Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP03_FL5_F06
(905 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY523978-1|AAS16936.1| 644|Homo sapiens truncated RMO1c splice ... 46 2e-04
AY523977-1|AAS16935.1| 649|Homo sapiens RMO1 protein. 46 2e-04
AY494951-1|AAS82582.1| 1250|Homo sapiens lamellipodin protein. 46 2e-04
AJ584699-1|CAE48361.1| 1250|Homo sapiens RAPH1 protein protein. 46 2e-04
AC018891-2|AAY14676.1| 649|Homo sapiens unknown protein. 46 2e-04
AB053311-1|BAB69020.1| 649|Homo sapiens ALS2CR9 protein. 46 2e-04
AB051468-1|BAB21772.1| 1236|Homo sapiens KIAA1681 protein protein. 46 2e-04
AK096270-1|BAC04744.1| 136|Homo sapiens protein ( Homo sapiens ... 44 8e-04
>AY523978-1|AAS16936.1| 644|Homo sapiens truncated RMO1c splice
variant protein.
Length = 644
Score = 46.0 bits (104), Expect = 2e-04
Identities = 39/131 (29%), Positives = 62/131 (47%), Gaps = 8/131 (6%)
Frame = +1
Query: 280 DPEALLNEWLGELTVLTAGLNSTGDGSLALR-PLEIVAPRID-TYRFSMANLEET----Q 441
D + + WLGEL LT L+S R PL + +YRFS+ NL E +
Sbjct: 23 DLDKMFGAWLGELDKLTQSLDSDKPMEPVKRSPLRQETNMANFSYRFSIYNLNEALNQGE 82
Query: 442 DADLDAILGELCALDSEYDEELSRVSSGFASGSKDRVPRT--TEPCTVRQEKDNSDAASG 615
DLDA++ +LC++ ++ELS + SG SK ++ T T+ V + G
Sbjct: 83 TVDLDALMADLCSI----EQELSSIGSG---NSKRQITETKATQKLPVSRHTLKHGTLKG 135
Query: 616 ITRTESRTMTP 648
++ + +R P
Sbjct: 136 LSSSSNRIAKP 146
>AY523977-1|AAS16935.1| 649|Homo sapiens RMO1 protein.
Length = 649
Score = 46.0 bits (104), Expect = 2e-04
Identities = 39/131 (29%), Positives = 62/131 (47%), Gaps = 8/131 (6%)
Frame = +1
Query: 280 DPEALLNEWLGELTVLTAGLNSTGDGSLALR-PLEIVAPRID-TYRFSMANLEET----Q 441
D + + WLGEL LT L+S R PL + +YRFS+ NL E +
Sbjct: 23 DLDKMFGAWLGELDKLTQSLDSDKPMEPVKRSPLRQETNMANFSYRFSIYNLNEALNQGE 82
Query: 442 DADLDAILGELCALDSEYDEELSRVSSGFASGSKDRVPRT--TEPCTVRQEKDNSDAASG 615
DLDA++ +LC++ ++ELS + SG SK ++ T T+ V + G
Sbjct: 83 TVDLDALMADLCSI----EQELSSIGSG---NSKRQITETKATQKLPVSRHTLKHGTLKG 135
Query: 616 ITRTESRTMTP 648
++ + +R P
Sbjct: 136 LSSSSNRIAKP 146
>AY494951-1|AAS82582.1| 1250|Homo sapiens lamellipodin protein.
Length = 1250
Score = 46.0 bits (104), Expect = 2e-04
Identities = 39/131 (29%), Positives = 62/131 (47%), Gaps = 8/131 (6%)
Frame = +1
Query: 280 DPEALLNEWLGELTVLTAGLNSTGDGSLALR-PLEIVAPRID-TYRFSMANLEET----Q 441
D + + WLGEL LT L+S R PL + +YRFS+ NL E +
Sbjct: 23 DLDKMFGAWLGELDKLTQSLDSDKPMEPVKRSPLRQETNMANFSYRFSIYNLNEALNQGE 82
Query: 442 DADLDAILGELCALDSEYDEELSRVSSGFASGSKDRVPRT--TEPCTVRQEKDNSDAASG 615
DLDA++ +LC++ ++ELS + SG SK ++ T T+ V + G
Sbjct: 83 TVDLDALMADLCSI----EQELSSIGSG---NSKRQITETKATQKLPVSRHTLKHGTLKG 135
Query: 616 ITRTESRTMTP 648
++ + +R P
Sbjct: 136 LSSSSNRIAKP 146
>AJ584699-1|CAE48361.1| 1250|Homo sapiens RAPH1 protein protein.
Length = 1250
Score = 46.0 bits (104), Expect = 2e-04
Identities = 39/131 (29%), Positives = 62/131 (47%), Gaps = 8/131 (6%)
Frame = +1
Query: 280 DPEALLNEWLGELTVLTAGLNSTGDGSLALR-PLEIVAPRID-TYRFSMANLEET----Q 441
D + + WLGEL LT L+S R PL + +YRFS+ NL E +
Sbjct: 23 DLDKMFGAWLGELDKLTQSLDSDKPMEPVKRSPLRQETNMANFSYRFSIYNLNEALNQGE 82
Query: 442 DADLDAILGELCALDSEYDEELSRVSSGFASGSKDRVPRT--TEPCTVRQEKDNSDAASG 615
DLDA++ +LC++ ++ELS + SG SK ++ T T+ V + G
Sbjct: 83 TVDLDALMADLCSI----EQELSSIGSG---NSKRQITETKATQKLPVSRHTLKHGTLKG 135
Query: 616 ITRTESRTMTP 648
++ + +R P
Sbjct: 136 LSSSSNRIAKP 146
>AC018891-2|AAY14676.1| 649|Homo sapiens unknown protein.
