Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP03_FL5_F07
(830 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic ac... 47 2e-07
AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic ac... 44 2e-06
DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholi... 43 3e-06
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 42 5e-06
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 42 5e-06
DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 42 7e-06
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 42 9e-06
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 40 2e-05
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 40 4e-05
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 40 4e-05
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 40 4e-05
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 40 4e-05
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 40 4e-05
DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholi... 38 9e-05
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 38 1e-04
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 38 2e-04
AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic ac... 38 2e-04
DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 37 3e-04
DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channe... 31 0.013
DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated... 22 6.0
>AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha-3 protein.
Length = 537
Score = 46.8 bits (106), Expect = 2e-07
Identities = 40/137 (29%), Positives = 61/137 (44%), Gaps = 13/137 (9%)
Frame = +1
Query: 61 HLCYS*CG-RMRKTQHHCPIMIDSLLATYDRESPPDSKIVVNLTLHLX-------HANIR 216
H+ YS G ++ + + D LL+ Y+R P LT+ L N++
Sbjct: 17 HIIYSVAGLKIFEANPDTKRLYDDLLSNYNRLIRPVMNNTETLTVQLGLKLSQLIEMNLK 76
Query: 217 ESESTVRILADLQMNXIDKRLSWNAGEWGCXTWL-VSSERLWRPDVVLLNAAATTAGDYA 393
T + + + N D +L WN E+G L V SE +W PD+VL N A G+Y
Sbjct: 77 NQVMTTNVWVEQRWN--DYKLKWNPEEYGGVEMLYVPSENIWLPDIVLYNNA---DGNYE 131
Query: 394 L----RARVSNNGSVSW 432
+ +A + G VSW
Sbjct: 132 VTLMTKATLKYTGDVSW 148
>AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic
acetylcholine receptorApisa2 subunit protein.
Length = 541
Score = 43.6 bits (98), Expect = 2e-06
Identities = 36/114 (31%), Positives = 53/114 (46%), Gaps = 9/114 (7%)
Frame = +1
Query: 118 MIDSLLATYDRESPPDSK----IVVNLTLHLXHA---NIRESESTVRILADLQMNXIDKR 276
+ D LL+ Y+R P S +VV L L L N+++ T + L+ D +
Sbjct: 24 LYDDLLSNYNRLIRPVSNNNDTVVVKLGLRLSQLIDLNLKDQILTTNVW--LEHEWQDHK 81
Query: 277 LSWNAGEWGCXTWL-VSSERLWRPDVVLLNAAATTAGDYAL-RARVSNNGSVSW 432
W+ E+G T L V SE +W PD+VL N A G + +A + G V W
Sbjct: 82 FQWDPAEYGGVTELYVPSEHIWLPDIVLYNNADGEYGVTTMTKAILHYTGKVLW 135
>DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholine
receptor alpha1subunit protein.
