Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP03_FL5_D02
(844 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X13382-1|CAA31759.1| 407|Drosophila melanogaster protein ( Dros... 177 2e-44
BT025959-1|ABG02203.1| 233|Drosophila melanogaster IP15855p pro... 177 2e-44
AY069485-1|AAL39630.1| 401|Drosophila melanogaster LD21756p pro... 177 2e-44
AE014297-4196|AAG22173.1| 401|Drosophila melanogaster CG5502-PA... 177 2e-44
X06881-1|CAA29998.1| 123|Drosophila melanogaster protein ( Dros... 128 7e-30
BT010233-1|AAQ23551.1| 947|Drosophila melanogaster RE59472p pro... 32 1.1
BT003626-1|AAO39629.1| 947|Drosophila melanogaster GH01416p pro... 32 1.1
AY166752-1|AAN85714.1| 1400|Drosophila melanogaster loechrig iso... 32 1.1
AY070541-1|AAL48012.1| 1400|Drosophila melanogaster LD22662p pro... 32 1.1
AE014297-2948|AAF55864.2| 1400|Drosophila melanogaster CG17299-P... 32 1.1
AE014297-2944|AAF55860.2| 947|Drosophila melanogaster CG17299-P... 32 1.1
AE014297-2943|AAN13851.1| 947|Drosophila melanogaster CG17299-P... 32 1.1
D21203-1|BAA04745.2| 1408|Drosophila melanogaster large Forked p... 31 2.0
D17528-1|BAA04479.1| 604|Drosophila melanogaster small forked p... 31 2.0
AY113210-1|AAM29215.1| 872|Drosophila melanogaster AT06220p pro... 31 2.6
AE014296-2188|AAF49882.2| 271|Drosophila melanogaster CG17666-P... 31 2.6
AE014296-2187|AAN11857.1| 872|Drosophila melanogaster CG17666-P... 31 2.6
AF175223-1|AAD52614.1| 3469|Drosophila melanogaster SANT domain ... 29 8.0
>X13382-1|CAA31759.1| 407|Drosophila melanogaster protein (
Drosophila melanogastermRNA for put. ribosomal protein
L1. ).
Length = 407
Score = 177 bits (430), Expect = 2e-44
Identities = 83/140 (59%), Positives = 98/140 (70%)
Frame = +3
Query: 174 LPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGG 353
LP VFKAPIRPD+VN+VH + +N+RQ Y VS+ AGHQTSAESWGTGRAVARIPRVRGGG
Sbjct: 27 LPAVFKAPIRPDVVNEVHQLLRRNNRQAYAVSELAGHQTSAESWGTGRAVARIPRVRGGG 86
Query: 354 THRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXXXXXXXXQARGHI 533
THRSGQGAFGNMCRGGRMFAPTK +RRWH Q++GH+
Sbjct: 87 THRSGQGAFGNMCRGGRMFAPTKTFRRWHRKVNVNQRRYALVSAIAASGVPALVQSKGHV 146
Query: 534 IEKIPELPLGCSRQSPRDQQ 593
I+ + E PL S + + Q+
Sbjct: 147 IDGVSEFPLVVSDEVQKVQK 166
Score = 133 bits (321), Expect = 3e-31
Identities = 58/83 (69%), Positives = 74/83 (89%)
Frame = +1
Query: 553 FPWVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQRKGPLI 732
FP VV+D+VQ++ KTKQAVIFLRRLK W+DI KVYKSQR RAG+G MR+RRRI R+GPL+
Sbjct: 153 FPLVVSDEVQKVQKTKQAVIFLRRLKIWADIQKVYKSQRFRAGRGTMRDRRRIARRGPLV 212
Query: 733 IFNKDQGLTRAFRNIPGVELLNV 801
+++KD+GL +AFRNIPG+E +NV
Sbjct: 213 VYDKDEGLRKAFRNIPGIETINV 235
Score = 30.7 bits (66), Expect = 2.6
Identities = 14/18 (77%), Positives = 16/18 (88%)
Frame = +2
Query: 95 MSLSVARPLVSVYSEKSE 148
MSL ARPLVSVY+EK+E
Sbjct: 1 MSLGNARPLVSVYTEKNE 18
>BT025959-1|ABG02203.1| 233|Drosophila melanogaster IP15855p
protein.
