28 9.4
Z46792-6|CAM82812.2| 2184|Caenorhabditis elegans Hypothetical pr... 28 9.4
Z46792-5|CAM82811.2| 2491|Caenorhabditis elegans Hypothetical pr... 28 9.4
Z46792-2|CAL44970.3| 2202|Caenorhabditis elegans Hypothetical pr... 28 9.4
DQ823041-1|ABH03415.1| 2166|Caenorhabditis elegans MPZ-1 protein. 28 9.4
AF408760-1|AAO27839.1| 318|Caenorhabditis elegans unknown prote... 28 9.4
>Z81512-7|CAD54133.1| 504|Caenorhabditis elegans Hypothetical
protein Y44A6E.1a protein.
Length = 504
Score = 50.0 bits (114), Expect = 2e-06
Identities = 30/108 (27%), Positives = 57/108 (52%), Gaps = 5/108 (4%)
Frame = +1
Query: 118 MIDSLLATYDRESPPDSKIVVNLTLHLXHA-NIRESESTVRILADLQMNXIDKRLSWNAG 294
+ + LL+ ++ +PPD + V L L H I E + T+ +L + + +D L+W+
Sbjct: 70 LTEYLLSRHNLNAPPDGLLYVEYELELVHILGIDELKQTMTVLIYVDEHWVDPSLTWDPA 129
Query: 295 EWG--CXTWLVSSERLWRPDVVLLNAAATTAGDYALR--ARVSNNGSV 426
+G TW + +++W PD+++ N A A+R AR+ NG++
Sbjct: 130 LFGGITKTW-IPLDKIWVPDIIVFNMLAHEDLLSAVRAPARIHYNGTI 176
>AL033515-1|CAD54179.1| 504|Caenorhabditis elegans Hypothetical
protein Y44A6E.1a protein.
Length = 504
Score = 50.0 bits (114), Expect = 2e-06
Identities = 30/108 (27%), Positives = 57/108 (52%), Gaps = 5/108 (4%)
Frame = +1
Query: 118 MIDSLLATYDRESPPDSKIVVNLTLHLXHA-NIRESESTVRILADLQMNXIDKRLSWNAG 294
+ + LL+ ++ +PPD + V L L H I E + T+ +L + + +D L+W+
Sbjct: 70 LTEYLLSRHNLNAPPDGLLYVEYELELVHILGIDELKQTMTVLIYVDEHWVDPSLTWDPA 129
Query: 295 EWG--CXTWLVSSERLWRPDVVLLNAAATTAGDYALR--ARVSNNGSV 426
+G TW + +++W PD+++ N A A+R AR+ NG++
Sbjct: 130 LFGGITKTW-IPLDKIWVPDIIVFNMLAHEDLLSAVRAPARIHYNGTI 176
>AL033511-1|CAA22072.2| 504|Caenorhabditis elegans Hypothetical
protein Y44A6E.1a protein.
Length = 504
Score = 50.0 bits (114), Expect = 2e-06
Identities = 30/108 (27%), Positives = 57/108 (52%), Gaps = 5/108 (4%)
Frame = +1
Query: 118 MIDSLLATYDRESPPDSKIVVNLTLHLXHA-NIRESESTVRILADLQMNXIDKRLSWNAG 294
+ + LL+ ++ +PPD + V L L H I E + T+ +L + + +D L+W+
Sbjct: 70 LTEYLLSRHNLNAPPDGLLYVEYELELVHILGIDELKQTMTVLIYVDEHWVDPSLTWDPA 129
Query: 295 EWG--CXTWLVSSERLWRPDVVLLNAAATTAGDYALR--ARVSNNGSV 426
+G TW + +++W PD+++ N A A+R AR+ NG++
Sbjct: 130 LFGGITKTW-IPLDKIWVPDIIVFNMLAHEDLLSAVRAPARIHYNGTI 176
>Z78417-4|CAB01685.2| 531|Caenorhabditis elegans Hypothetical
protein C35C5.5 protein.
Length = 531
Score = 45.6 bits (103), Expect = 4e-05
Identities = 29/116 (25%), Positives = 55/116 (47%), Gaps = 7/116 (6%)
Frame = +1
Query: 106 HCPIMIDSLLATYDRESPP----DSKIVVNLTLHLXHA-NIRESESTVRILADLQMNXID 270
H ++++LL Y++ P + V +L ++ E + L+M D
Sbjct: 28 HVSQLLENLLTDYNKAVRPVHNASDALKVKFGANLCRLIDVDEVNQVLTTSLWLEMQWYD 87
Query: 271 KRLSWNAGEWGCXTWL-VSSERLWRPDVVLL-NAAATTAGDYALRARVSNNGSVSW 432
K+L+WN +WG ++ + S+++W PD+VL NA A++ ++G V W
Sbjct: 88 KKLTWNPTDWGGVEYIHIPSDQIWIPDIVLYNNADGEPHITITSLAKIDHHGRVVW 143
>X98600-1|CAA67197.1| 511|Caenorhabditis elegans alpha nicotinic
acetylcholine receptorsubunit protein.
Length = 511
Score = 45.6 bits (103), Expect = 4e-05
Identities = 30/112 (26%), Positives = 53/112 (47%), Gaps = 7/112 (6%)
Frame = +1
Query: 118 MIDSLLATYDRE----SPPDSKIVVNLTLHLXHA-NIRESESTVRILADLQMNXIDKRLS 282
+ D L+ Y+R + P+ + + L L L ++ E + + L+ ID++LS
Sbjct: 30 LYDDLMVNYNRHRRPSTSPNKPLTIKLKLRLSQIIDVHEIDQIMTCSVWLKQTWIDRKLS 89
Query: 283 WNAGEWGCXTWL-VSSERLWRPDVVLLNAAATTAG-DYALRARVSNNGSVSW 432
W+ +G L V E +W PD+VL N A + + +A + G V+W
Sbjct: 90 WDPVNYGGVNVLYVPYEMIWVPDIVLYNNADSNYNITISTKATLHYTGEVTW 141
>X98599-1|CAA67196.1| 511|Caenorhabditis elegans alpha nicotinic
acetylcholine receptorsubunit protein.
Length = 511
Score = 45.6 bits (103), Expect = 4e-05
Identities = 30/112 (26%), Positives = 53/112 (47%), Gaps = 7/112 (6%)
Frame = +1
Query: 118 MIDSLLATYDRE----SPPDSKIVVNLTLHLXHA-NIRESESTVRILADLQMNXIDKRLS 282
+ D L+ Y+R + P+ + + L L L ++ E + + L+ ID++LS
Sbjct: 30 LYDDLMVNYNRHRRPSTSPNKPLTIKLKLRLSQIIDVHEIDQIMTCSVWLKQTWIDRKLS 89
Query: 283 WNAGEWGCXTWL-VSSERLWRPDVVLLNAAATTAG-DYALRARVSNNGSVSW 432
W+ +G L V E +W PD+VL N A + + +A + G V+W
Sbjct: 90 WDPVNYGGVNVLYVPYEMIWVPDIVLYNNADSNYNITISTKATLHYTGEVTW 141
>U88175-2|AAB42282.2| 511|Caenorhabditis elegans Uncoordinated
protein 38 protein.
Length = 511
Score = 45.6 bits (103), Expect = 4e-05
Identities = 30/112 (26%), Positives = 53/112 (47%), Gaps = 7/112 (6%)
Frame = +1
Query: 118 MIDSLLATYDRE----SPPDSKIVVNLTLHLXHA-NIRESESTVRILADLQMNXIDKRLS 282
+ D L+ Y+R + P+ + + L L L ++ E + + L+ ID++LS
Sbjct: 30 LYDDLMVNYNRHRRPSTSPNKPLTIKLKLRLSQIIDVHEIDQIMTCSVWLKQTWIDRKLS 89
Query: 283 WNAGEWGCXTWL-VSSERLWRPDVVLLNAAATTAG-DYALRARVSNNGSVSW 432
W+ +G L V E +W PD+VL N A + + +A + G V+W
Sbjct: 90 WDPVNYGGVNVLYVPYEMIWVPDIVLYNNADSNYNITISTKATLHYTGEVTW 141
>AF288374-1|AAK83056.1| 502|Caenorhabditis elegans nicotinic
acetylcholine receptoralpha subunit protein.
Length = 502
Score = 44.8 bits (101), Expect = 8e-05
Identities = 35/115 (30%), Positives = 59/115 (51%), Gaps = 10/115 (8%)
Frame = +1
Query: 118 MIDSLLATYDRESPPDSK----IVVNLTLHLXHA-NIRESESTVRILADLQMNXIDKRLS 282
+ + L+A Y++ P S+ +VV L L ++ E + LQ + +D +L
Sbjct: 30 LFEDLIADYNKLVRPVSENGETLVVTFKLKLSQLLDVHEKNQIMTTNVWLQHSWMDYKLR 89
Query: 283 WNAGEWGCXTWL-VSSERLWRPDVVLLNAAATTAGDYAL----RARVSNNGSVSW 432
W+ E+G L V S+ +W PDVVL N A G+Y + +A+++ NG+V W
Sbjct: 90 WDPVEYGGVEVLYVPSDTIWLPDVVLYNNA---DGNYQVTIMTKAKLTYNGTVEW 141
>AC006708-21|AAF60421.3| 502|Caenorhabditis elegans Uncoordinated
protein 63 protein.
