Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP03_FL5_D07
         (860 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Y08417-1|CAA69694.1|  458|Homo sapiens nicotinic acetylcholine r...    31   7.1  
X67513-1|CAA47851.1|  423|Homo sapiens nicotinic  acetylcholine ...    31   7.1  
U83981-1|AAC25631.1|  674|Homo sapiens apoptosis associated prot...    31   7.1  
U62438-1|AAB40116.1|  458|Homo sapiens nicotinic acetylcholine r...    31   7.1  
CR457259-1|CAG33540.1|  674|Homo sapiens PPP1R15A protein.             31   7.1  
BC069788-1|AAH69788.1|  458|Homo sapiens cholinergic receptor, n...    31   7.1  
BC069703-1|AAH69703.1|  458|Homo sapiens cholinergic receptor, n...    31   7.1  
BC069681-1|AAH69681.1|  458|Homo sapiens cholinergic receptor, n...    31   7.1  
BC003067-1|AAH03067.1|  674|Homo sapiens protein phosphatase 1, ...    31   7.1  
AK001361-1|BAA91649.1|  674|Homo sapiens protein ( Homo sapiens ...    31   7.1  
AF140765-1|AAD33063.1|  458|Homo sapiens neuronal acetylcholine ...    31   7.1  

>Y08417-1|CAA69694.1|  458|Homo sapiens nicotinic acetylcholine
           receptor beta3 subunit precursor protein.
          Length = 458

 Score = 30.7 bits (66), Expect = 7.1
 Identities = 16/37 (43%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
 Frame = +1

Query: 328 VSSERLWRPDVVLL-NAXATTAGDYALRARVSNNGSV 435
           V SE LW PD+VL  NA     G    +  V +NG+V
Sbjct: 105 VPSESLWLPDIVLFENADGRFEGSLMTKVIVKSNGTV 141


>X67513-1|CAA47851.1|  423|Homo sapiens nicotinic  acetylcholine
           receptor beta-3 subunit protein.
          Length = 423

 Score = 30.7 bits (66), Expect = 7.1
 Identities = 16/37 (43%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
 Frame = +1

Query: 328 VSSERLWRPDVVLL-NAXATTAGDYALRARVSNNGSV 435
           V SE LW PD+VL  NA     G    +  V +NG+V
Sbjct: 70  VPSESLWLPDIVLFENADGRFEGSLMTKVIVKSNGTV 106


>U83981-1|AAC25631.1|  674|Homo sapiens apoptosis associated protein
           protein.
          Length = 674

 Score = 30.7 bits (66), Expect = 7.1
 Identities = 15/40 (37%), Positives = 18/40 (45%)
 Frame = -2

Query: 418 IHGRGERSPRRWLXPRLAVPRQASTSVPRTPAKCCSPTTP 299
           I+  GE+ P  W  PRL +  Q     P TP     P TP
Sbjct: 511 IYVPGEKPPPPWAPPRLPLRLQRRLKRPETPTHDPDPETP 550


>U62438-1|AAB40116.1|  458|Homo sapiens nicotinic acetylcholine
           receptor beta3 subunit precursor protein.
          Length = 458

 Score = 30.7 bits (66), Expect = 7.1
 Identities = 16/37 (43%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
 Frame = +1

Query: 328 VSSERLWRPDVVLL-NAXATTAGDYALRARVSNNGSV 435
           V SE LW PD+VL  NA     G    +  V +NG+V
Sbjct: 105 VPSESLWLPDIVLFENADGRFEGSLMTKVIVKSNGTV 141


>CR457259-1|CAG33540.1|  674|Homo sapiens PPP1R15A protein.
          Length = 674

 Score = 30.7 bits (66), Expect = 7.1
 Identities = 15/40 (37%), Positives = 18/40 (45%)
 Frame = -2