Length = 233
Score = 177 bits (430), Expect = 2e-44
Identities = 83/140 (59%), Positives = 98/140 (70%)
Frame = +3
Query: 174 LPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGG 353
LP VFKAPIRPD+VN+VH + +N+RQ Y VS+ AGHQTSAESWGTGRAVARIPRVRGGG
Sbjct: 27 LPAVFKAPIRPDVVNEVHQLLRRNNRQAYAVSELAGHQTSAESWGTGRAVARIPRVRGGG 86
Query: 354 THRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXXXXXXXXQARGHI 533
THRSGQGAFGNMCRGGRMFAPTK +RRWH Q++GH+
Sbjct: 87 THRSGQGAFGNMCRGGRMFAPTKTFRRWHRKVNVNQRRYALVSAIAASGVPALVQSKGHV 146
Query: 534 IEKIPELPLGCSRQSPRDQQ 593
I+ + E PL S + + Q+
Sbjct: 147 IDGVSEFPLVVSDEVQKVQK 166
Score = 123 bits (296), Expect = 4e-28
Identities = 54/76 (71%), Positives = 68/76 (89%)
Frame = +1
Query: 553 FPWVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQRKGPLI 732
FP VV+D+VQ++ KTKQAVIFLRRLK W+DI KVYKSQR RAG+G MR+RRRI R+GPL+
Sbjct: 153 FPLVVSDEVQKVQKTKQAVIFLRRLKIWADIQKVYKSQRFRAGRGTMRDRRRIARRGPLV 212
Query: 733 IFNKDQGLTRAFRNIP 780
+++KD+GL +AFRNIP
Sbjct: 213 VYDKDEGLRKAFRNIP 228
Score = 30.7 bits (66), Expect = 2.6
Identities = 14/18 (77%), Positives = 16/18 (88%)
Frame = +2
Query: 95 MSLSVARPLVSVYSEKSE 148
MSL ARPLVSVY+EK+E
Sbjct: 1 MSLGNARPLVSVYTEKNE 18
>AY069485-1|AAL39630.1| 401|Drosophila melanogaster LD21756p
protein.
Length = 401
Score = 177 bits (430), Expect = 2e-44
Identities = 83/140 (59%), Positives = 98/140 (70%)
Frame = +3
Query: 174 LPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGG 353
LP VFKAPIRPD+VN+VH + +N+RQ Y VS+ AGHQTSAESWGTGRAVARIPRVRGGG
Sbjct: 27 LPAVFKAPIRPDVVNEVHQLLRRNNRQAYAVSELAGHQTSAESWGTGRAVARIPRVRGGG 86
Query: 354 THRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXXXXXXXXQARGHI 533
THRSGQGAFGNMCRGGRMFAPTK +RRWH Q++GH+
Sbjct: 87 THRSGQGAFGNMCRGGRMFAPTKTFRRWHRKVNVNQRRYALVSAIAASGVPALVQSKGHV 146
Query: 534 IEKIPELPLGCSRQSPRDQQ 593
I+ + E PL S + + Q+
Sbjct: 147 IDGVSEFPLVVSDEVQKVQK 166
Score = 133 bits (321), Expect = 3e-31
Identities = 58/83 (69%), Positives = 74/83 (89%)
Frame = +1
Query: 553 FPWVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQRKGPLI 732
FP VV+D+VQ++ KTKQAVIFLRRLK W+DI KVYKSQR RAG+G MR+RRRI R+GPL+
Sbjct: 153 FPLVVSDEVQKVQKTKQAVIFLRRLKIWADIQKVYKSQRFRAGRGTMRDRRRIARRGPLV 212
Query: 733 IFNKDQGLTRAFRNIPGVELLNV 801
+++KD+GL +AFRNIPG+E +NV
Sbjct: 213 VYDKDEGLRKAFRNIPGIETINV 235
Score = 30.7 bits (66), Expect = 2.6
Identities = 14/18 (77%), Positives = 16/18 (88%)
Frame = +2
Query: 95 MSLSVARPLVSVYSEKSE 148
MSL ARPLVSVY+EK+E
Sbjct: 1 MSLGNARPLVSVYTEKNE 18
>AE014297-4196|AAG22173.1| 401|Drosophila melanogaster CG5502-PA
protein.