Length = 502
Score = 44.8 bits (101), Expect = 8e-05
Identities = 35/115 (30%), Positives = 59/115 (51%), Gaps = 10/115 (8%)
Frame = +1
Query: 118 MIDSLLATYDRESPPDSK----IVVNLTLHLXHA-NIRESESTVRILADLQMNXIDKRLS 282
+ + L+A Y++ P S+ +VV L L ++ E + LQ + +D +L
Sbjct: 30 LFEDLIADYNKLVRPVSENGETLVVTFKLKLSQLLDVHEKNQIMTTNVWLQHSWMDYKLR 89
Query: 283 WNAGEWGCXTWL-VSSERLWRPDVVLLNAAATTAGDYAL----RARVSNNGSVSW 432
W+ E+G L V S+ +W PDVVL N A G+Y + +A+++ NG+V W
Sbjct: 90 WDPVEYGGVEVLYVPSDTIWLPDVVLYNNA---DGNYQVTIMTKAKLTYNGTVEW 141
>AC006834-2|AAF40009.1| 562|Caenorhabditis elegans Acetylcholine
receptor protein 6 protein.
Length = 562
Score = 44.4 bits (100), Expect = 1e-04
Identities = 26/93 (27%), Positives = 44/93 (47%), Gaps = 3/93 (3%)
Frame = +1
Query: 163 DSKIVVNLTLHLXH-ANIRESESTVRILADLQMNXIDKRLSWNAGEWGCXTWL-VSSERL 336
++ + + L L ++ E + + + L + +D RLSWN E+G T + E L
Sbjct: 28 NNTLTIEFKLRLDQIVDVHEKDQVITLKGTLIHHWLDYRLSWNPDEFGNITLMHFPGEML 87
Query: 337 WRPDVVLL-NAAATTAGDYALRARVSNNGSVSW 432
W PD++L NA + + VS G V+W
Sbjct: 88 WLPDIILYNNAHGSPWVSETTQVHVSFEGRVTW 120
>U39855-1|AAA81080.3| 615|Caenorhabditis elegans Hypothetical
protein F18G5.4 protein.
Length = 615
Score = 43.6 bits (98), Expect = 2e-04
Identities = 21/64 (32%), Positives = 35/64 (54%), Gaps = 3/64 (4%)
Frame = +1
Query: 250 LQMNXIDKRLSWNAGEWG-CXTWLVSSERLWRPDVVLLNAAATT--AGDYALRARVSNNG 420
L +N +D RLSWN W + R+W+PD++L+N A A + V+++G
Sbjct: 165 LNINWMDPRLSWNESLWSEIKAIYIPHARIWKPDIILVNNAIREYYASLVSTDVMVTSDG 224
Query: 421 SVSW 432
+V+W
Sbjct: 225 NVTW 228
>X86403-1|CAA60157.1| 575|Caenorhabditis elegans nicotinic
acetylcholine receptor protein.
Length = 575
Score = 43.2 bits (97), Expect = 2e-04
Identities = 25/77 (32%), Positives = 39/77 (50%), Gaps = 2/77 (2%)
Frame = +1
Query: 208 NIRESESTVRILADLQMNXIDKRLSWNAGEWGCXTWL-VSSERLWRPDVVLL-NAAATTA 381
N+ E ++ L M D +L+WN E+G + L V S+R+W PD+VL NA
Sbjct: 99 NVDEKNQILQTNVWLTMKWNDFQLAWNPAEYGNISNLHVPSDRVWLPDIVLFNNADGNYE 158
Query: 382 GDYALRARVSNNGSVSW 432
+ V ++G V+W
Sbjct: 159 VSFKSNVFVDHHGDVTW 175
>U23525-1|AAK71377.1| 575|Caenorhabditis elegans Acetylcholine
receptor protein 2 protein.
Length = 575
Score = 43.2 bits (97), Expect = 2e-04
Identities = 25/77 (32%), Positives = 39/77 (50%), Gaps = 2/77 (2%)
Frame = +1
Query: 208 NIRESESTVRILADLQMNXIDKRLSWNAGEWGCXTWL-VSSERLWRPDVVLL-NAAATTA 381
N+ E ++ L M D +L+WN E+G + L V S+R+W PD+VL NA
Sbjct: 99 NVDEKNQILQTNVWLTMKWNDFQLAWNPAEYGNISNLHVPSDRVWLPDIVLFNNADGNYE 158
Query: 382 GDYALRARVSNNGSVSW 432
+ V ++G V+W
Sbjct: 159 VSFKSNVFVDHHGDVTW 175
>U88177-6|AAB42293.1| 446|Caenorhabditis elegans Acetylcholine
receptor protein17, isoform a protein.
Length = 446
Score = 40.3 bits (90), Expect = 0.002
Identities = 28/118 (23%), Positives = 59/118 (50%), Gaps = 9/118 (7%)
Frame = +1
Query: 118 MIDSLLATYDRESPP---DSKIVVNLTLHLXHANIR---ESESTVRILADLQMNXIDKRL 279
+I L Y +E P +S N+T+ L I+ E++ + + ++ D+ L
Sbjct: 27 LIKYLFRDYHKELRPVKDESSGPTNVTVQLYFKQIQKVHENDQIITLYCWIEEYWQDEFL 86
Query: 280 SWNAGEWGCXTWL-VSSERLWRPDVVLLNAAATTAGDYALR--ARVSNNGSVSWYKAL 444
+WN ++G L V SE +W+PD+++ N A + ++ ++ + G +S ++A+
Sbjct: 87 TWNPSDFGNIKSLHVPSEMIWKPDLLVYNNANMNIKENEMQTNVQIEHTGKISLFRAI 144
>U88177-5|AAT48618.1| 515|Caenorhabditis elegans Acetylcholine
receptor protein17, isoform b protein.
Length = 515
Score = 40.3 bits (90), Expect = 0.002
Identities = 28/118 (23%), Positives = 59/118 (50%), Gaps = 9/118 (7%)
Frame = +1
Query: 118 MIDSLLATYDRESPP---DSKIVVNLTLHLXHANIR---ESESTVRILADLQMNXIDKRL 279
+I L Y +E P +S N+T+ L I+ E++ + + ++ D+ L
Sbjct: 27 LIKYLFRDYHKELRPVKDESSGPTNVTVQLYFKQIQKVHENDQIITLYCWIEEYWQDEFL 86
Query: 280 SWNAGEWGCXTWL-VSSERLWRPDVVLLNAAATTAGDYALR--ARVSNNGSVSWYKAL 444
+WN ++G L V SE +W+PD+++ N A + ++ ++ + G +S ++A+
Sbjct: 87 TWNPSDFGNIKSLHVPSEMIWKPDLLVYNNANMNIKENEMQTNVQIEHTGKISLFRAI 144
>AY523512-1|AAR98634.1| 499|Caenorhabditis elegans acetylcholine
receptor, nicotinic,alpha 9 like (58.1 kD) alternative
variant a protein.
Length = 499
Score = 40.3 bits (90), Expect = 0.002
Identities = 28/118 (23%), Positives = 59/118 (50%), Gaps = 9/118 (7%)
Frame = +1
Query: 118 MIDSLLATYDRESPP---DSKIVVNLTLHLXHANIR---ESESTVRILADLQMNXIDKRL 279
+I L Y +E P +S N+T+ L I+ E++ + + ++ D+ L
Sbjct: 11 LIKYLFRDYHKELRPVKDESSGPTNVTVQLYFKQIQKVHENDQIITLYCWIEEYWQDEFL 70
Query: 280 SWNAGEWGCXTWL-VSSERLWRPDVVLLNAAATTAGDYALR--ARVSNNGSVSWYKAL 444
+WN ++G L V SE +W+PD+++ N A + ++ ++ + G +S ++A+
Sbjct: 71 TWNPSDFGNIKSLHVPSEMIWKPDLLVYNNANMNIKENEMQTNVQIEHTGKISLFRAI 128
>AC084197-42|AAU87806.2| 544|Caenorhabditis elegans Acetylcholine
receptor protein 25 protein.
