Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP03_FL5_E22
(866 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY040822-1|AAK77986.1| 499|Homo sapiens U4/U6 snRNP-associated ... 231 3e-60
BC117389-1|AAI17390.1| 499|Homo sapiens PRP31 pre-mRNA processi... 230 4e-60
AK098547-1|BAC05329.1| 364|Homo sapiens protein ( Homo sapiens ... 230 4e-60
AF308303-1|AAG48270.1| 278|Homo sapiens serologically defined b... 229 1e-59
BC032592-1|AAH32592.1| 529|Homo sapiens nucleolar protein NOP5/... 73 1e-12
BC009306-1|AAH09306.1| 522|Homo sapiens NOP5/NOP58 protein prot... 73 1e-12
AF263608-1|AAF91394.1| 529|Homo sapiens nucleolar protein 5 pro... 73 1e-12
AF123534-1|AAD27610.1| 529|Homo sapiens nucleolar protein NOP5/... 73 1e-12
AC064836-1|AAY24145.1| 529|Homo sapiens unknown protein. 73 1e-12
Y12065-1|CAA72789.1| 602|Homo sapiens hNop56 protein. 68 4e-11
BC104793-1|AAI04794.1| 594|Homo sapiens nucleolar protein 5A pr... 68 4e-11
BC104791-1|AAI04792.1| 594|Homo sapiens nucleolar protein 5A (5... 68 4e-11
BC018421-1|AAH18421.1| 447|Homo sapiens Unknown (protein for IM... 68 4e-11
AL049712-4|CAC01444.2| 594|Homo sapiens nucleolar protein 5A (5... 68 4e-11
DQ374434-1|ABD37635.1| 38|Homo sapiens truncated pre-mRNA spli... 59 2e-08
BC064404-1|AAH64404.1| 719|Homo sapiens nucleolar protein 11 pr... 31 4.1
AY598333-1|AAT06744.1| 719|Homo sapiens L14 protein. 31 4.1
AK023702-1|BAB14647.1| 719|Homo sapiens protein ( Homo sapiens ... 31 4.1
AK128544-1|BAC87493.1| 170|Homo sapiens protein ( Homo sapiens ... 31 5.4
>AY040822-1|AAK77986.1| 499|Homo sapiens U4/U6 snRNP-associated 61
kDa protein protein.
Length = 499
Score = 231 bits (564), Expect = 3e-60
Identities = 112/168 (66%), Positives = 136/168 (80%)
Frame = +2
Query: 338 YQLIVEANNVAVEIDGEIAIIHRFVRDKYQKRFPELESLIITPLEYIRTVKELGNDLDRA 517
Y++IV+ANN+ VEI+ E+ IIH+F+RDKY KRFPELESL+ L+YIRTVKELGN LD+
Sbjct: 90 YRVIVDANNLTVEIENELNIIHKFIRDKYSKRFPELESLVPNALDYIRTVKELGNSLDKC 149
Query: 518 KNNEILQSFLTQATIMIVSVTASTTQGKLLSQIELEEINEACDMASELNNFKSQIYEYVE 697
KNNE LQ LT ATIM+VSVTASTTQG+ LS+ ELE ++EACDMA ELN K +IYEYVE
Sbjct: 150 KNNENLQQILTNATIMVVSVTASTTQGQQLSEEELERLDEACDMALELNASKHRIYEYVE 209
Query: 698 SRTTFIAPNITAIVGASTAAKIXVVAGGLSXXSKMPACXVXPPGHXKK 841
SR +FIAPN++ I+GASTAAKI VAGGL+ SKMPAC + G +K
Sbjct: 210 SRMSFIAPNLSIIIGASTAAKIMGVAGGLTNLSKMPACNIMLLGAQRK 257
>BC117389-1|AAI17390.1| 499|Homo sapiens PRP31 pre-mRNA processing
factor 31 homolog (S. cerevisiae) protein.
