Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP03_FL5_F06
(905 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L10986-1|AAR25648.1| 779|Caenorhabditis elegans Abnormal cell m... 40 0.003
L10986-2|AAK84523.2| 667|Caenorhabditis elegans Abnormal cell m... 39 0.004
Z74033-2|CAA98476.2| 419|Caenorhabditis elegans Hypothetical pr... 31 1.1
Z74033-1|CAA98475.2| 460|Caenorhabditis elegans Hypothetical pr... 31 1.1
Z48716-1|CAA88601.1| 482|Caenorhabditis elegans Hypothetical pr... 31 1.5
AC024835-3|AAK68538.2| 405|Caenorhabditis elegans Hypothetical ... 31 1.5
AF039049-11|AAB94246.1| 499|Caenorhabditis elegans Cytochrome p... 30 2.0
Z82093-9|CAD27620.1| 2920|Caenorhabditis elegans Hypothetical pr... 29 3.5
Z82064-3|CAD27611.1| 2920|Caenorhabditis elegans Hypothetical pr... 29 3.5
AL032638-2|CAD27619.1| 2920|Caenorhabditis elegans Hypothetical ... 29 3.5
AJ307058-1|CAC38842.1| 2920|Caenorhabditis elegans HMR-1B protei... 29 3.5
AF039049-12|AAB94245.1| 499|Caenorhabditis elegans Cytochrome p... 29 3.5
AF125442-12|AAD12797.1| 260|Caenorhabditis elegans Hypothetical... 28 8.0
>L10986-1|AAR25648.1| 779|Caenorhabditis elegans Abnormal cell
migration protein10, isoform c protein.
Length = 779
Score = 39.5 bits (88), Expect = 0.003
Identities = 32/108 (29%), Positives = 49/108 (45%), Gaps = 6/108 (5%)
Frame = +1
Query: 247 VEEVGAGSTADDPEALLNEWLGELTVLTAGLNSTGDGSLALRPLEIVAPRIDTYRFSMAN 426
+ E + DP + +T+ T + RP P IDT R+SM N
Sbjct: 88 IAETADDEESKDPVEKTENFEPSVTMDTYDFPDPYPVQIRARPQVPPKPPIDTVRYSMNN 147
Query: 427 LEETQDADLDAILGELCALDSEY------DEELSRVSSGFASGSKDRV 552
++E+ D LD +L EL AL+++ D+ L VS AS S++ V
Sbjct: 148 IKESADWQLDELLEELEALETQLNSSNGGDQLLLGVSGIPASSSRENV 195
>L10986-2|AAK84523.2| 667|Caenorhabditis elegans Abnormal cell
migration protein10, isoform a protein.
Length = 667
Score = 39.1 bits (87), Expect = 0.004
Identities = 27/67 (40%), Positives = 38/67 (56%), Gaps = 6/67 (8%)
Frame = +1
Query: 370 RPLEIVAPRIDTYRFSMANLEETQDADLDAILGELCALDSEY------DEELSRVSSGFA 531
RP P IDT R+SM N++E+ D LD +L EL AL+++ D+ L VS A
Sbjct: 17 RPQVPPKPPIDTVRYSMNNIKESADWQLDELLEELEALETQLNSSNGGDQLLLGVSGIPA 76
Query: 532 SGSKDRV 552
S S++ V
Sbjct: 77 SSSRENV 83
>Z74033-2|CAA98476.2| 419|Caenorhabditis elegans Hypothetical
protein F38B7.1b protein.
Length = 419
Score = 31.1 bits (67), Expect = 1.1
Identities = 18/63 (28%), Positives = 26/63 (41%)
Frame = +1
Query: 388 APRIDTYRFSMANLEETQDADLDAILGELCALDSEYDEELSRVSSGFASGSKDRVPRTTE 567
APR+ T RF + D+ +L ++C + E + LS SGF T
Sbjct: 339 APRVPTSRFLSYDQSNLNDSQFSNLLNDICQWNIE--DSLSTPFSGFLPSKWSTTTEETS 396
Query: 568 PCT 576
P T
Sbjct: 397 PAT 399
>Z74033-1|CAA98475.2| 460|Caenorhabditis elegans Hypothetical
protein F38B7.1a protein.