Length = 544
Score = 40.3 bits (90), Expect = 0.002
Identities = 38/137 (27%), Positives = 60/137 (43%), Gaps = 7/137 (5%)
Frame = +1
Query: 43 CYLLSPHLCYS*CGRMRKTQHHCPIMIDSLLATYDR-ESPPDSK---IVVNLTLHLXH-A 207
C+L+ GR TQ + LL Y+ E P ++ ++V + L L
Sbjct: 4 CWLILKLCLLLALGRNGITQKSEGDLYTELLEDYEPLERPIENSSEAVMVKMGLVLQQIV 63
Query: 208 NIRESESTVRILADLQMNXIDKRLSWNAGEWGCXTWL-VSSERLWRPDVVLLNAAATTAG 384
++ E V + A L+ + +D L W ++G T L +LW PDV++ N+A
Sbjct: 64 DVDEKNQVVDVNAWLKFSWVDYSLKWKPEDYGGVTDLRFRKGQLWTPDVLMYNSADPQFD 123
Query: 385 D-YALRARVSNNGSVSW 432
YA V NG V+W
Sbjct: 124 SRYASNLLVYPNGLVNW 140
>Z81071-1|CAB03014.2| 510|Caenorhabditis elegans Hypothetical
protein F28F8.1 protein.
Length = 510
Score = 39.9 bits (89), Expect = 0.002
Identities = 36/150 (24%), Positives = 68/150 (45%), Gaps = 12/150 (8%)
Frame = +1
Query: 31 LYYSCYLLSPHLCYS*CGRMRKTQH--HCPI--MIDSLLATYDRESPP----DSKIVVNL 186
L Y C+L+ + S R+ T H P+ + + L Y +E P + V +
Sbjct: 2 LIYPCFLILWQILSS--HRVHATSHPARTPMRNLYEHLFLDYVKEIRPVRNESESLKVEI 59
Query: 187 TLHLXHA-NIRESESTVRILADLQMNXIDKRLSWNAGEWGCXTWL-VSSERLWRPDVVLL 360
L + E + V I L++ ID+ L+W+ ++G + + V + ++W+PDV++
Sbjct: 60 KFWLKQILKVDERDQIVNIYCWLELYWIDETLTWDPKKFGNLSRIHVPAHKIWKPDVLVY 119
Query: 361 NAAATTA--GDYALRARVSNNGSVSWYKAL 444
N A + A V N G V ++++
Sbjct: 120 NNANMNVEENEMETNAIVDNTGRVMLFRSM 149
>AY523513-1|AAR98635.1| 510|Caenorhabditis elegans acetylcholine
receptor, one ofnine alpha a7-like nicotinic
acetylcholine receptor subunits(58.6 kD) (acr-18)
protein.
Length = 510
Score = 39.9 bits (89), Expect = 0.002
Identities = 36/150 (24%), Positives = 68/150 (45%), Gaps = 12/150 (8%)
Frame = +1
Query: 31 LYYSCYLLSPHLCYS*CGRMRKTQH--HCPI--MIDSLLATYDRESPP----DSKIVVNL 186
L Y C+L+ + S R+ T H P+ + + L Y +E P + V +
Sbjct: 2 LIYPCFLILWQILSS--HRVHATSHPARTPMRNLYEHLFLDYVKEIRPVRNESESLKVEI 59
Query: 187 TLHLXHA-NIRESESTVRILADLQMNXIDKRLSWNAGEWGCXTWL-VSSERLWRPDVVLL 360
L + E + V I L++ ID+ L+W+ ++G + + V + ++W+PDV++
Sbjct: 60 KFWLKQILKVDERDQIVNIYCWLELYWIDETLTWDPKKFGNLSRIHVPAHKIWKPDVLVY 119
Query: 361 NAAATTA--GDYALRARVSNNGSVSWYKAL 444
N A + A V N G V ++++
Sbjct: 120 NNANMNVEENEMETNAIVDNTGRVMLFRSM 149
>AL110479-15|CAB54361.2| 400|Caenorhabditis elegans Hypothetical
protein Y105C5B.16 protein.
Length = 400
Score = 39.9 bits (89), Expect = 0.002
Identities = 18/71 (25%), Positives = 35/71 (49%), Gaps = 1/71 (1%)
Frame = +1
Query: 142 YDRESPPDSKIVVNLTLHLXHANIRESESTVRILADLQMNXIDKRLSWNAGEWGCXTWL- 318
YD E+P + L +L ++E + + ++ ++ D RLSWNA W T +
Sbjct: 64 YDNEAPKRYNYTIFL-YYLKLVEVQEPQEKISVVMEIMEYWYDARLSWNASAWQNTTMIY 122
Query: 319 VSSERLWRPDV 351
+ +++W P +
Sbjct: 123 MKQDKVWSPTI 133
>AF038614-9|AAB92062.2| 445|Caenorhabditis elegans Hypothetical
protein F15E6.2 protein.
Length = 445
Score = 39.5 bits (88), Expect = 0.003
Identities = 19/81 (23%), Positives = 41/81 (50%), Gaps = 1/81 (1%)
Frame = +1
Query: 139 TYDRESPPDSKIVVNLTLHLXHANIRESESTVRILADLQMNXIDKRLSWNAGEWGCXTWL 318
TY + +K+V ++ + + I E V++ ++ D +SW+ +WG +WL
Sbjct: 74 TYQNATDNKTKVVRVESVRINNVEIDERRQNVKVFGRFVLSWNDTMVSWDKEQWG-LSWL 132
Query: 319 -VSSERLWRPDVVLLNAAATT 378
++W P++V +N +T+
Sbjct: 133 NFYWIQIWTPNIVQINGGSTS 153
>AF022973-5|AAC25797.4| 479|Caenorhabditis elegans Acetylcholine
receptor protein 15 protein.
Length = 479
Score = 39.5 bits (88), Expect = 0.003
Identities = 31/112 (27%), Positives = 54/112 (48%), Gaps = 7/112 (6%)
Frame = +1
Query: 118 MIDSLLATYDRESPP--DSK--IVVNLTLHLXHA-NIRESESTVRILADLQMNXIDKRLS 282
+I+ L++ Y RE P DS +VV+L + L N+ E E + + A L+ D+ L
Sbjct: 25 LINDLMSGYVREERPTLDSSKPVVVSLGVFLQQIINLSEKEEQLEVNAWLKFQWRDENLR 84
Query: 283 WNAGEWGCXTWLVSS-ERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVSW 432
W + T L + LW PD++L N+ + Y + + G+++W
Sbjct: 85 WEPTAYENVTDLRHPPDALWTPDILLYNSVDSEFDSSYKVNLVNYHTGNINW 136
>X83887-1|CAA58764.1| 498|Caenorhabditis elegans alpha-1 subunit of
nicotinic acetylcholinereceptor protein.
Length = 498
Score = 38.3 bits (85), Expect = 0.007
Identities = 29/112 (25%), Positives = 49/112 (43%), Gaps = 7/112 (6%)
Frame = +1
Query: 118 MIDSLLATYDRESPPDSKIVVNLTLHLXHA-----NIRESESTVRILADLQMNXIDKRLS 282
+ + L+ Y+ P + +T+HL A ++ E V + A L D L
Sbjct: 26 LYEDLMRNYNNLERPVANHSEPVTVHLKVALQQIIDVDEKNQVVYVNAWLDYTWNDYNLV 85
Query: 283 WNAGEWGCXTWL-VSSERLWRPDVVLLNAAATT-AGDYALRARVSNNGSVSW 432
W+ E+G T + + ++W+PDV+L N+ T Y V + G V W
Sbjct: 86 WDKAEYGNITDVRFPAGKIWKPDVLLYNSVDTNFDSTYQTNMIVYSTGLVHW 137
>AY523511-1|AAR98633.1| 498|Caenorhabditis elegans acetylcholine
receptor (57.1 kD)alternative variant 1 protein.
Length = 498
Score = 38.3 bits (85), Expect = 0.007
Identities = 29/112 (25%), Positives = 49/112 (43%), Gaps = 7/112 (6%)
Frame = +1
Query: 118 MIDSLLATYDRESPPDSKIVVNLTLHLXHA-----NIRESESTVRILADLQMNXIDKRLS 282
+ + L+ Y+ P + +T+HL A ++ E V + A L D L
Sbjct: 26 LYEDLMRNYNNLERPVANHSEPVTVHLKVALQQIIDVDEKNQVVYVNAWLDYTWNDYNLV 85
Query: 283 WNAGEWGCXTWL-VSSERLWRPDVVLLNAAATT-AGDYALRARVSNNGSVSW 432
W+ E+G T + + ++W+PDV+L N+ T Y V + G V W
Sbjct: 86 WDKAEYGNITDVRFPAGKIWKPDVLLYNSVDTNFDSTYQTNMIVYSTGLVHW 137
>AF022973-7|AAN84815.1| 480|Caenorhabditis elegans Acetylcholine
receptor protein16, isoform b protein.