Length = 601
Score = 43.2 bits (97), Expect = 3e-06
Identities = 34/117 (29%), Positives = 55/117 (47%), Gaps = 12/117 (10%)
Frame = +1
Query: 118 MIDSLLATYDRESPP----DSKIVVNLTLHLXH---ANIRESESTVRILADLQMNXIDKR 276
+ D LL+ Y+R P ++ V + L L N++ T + + + N D +
Sbjct: 24 LYDDLLSNYNRLIRPVGNNSDRLTVKMGLRLSQLIDVNLKNQIMTTNVWVEQEWN--DYK 81
Query: 277 LSWNAGEWG-CXTWLVSSERLWRPDVVLLNAAATTAGDYAL----RARVSNNGSVSW 432
L WN ++G T V SE +W PD+VL N A G+Y + +A + + G V W
Sbjct: 82 LKWNPDDYGGVDTLHVPSEHIWLPDIVLYNNA---DGNYEVTIMTKAILHHTGKVVW 135
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 42.3 bits (95), Expect = 5e-06
Identities = 35/134 (26%), Positives = 62/134 (46%), Gaps = 8/134 (5%)
Frame = +1
Query: 46 YLLSPHLCY-S*CGRMRKTQHHCPIMIDSLLATYDRESPP----DSKIVVNLTLHLXHA- 207
Y ++ Y S CGR K +++ LL++Y+ P + V + L
Sbjct: 39 YFHHTYIIYESLCGRHEKR------LLNELLSSYNTLERPVANESEPLEVKFGITLQQII 92
Query: 208 NIRESESTVRILADLQMNXIDKRLSWNAGEWGCXTWL-VSSERLWRPDVVLLNAA-ATTA 381
++ E + A L++ +D L WN E+G L ++ +LW+PD+++ N+A
Sbjct: 93 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 152
Query: 382 GDYALRARVSNNGS 423
G Y V++NGS
Sbjct: 153 GTYQTNVVVTHNGS 166
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 42.3 bits (95), Expect = 5e-06
Identities = 35/134 (26%), Positives = 62/134 (46%), Gaps = 8/134 (5%)
Frame = +1
Query: 46 YLLSPHLCY-S*CGRMRKTQHHCPIMIDSLLATYDRESPP----DSKIVVNLTLHLXHA- 207
Y ++ Y S CGR K +++ LL++Y+ P + V + L
Sbjct: 39 YFHHTYIIYESLCGRHEKR------LLNELLSSYNTLERPVANESEPLEVKFGITLQQII 92
Query: 208 NIRESESTVRILADLQMNXIDKRLSWNAGEWGCXTWL-VSSERLWRPDVVLLNAA-ATTA 381
++ E + A L++ +D L WN E+G L ++ +LW+PD+++ N+A
Sbjct: 93 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 152
Query: 382 GDYALRARVSNNGS 423
G Y V++NGS
Sbjct: 153 GTYQTNVVVTHNGS 166
>DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine
receptor alpha3subunit protein.
Length = 566
Score = 41.9 bits (94), Expect = 7e-06
Identities = 31/114 (27%), Positives = 52/114 (45%), Gaps = 9/114 (7%)
Frame = +1
Query: 118 MIDSLLATYDRESPPDSKIVVNLTL-------HLXHANIRESESTVRILADLQMNXIDKR 276
+ D LL+ Y++ P + LT+ L N++ T + ++ + D +
Sbjct: 28 LYDDLLSNYNKLVRPVVNVTDALTVKIKLKLSQLIDVNLKNQIMTTNLW--VEQSWYDYK 85
Query: 277 LSWNAGEWGCXTWL-VSSERLWRPDVVLL-NAAATTAGDYALRARVSNNGSVSW 432
L W+ E+G L V S+ +WRPD+VL NA A +A ++ G V W
Sbjct: 86 LKWDPKEYGGVEMLHVPSDHIWRPDIVLYNNADGNFEVTLATKATLNYTGRVEW 139
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 41.5 bits (93), Expect = 9e-06
Identities = 22/74 (29%), Positives = 39/74 (52%), Gaps = 2/74 (2%)
Frame = +1
Query: 208 NIRESESTVRILADLQMNXIDKRLSWNAGEWGCXTWL-VSSERLWRPDVVLLNAA-ATTA 381
++ E + A L++ +D L WN E+G L ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 382 GDYALRARVSNNGS 423
G Y V++NGS
Sbjct: 85 GTYQTSVVVTHNGS 98
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 40.3 bits (90), Expect = 2e-05
Identities = 26/91 (28%), Positives = 43/91 (47%), Gaps = 3/91 (3%)
Frame = +1