Length = 499
Score = 230 bits (563), Expect = 4e-60
Identities = 112/168 (66%), Positives = 135/168 (80%)
Frame = +2
Query: 338 YQLIVEANNVAVEIDGEIAIIHRFVRDKYQKRFPELESLIITPLEYIRTVKELGNDLDRA 517
Y++IV+ANN+ VEI+ E+ IIH+F+RDKY KRFPELESL+ L+YIRTVKELGN LD+
Sbjct: 90 YRVIVDANNLTVEIENELNIIHKFIRDKYSKRFPELESLVPNALDYIRTVKELGNSLDKC 149
Query: 518 KNNEILQSFLTQATIMIVSVTASTTQGKLLSQIELEEINEACDMASELNNFKSQIYEYVE 697
KNNE LQ LT ATIM+VSVTASTTQG+ LS+ ELE + EACDMA ELN K +IYEYVE
Sbjct: 150 KNNENLQQILTNATIMVVSVTASTTQGQQLSEEELERLEEACDMALELNASKHRIYEYVE 209
Query: 698 SRTTFIAPNITAIVGASTAAKIXVVAGGLSXXSKMPACXVXPPGHXKK 841
SR +FIAPN++ I+GASTAAKI VAGGL+ SKMPAC + G +K
Sbjct: 210 SRMSFIAPNLSIIIGASTAAKIMGVAGGLTNLSKMPACNIMLLGAQRK 257
>AK098547-1|BAC05329.1| 364|Homo sapiens protein ( Homo sapiens
cDNA FLJ25681 fis, clone TST04131. ).
Length = 364
Score = 230 bits (563), Expect = 4e-60
Identities = 112/168 (66%), Positives = 135/168 (80%)
Frame = +2
Query: 338 YQLIVEANNVAVEIDGEIAIIHRFVRDKYQKRFPELESLIITPLEYIRTVKELGNDLDRA 517
Y++IV+ANN+ VEI+ E+ IIH+F+RDKY KRFPELESL+ L+YIRTVKELGN LD+
Sbjct: 90 YRVIVDANNLTVEIENELNIIHKFIRDKYSKRFPELESLVPNALDYIRTVKELGNSLDKC 149
Query: 518 KNNEILQSFLTQATIMIVSVTASTTQGKLLSQIELEEINEACDMASELNNFKSQIYEYVE 697
KNNE LQ LT ATIM+VSVTASTTQG+ LS+ ELE + EACDMA ELN K +IYEYVE
Sbjct: 150 KNNENLQQILTNATIMVVSVTASTTQGQQLSEEELERLEEACDMALELNASKHRIYEYVE 209
Query: 698 SRTTFIAPNITAIVGASTAAKIXVVAGGLSXXSKMPACXVXPPGHXKK 841
SR +FIAPN++ I+GASTAAKI VAGGL+ SKMPAC + G +K
Sbjct: 210 SRMSFIAPNLSIIIGASTAAKIMGVAGGLTNLSKMPACNIMLLGAQRK 257
>AF308303-1|AAG48270.1| 278|Homo sapiens serologically defined
breast cancer antigen NY-BR-99 protein.
Length = 278
Score = 229 bits (559), Expect = 1e-59
Identities = 111/168 (66%), Positives = 134/168 (79%)
Frame = +2
Query: 338 YQLIVEANNVAVEIDGEIAIIHRFVRDKYQKRFPELESLIITPLEYIRTVKELGNDLDRA 517
Y++IV+ANN+ VEI+ E+ IIH+F+RDKY KRFPELESL+ L+YIRTVKELGN LD+
Sbjct: 10 YRVIVDANNLTVEIENELNIIHKFIRDKYSKRFPELESLVPNALDYIRTVKELGNSLDKC 69
Query: 518 KNNEILQSFLTQATIMIVSVTASTTQGKLLSQIELEEINEACDMASELNNFKSQIYEYVE 697
KNNE LQ LT ATIM+VSVTASTTQG+ LS+ ELE + EACDMA ELN K +IYEYVE
Sbjct: 70 KNNENLQQILTNATIMVVSVTASTTQGQQLSEEELERLEEACDMALELNASKHRIYEYVE 129
Query: 698 SRTTFIAPNITAIVGASTAAKIXVVAGGLSXXSKMPACXVXPPGHXKK 841
SR +FIAPN++ I+GASTAAKI V GGL+ SKMPAC + G +K
Sbjct: 130 SRMSFIAPNLSIIIGASTAAKIMGVGGGLTNLSKMPACNIMLLGAQRK 177
>BC032592-1|AAH32592.1| 529|Homo sapiens nucleolar protein
NOP5/NOP58 protein.