Length = 480
Score = 38.3 bits (85), Expect = 0.007
Identities = 29/112 (25%), Positives = 49/112 (43%), Gaps = 7/112 (6%)
Frame = +1
Query: 118 MIDSLLATYDRESPPDSKIVVNLTLHLXHA-----NIRESESTVRILADLQMNXIDKRLS 282
+ + L+ Y+ P + +T+HL A ++ E V + A L D L
Sbjct: 26 LYEDLMRNYNNLERPVANHSEPVTVHLKVALQQIIDVDEKNQVVYVNAWLDYTWNDYNLV 85
Query: 283 WNAGEWGCXTWL-VSSERLWRPDVVLLNAAATT-AGDYALRARVSNNGSVSW 432
W+ E+G T + + ++W+PDV+L N+ T Y V + G V W
Sbjct: 86 WDKAEYGNITDVRFPAGKIWKPDVLLYNSVDTNFDSTYQTNMIVYSTGLVHW 137
>AF022973-6|AAC25796.1| 498|Caenorhabditis elegans Acetylcholine
receptor protein16, isoform a protein.
Length = 498
Score = 38.3 bits (85), Expect = 0.007
Identities = 29/112 (25%), Positives = 49/112 (43%), Gaps = 7/112 (6%)
Frame = +1
Query: 118 MIDSLLATYDRESPPDSKIVVNLTLHLXHA-----NIRESESTVRILADLQMNXIDKRLS 282
+ + L+ Y+ P + +T+HL A ++ E V + A L D L
Sbjct: 26 LYEDLMRNYNNLERPVANHSEPVTVHLKVALQQIIDVDEKNQVVYVNAWLDYTWNDYNLV 85
Query: 283 WNAGEWGCXTWL-VSSERLWRPDVVLLNAAATT-AGDYALRARVSNNGSVSW 432
W+ E+G T + + ++W+PDV+L N+ T Y V + G V W
Sbjct: 86 WDKAEYGNITDVRFPAGKIWKPDVLLYNSVDTNFDSTYQTNMIVYSTGLVHW 137
>AF016445-13|AAC69055.3| 371|Caenorhabditis elegans Ligand-gated
ion channel protein 1 protein.
Length = 371
Score = 38.3 bits (85), Expect = 0.007
Identities = 25/97 (25%), Positives = 47/97 (48%), Gaps = 4/97 (4%)
Frame = +1
Query: 157 PPDSKIVVNLTLHLXHANIRESESTVRILADLQMNXIDKRLSWNAGEWGCXTWLVSSER- 333
PP +++ + + + L ++ E E V L D D+RL WN E+G + + +R
Sbjct: 51 PPITELKLTMAM-LKLVDVVEVEEKVTFLFDYLAEWTDQRLKWNPLEYGGISHIYVPQRM 109
Query: 334 LWRPDVVLLNAAAT---TAGDYALRARVSNNGSVSWY 435
+W P+V + +A + D A ++ NG+ +Y
Sbjct: 110 IWLPEVTIADAHEVKFFESDDAPRTAWINYNGTTGFY 146
>Z81093-1|CAB03148.2| 507|Caenorhabditis elegans Hypothetical
protein F09E8.7 protein.
Length = 507
Score = 37.9 bits (84), Expect = 0.009
Identities = 27/96 (28%), Positives = 44/96 (45%), Gaps = 2/96 (2%)
Frame = +1
Query: 151 ESPPDSKIVVNLTLHLXHANIRESESTVRILADLQMNXIDKRLSWNAGEWGCXTWL-VSS 327
E P KI + L L + N+ E E + L M D +L W+ ++ T + V+
Sbjct: 61 ELPMIVKIGMQLVLLI---NVDEKEQVMHTNVWLTMKWDDFQLKWDPRDYANITQIRVAP 117
Query: 328 ERLWRPDVVLL-NAAATTAGDYALRARVSNNGSVSW 432
E++W PD+VL NA + + + G+V W
Sbjct: 118 EKVWLPDIVLFNNADGNYEVSFMCNVLILSTGTVLW 153
>X98601-1|CAA67198.1| 507|Caenorhabditis elegans non-alpha
nicotinic acetylcholinereceptor subunit protein.
Length = 507
Score = 37.9 bits (84), Expect = 0.009
Identities = 27/96 (28%), Positives = 44/96 (45%), Gaps = 2/96 (2%)
Frame = +1
Query: 151 ESPPDSKIVVNLTLHLXHANIRESESTVRILADLQMNXIDKRLSWNAGEWGCXTWL-VSS 327
E P KI + L L + N+ E E + L M D +L W+ ++ T + V+
Sbjct: 61 ELPMIVKIGMQLVLLI---NVDEKEQVMHTNVWLTMKWDDFQLKWDPRDYANITQIRVAP 117
Query: 328 ERLWRPDVVLL-NAAATTAGDYALRARVSNNGSVSW 432
E++W PD+VL NA + + + G+V W
Sbjct: 118 EKVWLPDIVLFNNADGNYEVSFMCNVLILSTGTVLW 153
>X98246-1|CAA66902.1| 507|Caenorhabditis elegans nicotinic
acetylcholine receptor protein.
Length = 507
Score = 37.9 bits (84), Expect = 0.009
Identities = 27/96 (28%), Positives = 44/96 (45%), Gaps = 2/96 (2%)
Frame = +1
Query: 151 ESPPDSKIVVNLTLHLXHANIRESESTVRILADLQMNXIDKRLSWNAGEWGCXTWL-VSS 327
E P KI + L L + N+ E E + L M D +L W+ ++ T + V+
Sbjct: 61 ELPMIVKIGMQLVLLI---NVDEKEQVMHTNVWLTMKWDDFQLKWDPRDYANITQIRVAP 117
Query: 328 ERLWRPDVVLL-NAAATTAGDYALRARVSNNGSVSW 432
E++W PD+VL NA + + + G+V W
Sbjct: 118 EKVWLPDIVLFNNADGNYEVSFMCNVLILSTGTVLW 153
>AL110490-4|CAB54450.1| 474|Caenorhabditis elegans Hypothetical
protein Y48B6A.4 protein.
Length = 474
Score = 37.9 bits (84), Expect = 0.009
Identities = 30/110 (27%), Positives = 50/110 (45%), Gaps = 7/110 (6%)
Frame = +1
Query: 118 MIDSLLATYDRESPP--DSKIVVNLTLHLXH---ANIRESESTVRILADLQMNXIDKRLS 282
++ L YD P D + VN+ L L ++ E + ++ Q D +L
Sbjct: 28 LLKDLREGYDPVERPVADHRKPVNVKLRLILQQLVDVDERNQVITLVVWNQYTWNDYKLR 87
Query: 283 WNAGEWGCXTWL-VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSV 426
W+ E+G T L + LW+PD++L N+A + + VS+NG V
Sbjct: 88 WSPEEYGNITTLQIPHGTLWKPDILLFNSANEHFDASFPVHMVVSSNGDV 137
>Z50029-2|CAA90341.3| 537|Caenorhabditis elegans Hypothetical
protein ZC504.2 protein.
Length = 537
Score = 37.5 bits (83), Expect = 0.012
Identities = 17/41 (41%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Frame = +1
Query: 250 LQMNXIDKRLSWNAGEWGCXTWL-VSSERLWRPDVVLLNAA 369
L+M D RL W+ G WG L V +++W PD++L N A
Sbjct: 77 LEMQWFDYRLMWDPGRWGKIRKLHVPVDQIWIPDILLYNNA 117
>Z67737-1|CAA91536.2| 399|Caenorhabditis elegans Hypothetical
protein T01H10.1 protein.
Length = 399
Score = 37.1 bits (82), Expect = 0.015
Identities = 24/83 (28%), Positives = 39/83 (46%), Gaps = 8/83 (9%)
Frame = +1
Query: 121 IDSLLATYDRESP----PDSKIVVNLTLHLXHAN---IRESESTVRILADLQMNXIDKRL 279
+ + A +D P PD+ N TL L + + E E V ++ +L D RL
Sbjct: 50 VSPVYAWFDTSKPLGYDPDAPQRYNYTLFLYNLKLIQVNEPEEQVSVVLELMEYWYDPRL 109
Query: 280 SWNAGEWGCXTWLVS-SERLWRP 345
SWNA ++ T + + E++W P
Sbjct: 110 SWNASDYKNVTAIFTRQEKIWSP 132
>Z92837-3|CAB07402.3| 502|Caenorhabditis elegans Hypothetical
protein R03E1.3 protein.
Length = 502
Score = 36.3 bits (80), Expect = 0.027
Identities = 18/65 (27%), Positives = 32/65 (49%), Gaps = 1/65 (1%)
Frame = +1
Query: 178 VNLTLHLXHAN-IRESESTVRILADLQMNXIDKRLSWNAGEWGCXTWLVSSERLWRPDVV 354
VN+ L + H + E E T + + ID+ + W+A + +S+ LW+P +
Sbjct: 54 VNVFLSIAHVEKVDEHEQTALVHGHIWATWIDEYMQWDAKKENVTKLTISAHSLWQPALA 113
Query: 355 LLNAA 369
L N+A
Sbjct: 114 LYNSA 118
>Z68118-7|CAA92184.2| 573|Caenorhabditis elegans Hypothetical
protein R01E6.4 protein.