Length = 649
Score = 46.0 bits (104), Expect = 2e-04
Identities = 39/131 (29%), Positives = 62/131 (47%), Gaps = 8/131 (6%)
Frame = +1
Query: 280 DPEALLNEWLGELTVLTAGLNSTGDGSLALR-PLEIVAPRID-TYRFSMANLEET----Q 441
D + + WLGEL LT L+S R PL + +YRFS+ NL E +
Sbjct: 23 DLDKMFGAWLGELDKLTQSLDSDKPMEPVKRSPLRQETNMANFSYRFSIYNLNEALNQGE 82
Query: 442 DADLDAILGELCALDSEYDEELSRVSSGFASGSKDRVPRT--TEPCTVRQEKDNSDAASG 615
DLDA++ +LC++ ++ELS + SG SK ++ T T+ V + G
Sbjct: 83 TVDLDALMADLCSI----EQELSSIGSG---NSKRQITETKATQKLPVSRHTLKHGTLKG 135
Query: 616 ITRTESRTMTP 648
++ + +R P
Sbjct: 136 LSSSSNRIAKP 146
>AB053311-1|BAB69020.1| 649|Homo sapiens ALS2CR9 protein.
Length = 649
Score = 46.0 bits (104), Expect = 2e-04
Identities = 39/131 (29%), Positives = 62/131 (47%), Gaps = 8/131 (6%)
Frame = +1
Query: 280 DPEALLNEWLGELTVLTAGLNSTGDGSLALR-PLEIVAPRID-TYRFSMANLEET----Q 441
D + + WLGEL LT L+S R PL + +YRFS+ NL E +
Sbjct: 23 DLDKMFGAWLGELDKLTQSLDSDKPMEPVKRSPLRQETNMANFSYRFSIYNLNEALNQGE 82
Query: 442 DADLDAILGELCALDSEYDEELSRVSSGFASGSKDRVPRT--TEPCTVRQEKDNSDAASG 615
DLDA++ +LC++ ++ELS + SG SK ++ T T+ V + G
Sbjct: 83 TVDLDALMADLCSI----EQELSSIGSG---NSKRQITETKATQKLPVSRHTLKHGTLKG 135
Query: 616 ITRTESRTMTP 648
++ + +R P
Sbjct: 136 LSSSSNRIAKP 146
>AB051468-1|BAB21772.1| 1236|Homo sapiens KIAA1681 protein protein.
Length = 1236
Score = 46.0 bits (104), Expect = 2e-04
Identities = 39/131 (29%), Positives = 62/131 (47%), Gaps = 8/131 (6%)
Frame = +1
Query: 280 DPEALLNEWLGELTVLTAGLNSTGDGSLALR-PLEIVAPRID-TYRFSMANLEET----Q 441
D + + WLGEL LT L+S R PL + +YRFS+ NL E +
Sbjct: 9 DLDKMFGAWLGELDKLTQSLDSDKPMEPVKRSPLRQETNMANFSYRFSIYNLNEALNQGE 68
Query: 442 DADLDAILGELCALDSEYDEELSRVSSGFASGSKDRVPRT--TEPCTVRQEKDNSDAASG 615
DLDA++ +LC++ ++ELS + SG SK ++ T T+ V + G
Sbjct: 69 TVDLDALMADLCSI----EQELSSIGSG---NSKRQITETKATQKLPVSRHTLKHGTLKG 121
Query: 616 ITRTESRTMTP 648
++ + +R P
Sbjct: 122 LSSSSNRIAKP 132
>AK096270-1|BAC04744.1| 136|Homo sapiens protein ( Homo sapiens
cDNA FLJ38951 fis, clone NT2NE2018739. ).
Length = 136
Score = 44.0 bits (99), Expect = 8e-04
Identities = 37/113 (32%), Positives = 54/113 (47%), Gaps = 6/113 (5%)
Frame = +1
Query: 280 DPEALLNEWLGELTVLTAGLNSTGDGSLALR-PLEIVAPRID-TYRFSMANLEET----Q 441
D + + WLGEL LT L+S R PL + +YRFS+ NL E +
Sbjct: 23 DLDKMFGAWLGELDKLTQSLDSDKPMEPVKRSPLRQETNMANFSYRFSIYNLNEALNQGE 82
Query: 442 DADLDAILGELCALDSEYDEELSRVSSGFASGSKDRVPRTTEPCTVRQEKDNS 600
DLDA++ +LC++ ++ELS + SG SK ++ T R D S
Sbjct: 83 TVDLDALMADLCSI----EQELSSIGSG---NSKRQITETKATGATRTLADCS 128
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 108,813,143
Number of Sequences: 237096
Number of extensions: 2208065
Number of successful extensions: 6635
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 6167
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6617
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11714809042
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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