Length = 529
Score = 73.3 bits (172), Expect = 1e-12
Identities = 47/174 (27%), Positives = 86/174 (49%)
Frame = +2
Query: 344 LIVEANNVAVEIDGEIAIIHRFVRDKYQKRFPELESLIITPLEYIRTVKELGNDLDRAKN 523
+IV+A ++ ++D E+ R+ Y FPEL +I L Y + ++++G+ + A
Sbjct: 161 MIVQAISLLDDLDKELNNYIMRCREWYGWHFPELGKIISDNLTYCKCLQKVGDRKNYASA 220
Query: 524 NEILQSFLTQATIMIVSVTASTTQGKLLSQIELEEINEACDMASELNNFKSQIYEYVESR 703
L L + V A + G +S+ ++ I C E++ +++Q+YEY+++R
Sbjct: 221 K--LSELLPEEVEAEVKAAAEISMGTEVSEEDICNILHLCTQVIEISEYRTQLYEYLQNR 278
Query: 704 TTFIAPNITAIVGASTAAKIXVVAGGLSXXSKMPACXVXPPGHXKKPVRLSQAK 865
IAPN+T +VG A++ AG L +K A V G K R +++
Sbjct: 279 MMAIAPNVTVMVGELVGARLIAHAGSLLNLAKHAASTVQILGAEKALFRALKSR 332
>BC009306-1|AAH09306.1| 522|Homo sapiens NOP5/NOP58 protein
protein.
Length = 522
Score = 73.3 bits (172), Expect = 1e-12
Identities = 47/174 (27%), Positives = 86/174 (49%)
Frame = +2
Query: 344 LIVEANNVAVEIDGEIAIIHRFVRDKYQKRFPELESLIITPLEYIRTVKELGNDLDRAKN 523
+IV+A ++ ++D E+ R+ Y FPEL +I L Y + ++++G+ + A
Sbjct: 161 MIVQAISLLDDLDKELNNYIMRCREWYGWHFPELGKIISDNLTYCKCLQKVGDRKNYASA 220
Query: 524 NEILQSFLTQATIMIVSVTASTTQGKLLSQIELEEINEACDMASELNNFKSQIYEYVESR 703
L L + V A + G +S+ ++ I C E++ +++Q+YEY+++R
Sbjct: 221 K--LSELLPEEVEAEVKAAAEISMGTEVSEEDICNILHLCTQVIEISEYRTQLYEYLQNR 278
Query: 704 TTFIAPNITAIVGASTAAKIXVVAGGLSXXSKMPACXVXPPGHXKKPVRLSQAK 865
IAPN+T +VG A++ AG L +K A V G K R +++
Sbjct: 279 MMAIAPNVTVMVGELVGARLIAHAGSLLNLAKHAASTVQILGAEKALFRALKSR 332
>AF263608-1|AAF91394.1| 529|Homo sapiens nucleolar protein 5
protein.
Length = 529
Score = 73.3 bits (172), Expect = 1e-12
Identities = 47/174 (27%), Positives = 86/174 (49%)
Frame = +2
Query: 344 LIVEANNVAVEIDGEIAIIHRFVRDKYQKRFPELESLIITPLEYIRTVKELGNDLDRAKN 523
+IV+A ++ ++D E+ R+ Y FPEL +I L Y + ++++G+ + A
Sbjct: 161 MIVQAISLLDDLDKELNNYIMRCREWYGWHFPELGKIISDNLTYCKCLQKVGDRKNYASA 220
Query: 524 NEILQSFLTQATIMIVSVTASTTQGKLLSQIELEEINEACDMASELNNFKSQIYEYVESR 703
L L + V A + G +S+ ++ I C E++ +++Q+YEY+++R
Sbjct: 221 K--LSELLPEEVEAEVKAAAEISMGTEVSEEDICNILHLCTQVIEISEYRTQLYEYLQNR 278
Query: 704 TTFIAPNITAIVGASTAAKIXVVAGGLSXXSKMPACXVXPPGHXKKPVRLSQAK 865
IAPN+T +VG A++ AG L +K A V G K R +++
Sbjct: 279 MMAIAPNVTVMVGELVGARLIAHAGSLLNLAKHAASTVQILGAEKALFRALKSR 332
>AF123534-1|AAD27610.1| 529|Homo sapiens nucleolar protein
NOP5/NOP58 protein.