Length = 573
Score = 35.5 bits (78), Expect = 0.047
Identities = 22/63 (34%), Positives = 33/63 (52%), Gaps = 2/63 (3%)
Frame = +1
Query: 250 LQMNXIDKRLSWNAGEWG-CXTWLVSSERLWRPDVVLLNAAATTAGDYALR-ARVSNNGS 423
L+M D +L+W ++G T + S+ +W PD+VL N AA L A V+ G+
Sbjct: 90 LEMKWNDAKLTWTPEKYGGLKTLHIPSDFIWTPDLVLYNNAAGDPDITILTDALVTFEGN 149
Query: 424 VSW 432
V W
Sbjct: 150 VYW 152
>AF187013-1|AAG35183.1| 573|Caenorhabditis elegans nicotinic
acetylcholine receptor-like subunit ACR-12 protein.
Length = 573
Score = 35.5 bits (78), Expect = 0.047
Identities = 22/63 (34%), Positives = 33/63 (52%), Gaps = 2/63 (3%)
Frame = +1
Query: 250 LQMNXIDKRLSWNAGEWG-CXTWLVSSERLWRPDVVLLNAAATTAGDYALR-ARVSNNGS 423
L+M D +L+W ++G T + S+ +W PD+VL N AA L A V+ G+
Sbjct: 90 LEMKWNDAKLTWTPEKYGGLKTLHIPSDFIWTPDLVLYNNAAGDPDITILTDALVTFEGN 149
Query: 424 VSW 432
V W
Sbjct: 150 VYW 152
>AC006631-5|AAF39790.3| 469|Caenorhabditis elegans Acetylcholine
receptor protein 21 protein.
Length = 469
Score = 35.5 bits (78), Expect = 0.047
Identities = 23/86 (26%), Positives = 45/86 (52%), Gaps = 6/86 (6%)
Frame = +1
Query: 130 LLATYDRESPPD--SKIVVNLTLHLXHANIRESESTVRILAD---LQMNXIDKRLSWNAG 294
LL Y+ E P SK +N+T I + + +IL ++++ +D +L W+
Sbjct: 7 LLYDYNNEVRPSVHSKEPINVTFVFSLTQIIDVDERNQILTTNSWIRLHWVDYKLVWDPR 66
Query: 295 EWGCXTWL-VSSERLWRPDVVLLNAA 369
+ T + + S+++W+PD++L N A
Sbjct: 67 LYQNVTRIHIPSDKIWKPDIILYNNA 92
>Z70266-4|CAA94206.3| 534|Caenorhabditis elegans Hypothetical
protein C40C9.2 protein.
Length = 534
Score = 35.1 bits (77), Expect = 0.062
Identities = 22/90 (24%), Positives = 45/90 (50%), Gaps = 5/90 (5%)
Frame = +1
Query: 172 IVVNLTLHLXHA-NIRESESTVRILADLQMNXIDKRLSWNAGEWGCXTWLV---SSERLW 339
+VV++ ++L ++ E + ++A ++ D +L W+ E+G + ++ +W
Sbjct: 53 LVVSVKIYLQQILDVDEKNQVITLVAWIEYQWTDYKLKWDPSEYGGIKDIRIPGNANAIW 112
Query: 340 RPDVVLLNAA-ATTAGDYALRARVSNNGSV 426
+PDV+L N+A Y + VS G V
Sbjct: 113 KPDVLLYNSADENFDSTYPVNYVVSYTGDV 142
>Z66500-2|CAA91304.2| 500|Caenorhabditis elegans Hypothetical
protein T05C12.2 protein.
Length = 500
Score = 35.1 bits (77), Expect = 0.062
Identities = 24/80 (30%), Positives = 42/80 (52%), Gaps = 7/80 (8%)
Frame = +1
Query: 208 NIRESESTVRILADLQMNXIDKRLSWNAGEWGCXTWLV------SSERLWRPDVVLLNAA 369
++ E + ILA + + D +L+W+ +G + +S +LWRPDV+L N+
Sbjct: 59 DVDEKNQVMSILAYMDYHWNDYKLTWDPKLFGGIRDVRFSGDDDASFKLWRPDVLLFNSV 118
Query: 370 ATT-AGDYALRARVSNNGSV 426
+ + Y+ R VS+NG V
Sbjct: 119 SESFDSTYSSRFIVSSNGDV 138
>Z80220-5|CAB02308.1| 493|Caenorhabditis elegans Hypothetical
protein T08G11.5 protein.
Length = 493
Score = 34.7 bits (76), Expect = 0.082
Identities = 21/90 (23%), Positives = 41/90 (45%), Gaps = 3/90 (3%)
Frame = +1
Query: 172 IVVNLTLHLXHA-NIRESESTVRILADLQMNXIDKRLSWNAGEWGCXTWL-VSSERLWRP 345
++V + L L N+ E + + L + D ++ WN +G + VS +++W P
Sbjct: 56 LIVKMALQLVLLINVDEKDQVMHTNVWLTLQWHDFQMKWNPVNYGEIKQIRVSPDKVWLP 115
Query: 346 DVVLL-NAAATTAGDYALRARVSNNGSVSW 432
D+VL NA + +++ G + W
Sbjct: 116 DIVLFNNADGNYEVSFMCNVVINHKGDMLW 145
>X83888-1|CAA58765.1| 493|Caenorhabditis elegans beta-1 subunit of
nicotinic acetylcholinereceptor protein.
Length = 493
Score = 34.7 bits (76), Expect = 0.082
Identities = 21/90 (23%), Positives = 41/90 (45%), Gaps = 3/90 (3%)
Frame = +1
Query: 172 IVVNLTLHLXHA-NIRESESTVRILADLQMNXIDKRLSWNAGEWGCXTWL-VSSERLWRP 345
++V + L L N+ E + + L + D ++ WN +G + VS +++W P
Sbjct: 56 LIVKMALQLVLLINVDEKDQVMHTNVWLTLQWHDFQMKWNPVNYGEIKQIRVSPDKVWLP 115
Query: 346 DVVLL-NAAATTAGDYALRARVSNNGSVSW 432
D+VL NA + +++ G + W
Sbjct: 116 DIVLFNNADGNYEVSFMCNVVINHKGDMLW 145
>U81144-1|AAB39358.1| 493|Caenorhabditis elegans non-alpha
nicotinic acetylcholinereceptor subunit precursor
protein.
Length = 493
Score = 34.7 bits (76), Expect = 0.082
Identities = 21/90 (23%), Positives = 41/90 (45%), Gaps = 3/90 (3%)
Frame = +1
Query: 172 IVVNLTLHLXHA-NIRESESTVRILADLQMNXIDKRLSWNAGEWGCXTWL-VSSERLWRP 345
++V + L L N+ E + + L + D ++ WN +G + VS +++W P
Sbjct: 56 LIVKMALQLVLLINVDEKDQVMHTNVWLTLQWHDFQMKWNPVNYGEIKQIRVSPDKVWLP 115
Query: 346 DVVLL-NAAATTAGDYALRARVSNNGSVSW 432
D+VL NA + +++ G + W
Sbjct: 116 DIVLFNNADGNYEVSFMCNVVINHKGDMLW 145
>AC006808-1|AAF60813.1| 486|Caenorhabditis elegans Hypothetical
protein Y58G8A.1 protein.
Length = 486
Score = 34.7 bits (76), Expect = 0.082
Identities = 24/87 (27%), Positives = 38/87 (43%), Gaps = 4/87 (4%)
Frame = +1
Query: 178 VNLTLHLXHAN-IRESESTVRILADLQMNXIDKRLSWNAGEWGCXTWLVSSERLWRPDVV 354
V + L++ H + E E T + L + D+ L W T ++S +LW+P +
Sbjct: 54 VAVYLNIAHVEKVDEHEQTALVHGHLMASWTDEYLKWERKATNISTLSIASSKLWQPALQ 113
Query: 355 LLNAAATTAGDY---ALRARVSNNGSV 426
L N+A + L A V N G V
Sbjct: 114 LYNSARGNSWSLYLTGLPAIVYNTGKV 140
>U88167-6|AAB42223.1| 461|Caenorhabditis elegans Acetylcholine
receptor protein 11 protein.
Length = 461
Score = 34.3 bits (75), Expect = 0.11
Identities = 18/58 (31%), Positives = 30/58 (51%), Gaps = 3/58 (5%)
Frame = +1
Query: 208 NIRESESTVRILADLQMNXIDKRLSWNAGEWGCXTWLV---SSERLWRPDVVLLNAAA 372
++ E V + A L D +L W ++G + SS+ +W+PDV+L N+AA
Sbjct: 64 DVDEKNQIVSVNAWLSYTWFDHKLQWEPKKYGGIQDIRFPGSSDHIWKPDVLLYNSAA 121
>Z67737-5|CAA91541.2| 401|Caenorhabditis elegans Hypothetical
protein T01H10.6 protein.