Query: 169 KIVVNLTL-HLXHANIRESESTVRILADLQMNXIDKRLSWNAGEWGCXTWL-VSSERLWR 342
++ + L L L N++ T + ++ + D +L W E+G L V S+ +WR
Sbjct: 55 RVCIKLKLSQLIDVNLKNQIMTTNLW--VEQSWYDYKLRWEPKEYGGVKMLHVPSDHIWR 112
Query: 343 PDVVLL-NAAATTAGDYALRARVSNNGSVSW 432
PD+VL NA A +A + + G V W
Sbjct: 113 PDIVLYNNADGNFEVTLATKATIYHQGLVEW 143
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 39.5 bits (88), Expect = 4e-05
Identities = 21/74 (28%), Positives = 39/74 (52%), Gaps = 2/74 (2%)
Frame = +1
Query: 208 NIRESESTVRILADLQMNXIDKRLSWNAGEWGCXTWL-VSSERLWRPDVVLLNAA-ATTA 381
++ E + A L++ +D L WN E+G L ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 382 GDYALRARVSNNGS 423
G Y V+++GS
Sbjct: 85 GTYQTSVVVTHDGS 98
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 39.5 bits (88), Expect = 4e-05
Identities = 21/74 (28%), Positives = 39/74 (52%), Gaps = 2/74 (2%)
Frame = +1
Query: 208 NIRESESTVRILADLQMNXIDKRLSWNAGEWGCXTWL-VSSERLWRPDVVLLNAA-ATTA 381
++ E + A L++ +D L WN E+G L ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 382 GDYALRARVSNNGS 423
G Y V+++GS
Sbjct: 85 GTYQTSVVVTHDGS 98
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 39.5 bits (88), Expect = 4e-05
Identities = 21/74 (28%), Positives = 39/74 (52%), Gaps = 2/74 (2%)
Frame = +1
Query: 208 NIRESESTVRILADLQMNXIDKRLSWNAGEWGCXTWL-VSSERLWRPDVVLLNAA-ATTA 381
++ E + A L++ +D L WN E+G L ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 382 GDYALRARVSNNGS 423
G Y V+++GS
Sbjct: 85 GTYQTSVVVTHDGS 98
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 39.5 bits (88), Expect = 4e-05
Identities = 21/74 (28%), Positives = 39/74 (52%), Gaps = 2/74 (2%)
Frame = +1
Query: 208 NIRESESTVRILADLQMNXIDKRLSWNAGEWGCXTWL-VSSERLWRPDVVLLNAA-ATTA 381
++ E + A L++ +D L WN E+G L ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 382 GDYALRARVSNNGS 423
G Y V+++GS
Sbjct: 85 GTYQTSVVVTHDGS 98
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 39.5 bits (88), Expect = 4e-05
Identities = 21/74 (28%), Positives = 39/74 (52%), Gaps = 2/74 (2%)
Frame = +1
Query: 208 NIRESESTVRILADLQMNXIDKRLSWNAGEWGCXTWL-VSSERLWRPDVVLLNAA-ATTA 381
++ E + A L++ +D L WN E+G L ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 382 GDYALRARVSNNGS 423
G Y V+++GS
Sbjct: 85 GTYQTSVVVTHDGS 98
>DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholine
receptor beta2subunit protein.
Length = 427
Score = 38.3 bits (85), Expect = 9e-05
Identities = 22/79 (27%), Positives = 37/79 (46%), Gaps = 3/79 (3%)
Frame = +1
Query: 130 LLATYDRESPPDSKIV--VNLTLHLXHANIRESESTVRILADLQMNXIDKRLSWNAGEWG 303
L YDR+ P+ K ++ L + H N+ E TV L++ L+W + E+
Sbjct: 44 LFCDYDRDIIPEQKNATKIDFGLSIQHYNVDEYSHTVDFHVMLKLMWEQSHLTWKSSEFD 103
Query: 304 CXTWL-VSSERLWRPDVVL 357
+ V S +W PD+V+
Sbjct: 104 SINSIRVKSYEIWVPDIVM 122
Score = 21.8 bits (44), Expect = 8.0
Identities = 6/11 (54%), Positives = 7/11 (63%)
Frame = +2
Query: 482 WPNDMXTCTFH 514
WP D+ CT H
Sbjct: 166 WPYDILNCTIH 176
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 37.9 bits (84), Expect = 1e-04