Length = 529
Score = 73.3 bits (172), Expect = 1e-12
Identities = 47/174 (27%), Positives = 86/174 (49%)
Frame = +2
Query: 344 LIVEANNVAVEIDGEIAIIHRFVRDKYQKRFPELESLIITPLEYIRTVKELGNDLDRAKN 523
+IV+A ++ ++D E+ R+ Y FPEL +I L Y + ++++G+ + A
Sbjct: 161 MIVQAISLLDDLDKELNNYIMRCREWYGWHFPELGKIISDNLTYCKCLQKVGDRKNYASA 220
Query: 524 NEILQSFLTQATIMIVSVTASTTQGKLLSQIELEEINEACDMASELNNFKSQIYEYVESR 703
L L + V A + G +S+ ++ I C E++ +++Q+YEY+++R
Sbjct: 221 K--LSELLPEEVEAEVKAAAEISMGTEVSEEDICNILHLCTQVIEISEYRTQLYEYLQNR 278
Query: 704 TTFIAPNITAIVGASTAAKIXVVAGGLSXXSKMPACXVXPPGHXKKPVRLSQAK 865
IAPN+T +VG A++ AG L +K A V G K R +++
Sbjct: 279 MMAIAPNVTVMVGELVGARLIAHAGSLLNLAKHAASTVQILGAEKALFRALKSR 332
>AC064836-1|AAY24145.1| 529|Homo sapiens unknown protein.
Length = 529
Score = 73.3 bits (172), Expect = 1e-12
Identities = 47/174 (27%), Positives = 86/174 (49%)
Frame = +2
Query: 344 LIVEANNVAVEIDGEIAIIHRFVRDKYQKRFPELESLIITPLEYIRTVKELGNDLDRAKN 523
+IV+A ++ ++D E+ R+ Y FPEL +I L Y + ++++G+ + A
Sbjct: 161 MIVQAISLLDDLDKELNNYIMRCREWYGWHFPELGKIISDNLTYCKCLQKVGDRKNYASA 220
Query: 524 NEILQSFLTQATIMIVSVTASTTQGKLLSQIELEEINEACDMASELNNFKSQIYEYVESR 703
L L + V A + G +S+ ++ I C E++ +++Q+YEY+++R
Sbjct: 221 K--LSELLPEEVEAEVKAAAEISMGTEVSEEDICNILHLCTQVIEISEYRTQLYEYLQNR 278
Query: 704 TTFIAPNITAIVGASTAAKIXVVAGGLSXXSKMPACXVXPPGHXKKPVRLSQAK 865
IAPN+T +VG A++ AG L +K A V G K R +++
Sbjct: 279 MMAIAPNVTVMVGELVGARLIAHAGSLLNLAKHAASTVQILGAEKALFRALKSR 332
>Y12065-1|CAA72789.1| 602|Homo sapiens hNop56 protein.
Length = 602
Score = 68.1 bits (159), Expect = 4e-11
Identities = 40/167 (23%), Positives = 84/167 (50%), Gaps = 2/167 (1%)
Frame = +2
Query: 344 LIVEANNVAVEIDGEIAIIHRFVRDKYQKRFPELESLIITPLEYIRTVKELGN--DLDRA 517
+I+++ ++ ++D +I VR+ Y FPEL +I Y R + +GN +L+
Sbjct: 173 MIIQSISLLDQLDKDINTFSMRVREWYGYHFPELVKIINDNATYCRLAQFIGNRRELNED 232
Query: 518 KNNEILQSFLTQATIMIVSVTASTTQGKLLSQIELEEINEACDMASELNNFKSQIYEYVE 697
K ++ + + A + + ++ G +S I+L I L+ ++ ++ Y+
Sbjct: 233 KLEKLEELTMDGAKAKAILDASRSSMGMDISAIDLINIESFSSRVVSLSEYRQSLHTYLR 292
Query: 698 SRTTFIAPNITAIVGASTAAKIXVVAGGLSXXSKMPACXVXPPGHXK 838
S+ + +AP+++A++G + A++ AG L+ +K PA V G K
Sbjct: 293 SKMSQVAPSLSALIGEAVGARLIAHAGSLTNLAKYPASTVQILGAEK 339
>BC104793-1|AAI04794.1| 594|Homo sapiens nucleolar protein 5A
protein.