Length = 401
Score = 177 bits (430), Expect = 2e-44
Identities = 83/140 (59%), Positives = 98/140 (70%)
Frame = +3
Query: 174 LPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGG 353
LP VFKAPIRPD+VN+VH + +N+RQ Y VS+ AGHQTSAESWGTGRAVARIPRVRGGG
Sbjct: 27 LPAVFKAPIRPDVVNEVHQLLRRNNRQAYAVSELAGHQTSAESWGTGRAVARIPRVRGGG 86
Query: 354 THRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXXXXXXXXQARGHI 533
THRSGQGAFGNMCRGGRMFAPTK +RRWH Q++GH+
Sbjct: 87 THRSGQGAFGNMCRGGRMFAPTKTFRRWHRKVNVNQRRYALVSAIAASGVPALVQSKGHV 146
Query: 534 IEKIPELPLGCSRQSPRDQQ 593
I+ + E PL S + + Q+
Sbjct: 147 IDGVSEFPLVVSDEVQKVQK 166
Score = 133 bits (321), Expect = 3e-31
Identities = 58/83 (69%), Positives = 74/83 (89%)
Frame = +1
Query: 553 FPWVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQRKGPLI 732
FP VV+D+VQ++ KTKQAVIFLRRLK W+DI KVYKSQR RAG+G MR+RRRI R+GPL+
Sbjct: 153 FPLVVSDEVQKVQKTKQAVIFLRRLKIWADIQKVYKSQRFRAGRGTMRDRRRIARRGPLV 212
Query: 733 IFNKDQGLTRAFRNIPGVELLNV 801
+++KD+GL +AFRNIPG+E +NV
Sbjct: 213 VYDKDEGLRKAFRNIPGIETINV 235
Score = 30.7 bits (66), Expect = 2.6
Identities = 14/18 (77%), Positives = 16/18 (88%)
Frame = +2
Query: 95 MSLSVARPLVSVYSEKSE 148
MSL ARPLVSVY+EK+E
Sbjct: 1 MSLGNARPLVSVYTEKNE 18
>X06881-1|CAA29998.1| 123|Drosophila melanogaster protein (
Drosophila gene forribosomal protein L1 fragment. ).
Length = 123
Score = 128 bits (310), Expect = 7e-30
Identities = 60/104 (57%), Positives = 69/104 (66%)
Frame = +3
Query: 282 HQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXX 461
HQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK +RRWH
Sbjct: 1 HQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTFRRWHRRVNVNQ 60
Query: 462 XXXXXXXXXXXXXXXXXXQARGHIIEKIPELPLGCSRQSPRDQQ 593
Q++GH+I+ + E PL S + + Q+
Sbjct: 61 RRYALVSAIAASGVPALVQSKGHVIDGVSEFPLVVSDEVQKVQK 104
Score = 54.4 bits (125), Expect = 2e-07
Identities = 24/33 (72%), Positives = 29/33 (87%)
Frame = +1
Query: 553 FPWVVADKVQEINKTKQAVIFLRRLKAWSDILK 651
FP VV+D+VQ++ KTKQAVIFLRRLK W+DI K
Sbjct: 91 FPLVVSDEVQKVQKTKQAVIFLRRLKIWADIQK 123
>BT010233-1|AAQ23551.1| 947|Drosophila melanogaster RE59472p
protein.
Length = 947
Score = 31.9 bits (69), Expect = 1.1
Identities = 24/77 (31%), Positives = 30/77 (38%)
Frame = +3
Query: 177 PFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGGT 356
P +F RP +D K+ P A T + S GTG A + GG
Sbjct: 228 PTIFDV-FRPRAKSDAKRQKEKHLLDPSSADSSATSSTYSVSGGTGPATSSAAGGAGGAA 286
Query: 357 HRSGQGAFGNMCRGGRM 407
+GQGA G GG M
Sbjct: 287 AAAGQGAAGG--AGGLM 301
>BT003626-1|AAO39629.1| 947|Drosophila melanogaster GH01416p
protein.
Length = 947
Score = 31.9 bits (69), Expect = 1.1
Identities = 24/77 (31%), Positives = 30/77 (38%)
Frame = +3
Query: 177 PFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGGT 356
P +F RP +D K+ P A T + S GTG A + GG
Sbjct: 228 PTIFDV-FRPRAKSDAKRQKEKHLLDPSSADSSATSSTYSVSGGTGPATSSAAGGAGGAA 286
Query: 357 HRSGQGAFGNMCRGGRM 407
+GQGA G GG M
Sbjct: 287 AAAGQGAAGG--AGGLM 301
>AY166752-1|AAN85714.1| 1400|Drosophila melanogaster loechrig
isoform I protein.