Identities = 20/60 (33%), Positives = 31/60 (51%), Gaps = 2/60 (3%)
Frame = +1
Query: 250 LQMNXIDKRLSWNAGEWGCXTWL-VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGS 423
L++ D + WN ++G L + RLW+PDV++ N+A G Y V NNG+
Sbjct: 76 LKLEWNDVNMRWNVSDYGGVRDLRIPPHRLWKPDVLMYNSADEGFDGTYPTNVVVKNNGT 135
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 37.5 bits (83), Expect = 2e-04
Identities = 28/94 (29%), Positives = 46/94 (48%), Gaps = 6/94 (6%)
Frame = +1
Query: 169 KIVVNLTL-HLXHANIRESESTVRILADLQMNXIDKRLSWNAGEWGCXTWL-VSSERLWR 342
++ + L L L N++ T + ++ + D +L W E+G L V S+ +WR
Sbjct: 55 RVCIKLKLSQLIDVNLKNQIMTTNLW--VEQSWYDYKLRWEPKEYGGVKMLHVPSDHIWR 112
Query: 343 PDVVLLNAAATTAGDYAL----RARVSNNGSVSW 432
PD+VL N A G+Y + +A V +G V W
Sbjct: 113 PDIVLYNNA---DGNYEVTLMTKATVYYSGLVVW 143
>AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic
acetylcholine Apisa7-2 subunit protein.
Length = 461
Score = 37.5 bits (83), Expect = 2e-04
Identities = 21/58 (36%), Positives = 26/58 (44%), Gaps = 3/58 (5%)
Frame = +1
Query: 268 DKRLSWNAGEW-GCXTWLVSSERLWRPDVVLLNAAATTAGDYALRAR--VSNNGSVSW 432
D L WNA E+ G V R+WRPD +L N A + VS+ G V W
Sbjct: 64 DHHLKWNASEFAGIRVIRVPYNRVWRPDTILYNNADPQYSSAVINTNVIVSHTGEVVW 121
>DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine
receptor beta1subunit protein.
Length = 520
Score = 36.7 bits (81), Expect = 3e-04
Identities = 26/94 (27%), Positives = 45/94 (47%), Gaps = 6/94 (6%)
Frame = +1
Query: 169 KIVVNLTLHLXHA-NIRESESTVRILADLQMNXIDKRLSWNAGEWGCXTWL-VSSERLWR 342
K+ VN L N+ E ++ L+ D +L W+ ++G L + +++W+
Sbjct: 51 KVHVNFGLAFVQLINVNEKNQIMKSNVWLRFIWTDYQLQWDEADYGGIGVLRLPPDKVWK 110
Query: 343 PDVVLLNAAATTAGDYALRAR----VSNNGSVSW 432
PD+VL N A G+Y +R + + NG V W
Sbjct: 111 PDIVLFNNA---DGNYEVRYKSNVLIYPNGDVLW 141
>DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channel
protein.
Length = 463
Score = 31.1 bits (67), Expect = 0.013
Identities = 20/87 (22%), Positives = 40/87 (45%), Gaps = 5/87 (5%)
Frame = +1
Query: 118 MIDSLLATYDRESPPD-----SKIVVNLTLHLXHANIRESESTVRILADLQMNXIDKRLS 282
++D+LL YD PD + + V++ + I E + T + + + +D+RL+
Sbjct: 9 LLDNLLRGYDNSVRPDFGGPPATVEVDIMVRSM-GPISEVDMTYSMDCYFRQSWVDRRLA 67
Query: 283 WNAGEWGCXTWLVSSERLWRPDVVLLN 363
+ G+ + R+W+PD N
Sbjct: 68 FQGGKETLALSISMLARIWKPDTYFYN 94
>DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 510
Score = 22.2 bits (45), Expect = 6.0
Identities = 7/12 (58%), Positives = 8/12 (66%)
Frame = +1
Query: 328 ERLWRPDVVLLN 363
ER+WRPD N
Sbjct: 115 ERIWRPDTYFYN 126
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 190,765
Number of Sequences: 438
Number of extensions: 4036
Number of successful extensions: 44
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 35
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 36
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 26581563
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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