Length = 594
Score = 68.1 bits (159), Expect = 4e-11
Identities = 40/167 (23%), Positives = 84/167 (50%), Gaps = 2/167 (1%)
Frame = +2
Query: 344 LIVEANNVAVEIDGEIAIIHRFVRDKYQKRFPELESLIITPLEYIRTVKELGN--DLDRA 517
+I+++ ++ ++D +I VR+ Y FPEL +I Y R + +GN +L+
Sbjct: 167 MIIQSISLLDQLDKDINTFSMRVREWYGYHFPELVKIINDNATYCRLAQFIGNRRELNED 226
Query: 518 KNNEILQSFLTQATIMIVSVTASTTQGKLLSQIELEEINEACDMASELNNFKSQIYEYVE 697
K ++ + + A + + ++ G +S I+L I L+ ++ ++ Y+
Sbjct: 227 KLEKLEELTMDGAKAKAILDASRSSMGMDISAIDLINIESFSSRVVSLSEYRQSLHTYLR 286
Query: 698 SRTTFIAPNITAIVGASTAAKIXVVAGGLSXXSKMPACXVXPPGHXK 838
S+ + +AP+++A++G + A++ AG L+ +K PA V G K
Sbjct: 287 SKMSQVAPSLSALIGEAVGARLIAHAGSLTNLAKYPASTVQILGAEK 333
>BC104791-1|AAI04792.1| 594|Homo sapiens nucleolar protein 5A
(56kDa with KKE/D repeat) protein.
Length = 594
Score = 68.1 bits (159), Expect = 4e-11
Identities = 40/167 (23%), Positives = 84/167 (50%), Gaps = 2/167 (1%)
Frame = +2
Query: 344 LIVEANNVAVEIDGEIAIIHRFVRDKYQKRFPELESLIITPLEYIRTVKELGN--DLDRA 517
+I+++ ++ ++D +I VR+ Y FPEL +I Y R + +GN +L+
Sbjct: 167 MIIQSISLLDQLDKDINTFSMRVREWYGYHFPELVKIINDNATYCRLAQFIGNRRELNED 226
Query: 518 KNNEILQSFLTQATIMIVSVTASTTQGKLLSQIELEEINEACDMASELNNFKSQIYEYVE 697
K ++ + + A + + ++ G +S I+L I L+ ++ ++ Y+
Sbjct: 227 KLEKLEELTMDGAKAKAILDASRSSMGMDISAIDLINIESFSSRVVSLSEYRQSLHTYLR 286
Query: 698 SRTTFIAPNITAIVGASTAAKIXVVAGGLSXXSKMPACXVXPPGHXK 838
S+ + +AP+++A++G + A++ AG L+ +K PA V G K
Sbjct: 287 SKMSQVAPSLSALIGEAVGARLIAHAGSLTNLAKYPASTVQILGAEK 333
>BC018421-1|AAH18421.1| 447|Homo sapiens Unknown (protein for
IMAGE:4448930) protein.
Length = 447
Score = 68.1 bits (159), Expect = 4e-11
Identities = 40/167 (23%), Positives = 84/167 (50%), Gaps = 2/167 (1%)
Frame = +2
Query: 344 LIVEANNVAVEIDGEIAIIHRFVRDKYQKRFPELESLIITPLEYIRTVKELGN--DLDRA 517
+I+++ ++ ++D +I VR+ Y FPEL +I Y R + +GN +L+
Sbjct: 163 MIIQSISLLDQLDKDINTFSMRVREWYGYHFPELVKIINDNATYCRLAQFIGNRRELNED 222
Query: 518 KNNEILQSFLTQATIMIVSVTASTTQGKLLSQIELEEINEACDMASELNNFKSQIYEYVE 697
K ++ + + A + + ++ G +S I+L I L+ ++ ++ Y+
Sbjct: 223 KLEKLEELTMDGAKAKAILDASRSSMGMDISAIDLINIESFSSRVVSLSEYRQSLHTYLR 282
Query: 698 SRTTFIAPNITAIVGASTAAKIXVVAGGLSXXSKMPACXVXPPGHXK 838
S+ + +AP+++A++G + A++ AG L+ +K PA V G K
Sbjct: 283 SKMSQVAPSLSALIGEAVGARLIAHAGSLTNLAKYPASTVQILGAEK 329
>AL049712-4|CAC01444.2| 594|Homo sapiens nucleolar protein 5A
(56kDa with KKE/D repeat) protein.