Length = 460
Score = 31.1 bits (67), Expect = 1.1
Identities = 18/63 (28%), Positives = 26/63 (41%)
Frame = +1
Query: 388 APRIDTYRFSMANLEETQDADLDAILGELCALDSEYDEELSRVSSGFASGSKDRVPRTTE 567
APR+ T RF + D+ +L ++C + E + LS SGF T
Sbjct: 380 APRVPTSRFLSYDQSNLNDSQFSNLLNDICQWNIE--DSLSTPFSGFLPSKWSTTTEETS 437
Query: 568 PCT 576
P T
Sbjct: 438 PAT 440
>Z48716-1|CAA88601.1| 482|Caenorhabditis elegans Hypothetical
protein F59B10.2 protein.
Length = 482
Score = 30.7 bits (66), Expect = 1.5
Identities = 24/91 (26%), Positives = 38/91 (41%), Gaps = 3/91 (3%)
Frame = -1
Query: 530 AKPDDTLDNXXXXXXXXXXXSPRMASRSASCVSSRFAIENR*VS---MRGATISRGLRAN 360
AKPDD N P+++SRS++ S NR + + I++
Sbjct: 306 AKPDDIRQNKKPEPIPYEDFIPKLSSRSSNSEKSTVRETNRTLEESLKKTLKINKSSEKM 365
Query: 359 EPSPVELRPAVRTVSSPSHSFRRASGSSAVE 267
E ++R A R+ SS S + R A +E
Sbjct: 366 EKPRKDIRRAPRSSSSSSSTLRDAEREQDIE 396
>AC024835-3|AAK68538.2| 405|Caenorhabditis elegans Hypothetical
protein Y57E12B.4 protein.
Length = 405
Score = 30.7 bits (66), Expect = 1.5
Identities = 19/53 (35%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
Frame = -1
Query: 353 SPVELRPAVRTVSSPSHSFRRASGSSAVEP-APTSSTNAIKTMMFSRSHTKDT 198
SP E+ VSS S F + SS EP AP+ ST +I + +H + T
Sbjct: 160 SPAEIDTTTPQVSS-SEPFTTSENSSTAEPFAPSDSTTSINETQTTSTHAETT 211
>AF039049-11|AAB94246.1| 499|Caenorhabditis elegans Cytochrome p450
family protein 35B2 protein.
Length = 499
Score = 30.3 bits (65), Expect = 2.0
Identities = 19/62 (30%), Positives = 27/62 (43%)
Frame = -3
Query: 309 KPLVQKSFGIVSGGARTDFLYQRHQNNDVFALSH*RYNSRSMPSKKRLAHFFGMSTNKRN 130
+P K + I SG T L H NND+F + Y R + + K L KR+
Sbjct: 384 EPTNVKGYEIDSGTVMTAQLGALHVNNDIFKNADKFYPERFIENGKLLNQVIPFGIGKRS 443
Query: 129 CL 124
C+
Sbjct: 444 CV 445
>Z82093-9|CAD27620.1| 2920|Caenorhabditis elegans Hypothetical protein
W02B9.1b protein.
Length = 2920
Score = 29.5 bits (63), Expect = 3.5
Identities = 18/73 (24%), Positives = 36/73 (49%)
Frame = +1
Query: 340 NSTGDGSLALRPLEIVAPRIDTYRFSMANLEETQDADLDAILGELCALDSEYDEELSRVS 519
N+T + + + + AP+ + +++ +EE D D+ +L + A D++ DE+ SR+
Sbjct: 1417 NATTNVYIHIEDVNDNAPQFEQQKYATTVIEE--DVDIPKVLFNVHATDADQDEKSSRIV 1474
Query: 520 SGFASGSKDRVPR 558
D V R
Sbjct: 1475 YRLEGQGADEVFR 1487
>Z82064-3|CAD27611.1| 2920|Caenorhabditis elegans Hypothetical protein
W02B9.1b protein.