Query: 418 IHGRGERSPRRWLXPRLAVPRQASTSVPRTPAKCCSPTTP 299
           I+  GE+ P  W  PRL +  Q     P TP     P TP
Sbjct: 511 IYVPGEKPPPPWAPPRLPLRLQRRLKRPETPTHDPDPETP 550


>BC069788-1|AAH69788.1|  458|Homo sapiens cholinergic receptor,
           nicotinic, beta 3 protein.
          Length = 458

 Score = 30.7 bits (66), Expect = 7.1
 Identities = 16/37 (43%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
 Frame = +1

Query: 328 VSSERLWRPDVVLL-NAXATTAGDYALRARVSNNGSV 435
           V SE LW PD+VL  NA     G    +  V +NG+V
Sbjct: 105 VPSESLWLPDIVLFENADGRFEGSLMTKVIVKSNGTV 141


>BC069703-1|AAH69703.1|  458|Homo sapiens cholinergic receptor,
           nicotinic, beta 3 protein.
          Length = 458

 Score = 30.7 bits (66), Expect = 7.1
 Identities = 16/37 (43%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
 Frame = +1

Query: 328 VSSERLWRPDVVLL-NAXATTAGDYALRARVSNNGSV 435
           V SE LW PD+VL  NA     G    +  V +NG+V
Sbjct: 105 VPSESLWLPDIVLFENADGRFEGSLMTKVIVKSNGTV 141


>BC069681-1|AAH69681.1|  458|Homo sapiens cholinergic receptor,
           nicotinic, beta 3 protein.
          Length = 458

 Score = 30.7 bits (66), Expect = 7.1
 Identities = 16/37 (43%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
 Frame = +1

Query: 328 VSSERLWRPDVVLL-NAXATTAGDYALRARVSNNGSV 435
           V SE LW PD+VL  NA     G    +  V +NG+V
Sbjct: 105 VPSESLWLPDIVLFENADGRFEGSLMTKVIVKSNGTV 141


>BC003067-1|AAH03067.1|  674|Homo sapiens protein phosphatase 1,
           regulatory (inhibitor) subunit 15A protein.
          Length = 674

 Score = 30.7 bits (66), Expect = 7.1
 Identities = 15/40 (37%), Positives = 18/40 (45%)
 Frame = -2

Query: 418 IHGRGERSPRRWLXPRLAVPRQASTSVPRTPAKCCSPTTP 299
           I+  GE+ P  W  PRL +  Q     P TP     P TP
Sbjct: 511 IYVPGEKPPPPWAPPRLPLRLQRRLKRPETPTHDPDPETP 550


>AK001361-1|BAA91649.1|  674|Homo sapiens protein ( Homo sapiens
           cDNA FLJ10499 fis, clone NT2RP2000346, weakly similar to
           MYELOID DIFFERENTIATION PRIMARY RESPONSE PROTEIN MYD116.
           ).
          Length = 674

 Score = 30.7 bits (66), Expect = 7.1
 Identities = 15/40 (37%), Positives = 18/40 (45%)
 Frame = -2

Query: 418 IHGRGERSPRRWLXPRLAVPRQASTSVPRTPAKCCSPTTP 299
           I+  GE+ P  W  PRL +  Q     P TP     P TP
Sbjct: 511 IYVPGEKPPPPWAPPRLPLRLQRRLKRPETPTHDPDPETP 550


>AF140765-1|AAD33063.1|  458|Homo sapiens neuronal acetylcholine
           receptor beta-3 subunit precursor protein.
          Length = 458

 Score = 30.7 bits (66), Expect = 7.1
 Identities = 16/37 (43%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
 Frame = +1

Query: 328 VSSERLWRPDVVLL-NAXATTAGDYALRARVSNNGSV 435
           V SE LW PD+VL  NA     G    +  V +NG+V
Sbjct: 105 VPSESLWLPDIVLFENADGRFEGSLMTKVIVKSNGTV 141


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 104,048,839
Number of Sequences: 237096
Number of extensions: 2087987
Number of successful extensions: 4660
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 4285
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4653
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10984231046
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)