Length = 594
Score = 68.1 bits (159), Expect = 4e-11
Identities = 40/167 (23%), Positives = 84/167 (50%), Gaps = 2/167 (1%)
Frame = +2
Query: 344 LIVEANNVAVEIDGEIAIIHRFVRDKYQKRFPELESLIITPLEYIRTVKELGN--DLDRA 517
+I+++ ++ ++D +I VR+ Y FPEL +I Y R + +GN +L+
Sbjct: 167 MIIQSISLLDQLDKDINTFSMRVREWYGYHFPELVKIINDNATYCRLAQFIGNRRELNED 226
Query: 518 KNNEILQSFLTQATIMIVSVTASTTQGKLLSQIELEEINEACDMASELNNFKSQIYEYVE 697
K ++ + + A + + ++ G +S I+L I L+ ++ ++ Y+
Sbjct: 227 KLEKLEELTMDGAKAKAILDASRSSMGMDISAIDLINIESFSSRVVSLSEYRQSLHTYLR 286
Query: 698 SRTTFIAPNITAIVGASTAAKIXVVAGGLSXXSKMPACXVXPPGHXK 838
S+ + +AP+++A++G + A++ AG L+ +K PA V G K
Sbjct: 287 SKMSQVAPSLSALIGEAVGARLIAHAGSLTNLAKYPASTVQILGAEK 333
>DQ374434-1|ABD37635.1| 38|Homo sapiens truncated pre-mRNA
splicing factor protein protein.
Length = 38
Score = 59.3 bits (137), Expect = 2e-08
Identities = 28/36 (77%), Positives = 30/36 (83%)
Frame = +2
Query: 491 ELGNDLDRAKNNEILQSFLTQATIMIVSVTASTTQG 598
ELGN LD+ KNNE LQ LT ATIM+VSVTASTTQG
Sbjct: 1 ELGNSLDKCKNNENLQQILTNATIMVVSVTASTTQG 36
>BC064404-1|AAH64404.1| 719|Homo sapiens nucleolar protein 11
protein.
Length = 719
Score = 31.5 bits (68), Expect = 4.1
Identities = 15/39 (38%), Positives = 22/39 (56%)
Frame = -2
Query: 442 FRKPFLIFVTDKSVNNSYFTINFNSNIICFHNQLIXQGQ 326
FR P LIF+T+K N + FNS I+ + L+ Q +
Sbjct: 162 FRHPVLIFITEKHGNYFAYVQMFNSRILTKYTLLLGQDE 200
>AY598333-1|AAT06744.1| 719|Homo sapiens L14 protein.
Length = 719
Score = 31.5 bits (68), Expect = 4.1
Identities = 15/39 (38%), Positives = 22/39 (56%)
Frame = -2
Query: 442 FRKPFLIFVTDKSVNNSYFTINFNSNIICFHNQLIXQGQ 326
FR P LIF+T+K N + FNS I+ + L+ Q +
Sbjct: 162 FRHPVLIFITEKHGNYFAYVQMFNSRILTKYTLLLGQDE 200
>AK023702-1|BAB14647.1| 719|Homo sapiens protein ( Homo sapiens
cDNA FLJ13640 fis, clone PLACE1011221. ).
Length = 719
Score = 31.5 bits (68), Expect = 4.1
Identities = 15/39 (38%), Positives = 22/39 (56%)
Frame = -2
Query: 442 FRKPFLIFVTDKSVNNSYFTINFNSNIICFHNQLIXQGQ 326
FR P LIF+T+K N + FNS I+ + L+ Q +
Sbjct: 162 FRHPVLIFITEKHGNYFAYVQMFNSRILTKYTLLLGQDE 200
>AK128544-1|BAC87493.1| 170|Homo sapiens protein ( Homo sapiens
cDNA FLJ46703 fis, clone TRACH3014580. ).
Length = 170
Score = 31.1 bits (67), Expect = 5.4
Identities = 16/26 (61%), Positives = 19/26 (73%)
Frame = -3
Query: 564 IIVA*VRKLCNISLFLALSRSLPSSF 487
++VA VR C SLFL LSR LPSS+
Sbjct: 1 MMVALVRICCRFSLFLHLSRLLPSSW 26
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 96,047,551
Number of Sequences: 237096
Number of extensions: 1674078
Number of successful extensions: 3105
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 3004
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3105
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 11095746082
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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