Length = 401
Score = 33.9 bits (74), Expect = 0.14
Identities = 17/55 (30%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
Frame = +1
Query: 184 LTLHLXHANIRESESTVRILADLQMNXIDKRLSWNAGEW-GCXTWLVSSERLWRP 345
L +L ++E E V ++ +L D RLSWN+ + T V E++W P
Sbjct: 79 LLYYLKLVEVQEPEEKVSVVLELVEQWYDPRLSWNSSLYSNIPTVFVRQEKVWSP 133
>U28735-8|AAF99957.2| 434|Caenorhabditis elegans Acetylcholine
receptor protein 22 protein.
Length = 434
Score = 33.9 bits (74), Expect = 0.14
Identities = 19/73 (26%), Positives = 31/73 (42%), Gaps = 1/73 (1%)
Frame = +1
Query: 211 IRESESTVRILADLQMNXIDKRLSWNAGEW-GCXTWLVSSERLWRPDVVLLNAAATTAGD 387
+ E ++IL + D L+W+ EW G ++ ++W PD + N T
Sbjct: 75 VNEQNEQIKILLWFPQSWKDDYLTWDPKEWNGIERIIIPKSQIWIPDGYIFNTVEETEPL 134
Query: 388 YALRARVSNNGSV 426
ARV +G V
Sbjct: 135 ENHNARVRYDGRV 147
>AY519852-1|AAR89633.1| 434|Caenorhabditis elegans acetylcholine
receptor (51.1 kD)(acr-22) protein.
Length = 434
Score = 33.9 bits (74), Expect = 0.14
Identities = 19/73 (26%), Positives = 31/73 (42%), Gaps = 1/73 (1%)
Frame = +1
Query: 211 IRESESTVRILADLQMNXIDKRLSWNAGEW-GCXTWLVSSERLWRPDVVLLNAAATTAGD 387
+ E ++IL + D L+W+ EW G ++ ++W PD + N T
Sbjct: 75 VNEQNEQIKILLWFPQSWKDDYLTWDPKEWNGIERIIIPKSQIWIPDGYIFNTVEETEPL 134
Query: 388 YALRARVSNNGSV 426
ARV +G V
Sbjct: 135 ENHNARVRYDGRV 147
>U53337-6|AAA96188.2| 510|Caenorhabditis elegans Acetylcholine
receptor protein 10 protein.
Length = 510
Score = 33.1 bits (72), Expect = 0.25
Identities = 19/71 (26%), Positives = 35/71 (49%), Gaps = 4/71 (5%)
Frame = +1
Query: 232 VRILADLQMNXIDKRLSWNAGEWGCXT---WLVSSERLWRPDVVLLNAAATT-AGDYALR 399
+ + A L+ +D RL W+ ++ T + ++WRPD++L N+A+ +
Sbjct: 12 IEVNAWLKYVWMDYRLQWDPLQYDNITSIRFAGGENQIWRPDILLYNSASEDFDSSFKSN 71
Query: 400 ARVSNNGSVSW 432
V N G V+W
Sbjct: 72 EVVYNTGEVNW 82
>Z93778-6|CAB07843.2| 554|Caenorhabditis elegans Hypothetical
protein C31H5.3 protein.
Length = 554
Score = 32.7 bits (71), Expect = 0.33
Identities = 18/63 (28%), Positives = 33/63 (52%), Gaps = 2/63 (3%)
Frame = +1
Query: 250 LQMNXIDKRLSWNAGEWGCXTWL-VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGS 423
L+M+ D L+W+ E+G + + +W+PDV+L N+ + + A V G+
Sbjct: 77 LRMSWTDHYLTWDPSEFGNIKEVRLPINNIWKPDVLLYNSVDQQFDSTWPVNAVVLYTGN 136
Query: 424 VSW 432
V+W
Sbjct: 137 VTW 139
>AY523514-1|AAR98636.1| 554|Caenorhabditis elegans acetylcholine
receptor (63.2 kD)(acr-19) protein.
Length = 554
Score = 32.7 bits (71), Expect = 0.33
Identities = 18/63 (28%), Positives = 33/63 (52%), Gaps = 2/63 (3%)
Frame = +1
Query: 250 LQMNXIDKRLSWNAGEWGCXTWL-VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGS 423
L+M+ D L+W+ E+G + + +W+PDV+L N+ + + A V G+
Sbjct: 77 LRMSWTDHYLTWDPSEFGNIKEVRLPINNIWKPDVLLYNSVDQQFDSTWPVNAVVLYTGN 136
Query: 424 VSW 432
V+W
Sbjct: 137 VTW 139
>AC024207-2|AAL77193.1| 425|Caenorhabditis elegans Hypothetical
protein Y74E4A.1a protein.
Length = 425
Score = 32.7 bits (71), Expect = 0.33
Identities = 15/35 (42%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = +1
Query: 250 LQMNXIDKRLSWNAGEWGCXTW-LVSSERLWRPDV 351
L+++ D+RL WN EW L S RLW PD+
Sbjct: 107 LKLSWKDRRLRWNPEEWKTEVLRLKSMGRLWSPDI 141
>AC024207-1|AAL77194.1| 428|Caenorhabditis elegans Hypothetical
protein Y74E4A.1b protein.
Length = 428
Score = 32.7 bits (71), Expect = 0.33
Identities = 15/35 (42%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = +1
Query: 250 LQMNXIDKRLSWNAGEWGCXTW-LVSSERLWRPDV 351
L+++ D+RL WN EW L S RLW PD+
Sbjct: 107 LKLSWKDRRLRWNPEEWKTEVLRLKSMGRLWSPDI 141
>Z99281-1|CAB16504.2| 439|Caenorhabditis elegans Hypothetical
protein Y57G11C.2 protein.
Length = 439
Score = 32.3 bits (70), Expect = 0.44
Identities = 21/90 (23%), Positives = 41/90 (45%), Gaps = 6/90 (6%)
Frame = +1
Query: 124 DSLLATYDRESPPDSK----IVVNLTLHLXHA-NIRESESTVRILADLQMNXIDKRLSWN 288
D L+ YD P + +++N++++ + +E T+ ++ + D+ L WN
Sbjct: 33 DVLMEGYDSSIRPVNNERDILIINISMNTMSVLTLDPAEETINFSSEFILQWKDEFLFWN 92
Query: 289 AGEWGCXTWLVSSER-LWRPDVVLLNAAAT 375
++ TWL E LW PD + + T
Sbjct: 93 KSDYNI-TWLKLKESFLWTPDTTVSTSIDT 121
>Y08637-1|CAA69927.1| 487|Caenorhabditis elegans nicotinic
acetylcholine receptorsubunit ACR-3 protein.
Length = 487
Score = 32.3 bits (70), Expect = 0.44
Identities = 22/83 (26%), Positives = 38/83 (45%), Gaps = 1/83 (1%)
Frame = +1
Query: 124 DSLLATYDRESPPDSKIVVNLTLHLXHANIRESESTVRILADLQMNXIDKRLSWNAGEW- 300
+SL+ S P ++ +L L N+ E ++ M D ++ W+ E+
Sbjct: 38 NSLIRPVLNASSPPIEVFFSLAFVLL-INVDEKNQIMQTNVWPTMKWNDYQMQWDPREFD 96
Query: 301 GCXTWLVSSERLWRPDVVLLNAA 369
G T V +++W PD+VL N A
Sbjct: 97 GIKTIRVPPDKVWLPDIVLFNNA 119
>U23525-2|AAK71378.1| 487|Caenorhabditis elegans Acetylcholine
receptor protein 3 protein.
Length = 487
Score = 32.3 bits (70), Expect = 0.44
Identities = 22/83 (26%), Positives = 38/83 (45%), Gaps = 1/83 (1%)
Frame = +1
Query: 124 DSLLATYDRESPPDSKIVVNLTLHLXHANIRESESTVRILADLQMNXIDKRLSWNAGEW- 300
+SL+ S P ++ +L L N+ E ++ M D ++ W+ E+
Sbjct: 38 NSLIRPVLNASSPPIEVFFSLAFVLL-INVDEKNQIMQTNVWPTMKWNDYQMQWDPREFD 96
Query: 301 GCXTWLVSSERLWRPDVVLLNAA 369
G T V +++W PD+VL N A
Sbjct: 97 GIKTIRVPPDKVWLPDIVLFNNA 119
>AF047656-7|AAC05108.2| 462|Caenorhabditis elegans Ligand-gated ion
channel protein 6 protein.
Length = 462
Score = 31.9 bits (69), Expect = 0.58
Identities = 20/79 (25%), Positives = 37/79 (46%), Gaps = 4/79 (5%)
Frame = +1
Query: 139 TYDRE-SPPDSKIVVNLTLH-LXHANIRESESTVRILADLQMNXIDKRLSWNAGEWGCXT 312
TYD + P D +V +T + ++ +++ T++ + + D L WN
Sbjct: 39 TYDVDMKPSDDLTMVTITPNTFILLSMDQTQETIQYSEEFLLRWYDPILHWNQSAVSYEN 98
Query: 313 -WL-VSSERLWRPDVVLLN 363
W+ +S+ R W PDV+ N
Sbjct: 99 DWIKISASRAWIPDVIFTN 117
>U28929-5|AAA68348.2| 438|Caenorhabditis elegans Gaba/glycine
receptor family (seegbr) protein 3 protein.