Length = 2920
Score = 29.5 bits (63), Expect = 3.5
Identities = 18/73 (24%), Positives = 36/73 (49%)
Frame = +1
Query: 340 NSTGDGSLALRPLEIVAPRIDTYRFSMANLEETQDADLDAILGELCALDSEYDEELSRVS 519
N+T + + + + AP+ + +++ +EE D D+ +L + A D++ DE+ SR+
Sbjct: 1417 NATTNVYIHIEDVNDNAPQFEQQKYATTVIEE--DVDIPKVLFNVHATDADQDEKSSRIV 1474
Query: 520 SGFASGSKDRVPR 558
D V R
Sbjct: 1475 YRLEGQGADEVFR 1487
>AL032638-2|CAD27619.1| 2920|Caenorhabditis elegans Hypothetical
protein W02B9.1b protein.
Length = 2920
Score = 29.5 bits (63), Expect = 3.5
Identities = 18/73 (24%), Positives = 36/73 (49%)
Frame = +1
Query: 340 NSTGDGSLALRPLEIVAPRIDTYRFSMANLEETQDADLDAILGELCALDSEYDEELSRVS 519
N+T + + + + AP+ + +++ +EE D D+ +L + A D++ DE+ SR+
Sbjct: 1417 NATTNVYIHIEDVNDNAPQFEQQKYATTVIEE--DVDIPKVLFNVHATDADQDEKSSRIV 1474
Query: 520 SGFASGSKDRVPR 558
D V R
Sbjct: 1475 YRLEGQGADEVFR 1487
>AJ307058-1|CAC38842.1| 2920|Caenorhabditis elegans HMR-1B protein
protein.
Length = 2920
Score = 29.5 bits (63), Expect = 3.5
Identities = 18/73 (24%), Positives = 36/73 (49%)
Frame = +1
Query: 340 NSTGDGSLALRPLEIVAPRIDTYRFSMANLEETQDADLDAILGELCALDSEYDEELSRVS 519
N+T + + + + AP+ + +++ +EE D D+ +L + A D++ DE+ SR+
Sbjct: 1417 NATTNVYIHIEDVNDNAPQFEQQKYATTVIEE--DVDIPKVLFNVHATDADQDEKSSRIV 1474
Query: 520 SGFASGSKDRVPR 558
D V R
Sbjct: 1475 YRLEGQGADEVFR 1487
>AF039049-12|AAB94245.1| 499|Caenorhabditis elegans Cytochrome p450
family protein 35B3 protein.
Length = 499
Score = 29.5 bits (63), Expect = 3.5
Identities = 17/62 (27%), Positives = 26/62 (41%)
Frame = -3
Query: 309 KPLVQKSFGIVSGGARTDFLYQRHQNNDVFALSH*RYNSRSMPSKKRLAHFFGMSTNKRN 130
+P + + I +G T L H NND+F Y R + + K L KR+
Sbjct: 384 EPTIVNGYEIDAGAVITSQLGALHVNNDIFKDPSKFYPERFIENGKLLNQIIPFGIGKRS 443
Query: 129 CL 124
C+
Sbjct: 444 CV 445
>AF125442-12|AAD12797.1| 260|Caenorhabditis elegans Hypothetical
protein H04M03.12 protein.
Length = 260
Score = 28.3 bits (60), Expect = 8.0
Identities = 20/67 (29%), Positives = 35/67 (52%), Gaps = 3/67 (4%)
Frame = -2
Query: 547 CLLIRMQSLMTL*IILRHIRNRERIVRPEWR--QDQRLAFLR-DLPSRTDRCRCVERLFQ 377
C I + S+ TL H++N R+ R +WR +R++ R LP+ T ++ + Q
Sbjct: 73 CNKITVISIKTL---ENHLKNDSRVRRVKWRHLSSERVSIYRYSLPAITYEMSFIKFIIQ 129
Query: 376 EASELMN 356
E S+L +
Sbjct: 130 EISKLQH 136
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,351,170
Number of Sequences: 27780
Number of extensions: 345214
Number of successful extensions: 1216
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1155
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1216
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2307803960
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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