BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP03_FL5_D09
(830 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U69961-1|AAC16257.1| 271|Homo sapiens solurshin protein. 30 8.9
BC106010-1|AAI06011.1| 271|Homo sapiens paired-like homeodomain... 30 8.9
BC013998-1|AAH13998.1| 324|Homo sapiens paired-like homeodomain... 30 8.9
AF238048-1|AAK15048.1| 271|Homo sapiens paired-like homeodomain... 30 8.9
AF048722-1|AAC39718.1| 324|Homo sapiens ALL1 responsive protein... 30 8.9
AF048721-1|AAC39717.1| 317|Homo sapiens ALL1 responsive protein... 30 8.9
AF048720-1|AAC39716.1| 271|Homo sapiens ALL1 responsive protein... 30 8.9
>U69961-1|AAC16257.1| 271|Homo sapiens solurshin protein.
Length = 271
Score = 30.3 bits (65), Expect = 8.9
Identities = 19/47 (40%), Positives = 23/47 (48%)
Frame = +2
Query: 620 SLSDNAFPRFLLVITPPLCSSG*DRPPTFISSHSFRPPLFRSSVEGV 760
SLS +FP F + PL S PP ISS S + S+V GV
Sbjct: 142 SLSTKSFPFFNSMNVNPLSSQSMFSPPNSISSMSMSSSMVPSAVTGV 188
>BC106010-1|AAI06011.1| 271|Homo sapiens paired-like homeodomain 2
protein.
Length = 271
Score = 30.3 bits (65), Expect = 8.9
Identities = 19/47 (40%), Positives = 23/47 (48%)
Frame = +2
Query: 620 SLSDNAFPRFLLVITPPLCSSG*DRPPTFISSHSFRPPLFRSSVEGV 760
SLS +FP F + PL S PP ISS S + S+V GV
Sbjct: 142 SLSTKSFPFFNSMNVNPLSSQSMFSPPNSISSMSMSSSMVPSAVTGV 188
>BC013998-1|AAH13998.1| 324|Homo sapiens paired-like homeodomain
transcription factor 2 protein.
Length = 324
Score = 30.3 bits (65), Expect = 8.9
Identities = 19/47 (40%), Positives = 23/47 (48%)
Frame = +2
Query: 620 SLSDNAFPRFLLVITPPLCSSG*DRPPTFISSHSFRPPLFRSSVEGV 760
SLS +FP F + PL S PP ISS S + S+V GV
Sbjct: 195 SLSTKSFPFFNSMNVNPLSSQSMFSPPNSISSMSMSSSMVPSAVTGV 241
>AF238048-1|AAK15048.1| 271|Homo sapiens paired-like homeodomain
transcription factor 2 protein.
Length = 271
Score = 30.3 bits (65), Expect = 8.9
Identities = 19/47 (40%), Positives = 23/47 (48%)
Frame = +2
Query: 620 SLSDNAFPRFLLVITPPLCSSG*DRPPTFISSHSFRPPLFRSSVEGV 760
SLS +FP F + PL S PP ISS S + S+V GV
Sbjct: 142 SLSTKSFPFFNSMNVNPLSSQSMFSPPNSISSMSMSSSMVPSAVTGV 188
>AF048722-1|AAC39718.1| 324|Homo sapiens ALL1 responsive protein
ARP1c protein.
Length = 324
Score = 30.3 bits (65), Expect = 8.9
Identities = 19/47 (40%), Positives = 23/47 (48%)
Frame = +2
Query: 620 SLSDNAFPRFLLVITPPLCSSG*DRPPTFISSHSFRPPLFRSSVEGV 760
SLS +FP F + PL S PP ISS S + S+V GV
Sbjct: 195 SLSTKSFPFFNSMNVNPLSSQSMFSPPNSISSMSMSSSMVPSAVTGV 241
>AF048721-1|AAC39717.1| 317|Homo sapiens ALL1 responsive protein
ARP1b protein.
Length = 317
Score = 30.3 bits (65), Expect = 8.9
Identities = 19/47 (40%), Positives = 23/47 (48%)
Frame = +2
Query: 620 SLSDNAFPRFLLVITPPLCSSG*DRPPTFISSHSFRPPLFRSSVEGV 760
SLS +FP F + PL S PP ISS S + S+V GV
Sbjct: 188 SLSTKSFPFFNSMNVNPLSSQSMFSPPNSISSMSMSSSMVPSAVTGV 234
>AF048720-1|AAC39716.1| 271|Homo sapiens ALL1 responsive protein
ARP1a protein.
Length = 271
Score = 30.3 bits (65), Expect = 8.9
Identities = 19/47 (40%), Positives = 23/47 (48%)
Frame = +2
Query: 620 SLSDNAFPRFLLVITPPLCSSG*DRPPTFISSHSFRPPLFRSSVEGV 760
SLS +FP F + PL S PP ISS S + S+V GV
Sbjct: 142 SLSTKSFPFFNSMNVNPLSSQSMFSPPNSISSMSMSSSMVPSAVTGV 188
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 119,702,416
Number of Sequences: 237096
Number of extensions: 2660290
Number of successful extensions: 6414
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 6179
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6414
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10426655866
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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