Length = 438
Score = 31.1 bits (67), Expect = 1.0
Identities = 28/98 (28%), Positives = 47/98 (47%), Gaps = 7/98 (7%)
Frame = +1
Query: 103 HHCPIMIDSLLATYDRESPPDSKIVVNLTLHLXHANIRE-SESTVRILADLQMNXI--DK 273
+H ++ LL YD+ P + V +++ L +I SE + +AD+ + + D
Sbjct: 34 NHRKSILTDLLQDYDKTMVPSNNSV-QVSVELTVQDISSISEISSSFIADVWFSQVWYDP 92
Query: 274 RLSWNAGEWGCXTWL----VSSERLWRPDVVLLNAAAT 375
RL + C T L SERLW P+V +N+ +T
Sbjct: 93 RLEYR--NISCKTNLSLDSYVSERLWTPNVCFVNSKST 128
>Z99281-29|CAH04731.2| 438|Caenorhabditis elegans Hypothetical
protein Y57G11C.49 protein.
Length = 438
Score = 30.7 bits (66), Expect = 1.3
Identities = 21/90 (23%), Positives = 39/90 (43%), Gaps = 6/90 (6%)
Frame = +1
Query: 124 DSLLATYDRESPP----DSKIVVNLTLH-LXHANIRESESTVRILADLQMNXIDKRLSWN 288
D L+ YD P + +N++++ + + +E T+ + + D+ L WN
Sbjct: 33 DVLMEGYDSSIRPVINERDTLFINISINSMSFLTLDPAEETINFSGEFILQWKDEFLFWN 92
Query: 289 AGEWGCXTWLVSSER-LWRPDVVLLNAAAT 375
++ TWL E LW PD + + T
Sbjct: 93 KSDYNI-TWLKLKESFLWTPDTTVSTSIDT 121
>AF016664-8|AAY44018.1| 397|Caenorhabditis elegans Hypothetical
protein D2062.12 protein.
Length = 397
Score = 30.7 bits (66), Expect = 1.3
Identities = 13/53 (24%), Positives = 27/53 (50%), Gaps = 2/53 (3%)
Frame = +1
Query: 190 LHLXHAN-IRESESTVRILADLQMNXIDKRLSWNAGEW-GCXTWLVSSERLWR 342
LH+ H + I++ + +++ +D+RL WN + G T+ + +WR
Sbjct: 62 LHVDHIHDIQDEQGVLKMALTFTFTWMDERLMWNPSNYSGIRTFSTTRHEMWR 114
>Z93396-5|CAB07714.1| 633|Caenorhabditis elegans Hypothetical
protein ZC15.7 protein.
Length = 633
Score = 29.1 bits (62), Expect = 4.1
Identities = 19/59 (32%), Positives = 31/59 (52%)
Frame = +1
Query: 97 TQHHCPIMIDSLLATYDRESPPDSKIVVNLTLHLXHANIRESESTVRILADLQMNXIDK 273
TQ++C ++ ++ T+D+ +P D KI+ L L A ES + + I A Q I K
Sbjct: 94 TQYNCKQVVKEIVQTFDKLNPEDLKILHGLIL----AKDSESVTPLHIAATKQDTKILK 148
>Z67737-4|CAA91539.2| 401|Caenorhabditis elegans Hypothetical
protein T01H10.5 protein.
Length = 401
Score = 29.1 bits (62), Expect = 4.1
Identities = 15/55 (27%), Positives = 24/55 (43%), Gaps = 1/55 (1%)
Frame = +1
Query: 184 LTLHLXHANIRESESTVRILADLQMNXIDKRLSWNAGEW-GCXTWLVSSERLWRP 345
L +L ++E V ++ +L D RLSWN + T E++W P
Sbjct: 79 LLYYLKLVEVQEPAEKVSVVLELVERWYDPRLSWNISLYSNVSTIFARQEKVWSP 133
>DQ645956-1|ABG36764.1| 624|Caenorhabditis elegans molting protein
MLT-4 protein.
Length = 624
Score = 29.1 bits (62), Expect = 4.1
Identities = 19/59 (32%), Positives = 31/59 (52%)
Frame = +1
Query: 97 TQHHCPIMIDSLLATYDRESPPDSKIVVNLTLHLXHANIRESESTVRILADLQMNXIDK 273
TQ++C ++ ++ T+D+ +P D KI+ L L A ES + + I A Q I K
Sbjct: 94 TQYNCKQVVKEIVQTFDKLNPEDLKILHGLIL----AKDSESVTPLHIAATKQDTKILK 148
>AC006618-5|ABB88234.1| 513|Caenorhabditis elegans Gaba/glycine
receptor family (seegbr) protein 2, isoform b protein.
Length = 513
Score = 28.7 bits (61), Expect = 5.4
Identities = 25/95 (26%), Positives = 40/95 (42%), Gaps = 10/95 (10%)
Frame = +1
Query: 112 PIMIDSLL----ATYDRESPP-----DSKIVVNLTLHLXH-ANIRESESTVRILADLQMN 261
PI +D+LL YD +SPP + VV L +++ ++ R ++ Q
Sbjct: 27 PIYLDNLLNAGRQVYDNQSPPVQHDKEEVTVVELAMYIEGMSSFRTQTMDFQLDVYFQQF 86
Query: 262 XIDKRLSWNAGEWGCXTWLVSSERLWRPDVVLLNA 366
D RL+ N ++W+PDV NA
Sbjct: 87 WRDPRLAHNETRRVLVKDKAVLHKMWKPDVYFANA 121
>AC006618-4|ABB88233.1| 546|Caenorhabditis elegans Gaba/glycine
receptor family (seegbr) protein 2, isoform a protein.
Length = 546
Score = 28.7 bits (61), Expect = 5.4
Identities = 25/95 (26%), Positives = 40/95 (42%), Gaps = 10/95 (10%)
Frame = +1
Query: 112 PIMIDSLL----ATYDRESPP-----DSKIVVNLTLHLXH-ANIRESESTVRILADLQMN 261
PI +D+LL YD +SPP + VV L +++ ++ R ++ Q
Sbjct: 27 PIYLDNLLNAGRQVYDNQSPPVQHDKEEVTVVELAMYIEGMSSFRTQTMDFQLDVYFQQF 86
Query: 262 XIDKRLSWNAGEWGCXTWLVSSERLWRPDVVLLNA 366
D RL+ N ++W+PDV NA
Sbjct: 87 WRDPRLAHNETRRVLVKDKAVLHKMWKPDVYFANA 121
>Z81125-6|CAI79225.1| 234|Caenorhabditis elegans Hypothetical
protein T22A3.3b protein.
Length = 234
Score = 27.9 bits (59), Expect = 9.4
Identities = 15/54 (27%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
Frame = -2
Query: 367 PRLAVPRQASTSVPRTPAKXCSPIPLRSNSVVCRSXSFEDLPVS-ARWTRTHEC 209
P++A+P + S + + + +P NS V + S +P+S W R H C
Sbjct: 116 PKVAMPSELSYANVKRSSGYVDYMPTTYNSNVTSNSSAASVPMSPGTWVRCHYC 169
>Z81125-5|CAB03381.2| 398|Caenorhabditis elegans Hypothetical
protein T22A3.3a protein.
Length = 398
Score = 27.9 bits (59), Expect = 9.4
Identities = 15/54 (27%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
Frame = -2
Query: 367 PRLAVPRQASTSVPRTPAKXCSPIPLRSNSVVCRSXSFEDLPVS-ARWTRTHEC 209
P++A+P + S + + + +P NS V + S +P+S W R H C
Sbjct: 280 PKVAMPSELSYANVKRSSGYVDYMPTTYNSNVTSNSSAASVPMSPGTWVRCHYC 333
>Z67737-2|CAA91537.3| 400|Caenorhabditis elegans Hypothetical
protein T01H10.2 protein.
Length = 400
Score = 27.9 bits (59), Expect = 9.4
Identities = 18/76 (23%), Positives = 30/76 (39%), Gaps = 1/76 (1%)
Frame = +1
Query: 142 YDRESPPDSKIVVNLTLHLXHANIRESESTVRILADLQMNXIDKRLSWNAGEW-GCXTWL 318
YD ++P + L L + E V ++ ++ D RLSWNA + T+
Sbjct: 64 YDPDAPKRYNYSIML-YSLKLVEVNEPAEKVAVVMEIMEYWYDIRLSWNASLYDDIDTFY 122
Query: 319 VSSERLWRPDVVLLNA 366
+W P + A
Sbjct: 123 TRQSNVWSPTLSAFGA 138
>Z46795-7|CAO82048.1| 2371|Caenorhabditis elegans Hypothetical protein
C52A11.4f protein.
Length = 2371
Score = 27.9 bits (59), Expect = 9.4
Identities = 18/66 (27%), Positives = 34/66 (51%), Gaps = 2/66 (3%)
Frame = -3
Query: 255 LKICQYPHGGLGLTNVSMXQMQGQVDYDFGVGGRLPI-VR-CEERVDHDGTVMLRLSHSA 82
L C+ P GGLG++ Q + V P+ +R +E ++ +G ++ ++SH A
Sbjct: 1779 LVACERPDGGLGISLAGNKDRDKQNVFVVNVRPSCPLAIRPGDELLEINGRLLNKISHVA 1838
Query: 81 ALAIAQ 64
A A+ +
Sbjct: 1839 ASAVVR 1844
>Z46795-5|CAA86789.5| 2393|Caenorhabditis elegans Hypothetical protein
C52A11.4a protein.
Length = 2393
Score = 27.9 bits (59), Expect = 9.4
Identities = 18/66 (27%), Positives = 34/66 (51%), Gaps = 2/66 (3%)
Frame = -3
Query: 255 LKICQYPHGGLGLTNVSMXQMQGQVDYDFGVGGRLPI-VR-CEERVDHDGTVMLRLSHSA 82
L C+ P GGLG++ Q + V P+ +R +E ++ +G ++ ++SH A
Sbjct: 1801 LVACERPDGGLGISLAGNKDRDKQNVFVVNVRPSCPLAIRPGDELLEINGRLLNKISHVA 1860
Query: 81 ALAIAQ 64
A A+ +
Sbjct: 1861 ASAVVR 1866
>Z46795-4|CAM82783.2| 2184|Caenorhabditis elegans Hypothetical protein
C52A11.4e protein.
Length = 2184
Score = 27.9 bits (59), Expect = 9.4
Identities = 18/66 (27%), Positives = 34/66 (51%), Gaps = 2/66 (3%)
Frame = -3
Query: 255 LKICQYPHGGLGLTNVSMXQMQGQVDYDFGVGGRLPI-VR-CEERVDHDGTVMLRLSHSA 82
L C+ P GGLG++ Q + V P+ +R +E ++ +G ++ ++SH A
Sbjct: 1592 LVACERPDGGLGISLAGNKDRDKQNVFVVNVRPSCPLAIRPGDELLEINGRLLNKISHVA 1651
Query: 81 ALAIAQ 64
A A+ +
Sbjct: 1652 ASAVVR 1657
>Z46795-3|CAM82782.2| 2491|Caenorhabditis elegans Hypothetical protein
C52A11.4d protein.
Length = 2491
Score = 27.9 bits (59), Expect = 9.4
Identities = 18/66 (27%), Positives = 34/66 (51%), Gaps = 2/66 (3%)
Frame = -3
Query: 255 LKICQYPHGGLGLTNVSMXQMQGQVDYDFGVGGRLPI-VR-CEERVDHDGTVMLRLSHSA 82
L C+ P GGLG++ Q + V P+ +R +E ++ +G ++ ++SH A
Sbjct: 1899 LVACERPDGGLGISLAGNKDRDKQNVFVVNVRPSCPLAIRPGDELLEINGRLLNKISHVA 1958
Query: 81 ALAIAQ 64
A A+ +
Sbjct: 1959 ASAVVR 1964
>Z46792-9|CAO82020.1| 2371|Caenorhabditis elegans Hypothetical protein
C52A11.4f protein.
Length = 2371
Score = 27.9 bits (59), Expect = 9.4
Identities = 18/66 (27%), Positives = 34/66 (51%), Gaps = 2/66 (3%)
Frame = -3
Query: 255 LKICQYPHGGLGLTNVSMXQMQGQVDYDFGVGGRLPI-VR-CEERVDHDGTVMLRLSHSA 82
L C+ P GGLG++ Q + V P+ +R +E ++ +G ++ ++SH A
Sbjct: 1779 LVACERPDGGLGISLAGNKDRDKQNVFVVNVRPSCPLAIRPGDELLEINGRLLNKISHVA 1838
Query: 81 ALAIAQ 64
A A+ +
Sbjct: 1839 ASAVVR 1844
>Z46792-7|CAA86769.5| 2393|Caenorhabditis elegans Hypothetical protein
C52A11.4a protein.
Length = 2393
Score = 27.9 bits (59), Expect = 9.4
Identities = 18/66 (27%), Positives = 34/66 (51%), Gaps = 2/66 (3%)
Frame = -3
Query: 255 LKICQYPHGGLGLTNVSMXQMQGQVDYDFGVGGRLPI-VR-CEERVDHDGTVMLRLSHSA 82
L C+ P GGLG++ Q + V P+ +R +E ++ +G ++ ++SH A
Sbjct: 1801 LVACERPDGGLGISLAGNKDRDKQNVFVVNVRPSCPLAIRPGDELLEINGRLLNKISHVA 1860
Query: 81 ALAIAQ 64
A A+ +
Sbjct: 1861 ASAVVR 1866
>Z46792-6|CAM82812.2| 2184|Caenorhabditis elegans Hypothetical protein
C52A11.4e protein.
Length = 2184
Score = 27.9 bits (59), Expect = 9.4
Identities = 18/66 (27%), Positives = 34/66 (51%), Gaps = 2/66 (3%)
Frame = -3
Query: 255 LKICQYPHGGLGLTNVSMXQMQGQVDYDFGVGGRLPI-VR-CEERVDHDGTVMLRLSHSA 82
L C+ P GGLG++ Q + V P+ +R +E ++ +G ++ ++SH A
Sbjct: 1592 LVACERPDGGLGISLAGNKDRDKQNVFVVNVRPSCPLAIRPGDELLEINGRLLNKISHVA 1651
Query: 81 ALAIAQ 64
A A+ +
Sbjct: 1652 ASAVVR 1657
>Z46792-5|CAM82811.2| 2491|Caenorhabditis elegans Hypothetical protein
C52A11.4d protein.
Length = 2491
Score = 27.9 bits (59), Expect = 9.4
Identities = 18/66 (27%), Positives = 34/66 (51%), Gaps = 2/66 (3%)
Frame = -3
Query: 255 LKICQYPHGGLGLTNVSMXQMQGQVDYDFGVGGRLPI-VR-CEERVDHDGTVMLRLSHSA 82
L C+ P GGLG++ Q + V P+ +R +E ++ +G ++ ++SH A
Sbjct: 1899 LVACERPDGGLGISLAGNKDRDKQNVFVVNVRPSCPLAIRPGDELLEINGRLLNKISHVA 1958
Query: 81 ALAIAQ 64
A A+ +
Sbjct: 1959 ASAVVR 1964
>Z46792-2|CAL44970.3| 2202|Caenorhabditis elegans Hypothetical protein
C52A11.4c protein.
Length = 2202
Score = 27.9 bits (59), Expect = 9.4
Identities = 18/66 (27%), Positives = 34/66 (51%), Gaps = 2/66 (3%)
Frame = -3
Query: 255 LKICQYPHGGLGLTNVSMXQMQGQVDYDFGVGGRLPI-VR-CEERVDHDGTVMLRLSHSA 82
L C+ P GGLG++ Q + V P+ +R +E ++ +G ++ ++SH A
Sbjct: 1610 LVACERPDGGLGISLAGNKDRDKQNVFVVNVRPSCPLAIRPGDELLEINGRLLNKISHVA 1669
Query: 81 ALAIAQ 64
A A+ +
Sbjct: 1670 ASAVVR 1675
>DQ823041-1|ABH03415.1| 2166|Caenorhabditis elegans MPZ-1 protein.
Length = 2166
Score = 27.9 bits (59), Expect = 9.4
Identities = 18/66 (27%), Positives = 34/66 (51%), Gaps = 2/66 (3%)
Frame = -3
Query: 255 LKICQYPHGGLGLTNVSMXQMQGQVDYDFGVGGRLPI-VR-CEERVDHDGTVMLRLSHSA 82
L C+ P GGLG++ Q + V P+ +R +E ++ +G ++ ++SH A
Sbjct: 1570 LVACERPDGGLGISLAGNKDRDKQNVFVVNVRPSCPLAIRPGDELLEINGRLLNKISHVA 1629
Query: 81 ALAIAQ 64
A A+ +
Sbjct: 1630 ASAVVR 1635
>AF408760-1|AAO27839.1| 318|Caenorhabditis elegans unknown protein
protein.
Length = 318
Score = 27.9 bits (59), Expect = 9.4
Identities = 15/54 (27%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
Frame = -2
Query: 367 PRLAVPRQASTSVPRTPAKXCSPIPLRSNSVVCRSXSFEDLPVS-ARWTRTHEC 209
P++A+P + S + + + +P NS V + S +P+S W R H C
Sbjct: 200 PKVAMPSELSYANVKRSSGYVDYMPTTYNSNVTSNSSAASVPMSPGTWVRCHYC 253
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,532,449
Number of Sequences: 27780
Number of extensions: 312966
Number of successful extensions: 893
Number of sequences better than 10.0: 78
Number of HSP's better than 10.0 without gapping: 825
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 879
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2061488408
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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