Length = 1400
Score = 31.9 bits (69), Expect = 1.1
Identities = 24/77 (31%), Positives = 30/77 (38%)
Frame = +3
Query: 177 PFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGGT 356
P +F RP +D K+ P A T + S GTG A + GG
Sbjct: 681 PTIFDV-FRPRAKSDAKRQKEKHLLDPSSADSSATSSTYSVSGGTGPATSSAAGGAGGAA 739
Query: 357 HRSGQGAFGNMCRGGRM 407
+GQGA G GG M
Sbjct: 740 AAAGQGAAGG--AGGLM 754
>AY070541-1|AAL48012.1| 1400|Drosophila melanogaster LD22662p
protein.
Length = 1400
Score = 31.9 bits (69), Expect = 1.1
Identities = 24/77 (31%), Positives = 30/77 (38%)
Frame = +3
Query: 177 PFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGGT 356
P +F RP +D K+ P A T + S GTG A + GG
Sbjct: 681 PTIFDV-FRPRAKSDAKRQKEKHLLDPSSADSSATSSTYSVSGGTGPATSSAAGGAGGAA 739
Query: 357 HRSGQGAFGNMCRGGRM 407
+GQGA G GG M
Sbjct: 740 AAAGQGAAGG--AGGLM 754
>AE014297-2948|AAF55864.2| 1400|Drosophila melanogaster CG17299-PF,
isoform F protein.
Length = 1400
Score = 31.9 bits (69), Expect = 1.1
Identities = 24/77 (31%), Positives = 30/77 (38%)
Frame = +3
Query: 177 PFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGGT 356
P +F RP +D K+ P A T + S GTG A + GG
Sbjct: 681 PTIFDV-FRPRAKSDAKRQKEKHLLDPSSADSSATSSTYSVSGGTGPATSSAAGGAGGAA 739
Query: 357 HRSGQGAFGNMCRGGRM 407
+GQGA G GG M
Sbjct: 740 AAAGQGAAGG--AGGLM 754
>AE014297-2944|AAF55860.2| 947|Drosophila melanogaster CG17299-PB,
isoform B protein.
Length = 947
Score = 31.9 bits (69), Expect = 1.1
Identities = 24/77 (31%), Positives = 30/77 (38%)
Frame = +3
Query: 177 PFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGGT 356
P +F RP +D K+ P A T + S GTG A + GG
Sbjct: 228 PTIFDV-FRPRAKSDAKRQKEKHLLDPSSADSSATSSTYSVSGGTGPATSSAAGGAGGAA 286
Query: 357 HRSGQGAFGNMCRGGRM 407
+GQGA G GG M
Sbjct: 287 AAAGQGAAGG--AGGLM 301
>AE014297-2943|AAN13851.1| 947|Drosophila melanogaster CG17299-PA,
isoform A protein.
Length = 947
Score = 31.9 bits (69), Expect = 1.1
Identities = 24/77 (31%), Positives = 30/77 (38%)
Frame = +3
Query: 177 PFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGGT 356
P +F RP +D K+ P A T + S GTG A + GG
Sbjct: 228 PTIFDV-FRPRAKSDAKRQKEKHLLDPSSADSSATSSTYSVSGGTGPATSSAAGGAGGAA 286
Query: 357 HRSGQGAFGNMCRGGRM 407
+GQGA G GG M
Sbjct: 287 AAAGQGAAGG--AGGLM 301
>D21203-1|BAA04745.2| 1408|Drosophila melanogaster large Forked
protein protein.
Length = 1408
Score = 31.1 bits (67), Expect = 2.0
Identities = 14/44 (31%), Positives = 18/44 (40%)
Frame = -2
Query: 402 VHHDTCYRRHPDRTYEYHHHGHAEFGRQHVQYPMIQHWFGDQPP 271
+ TC R P + H H H H +P H G+QPP
Sbjct: 1010 IRRTTCRYRSPSSRHP-HQHQHHPHPHPHPHHPHQLHGMGEQPP 1052
>D17528-1|BAA04479.1| 604|Drosophila melanogaster small forked
protein protein.
Length = 604
Score = 31.1 bits (67), Expect = 2.0
Identities = 14/44 (31%), Positives = 18/44 (40%)
Frame = -2
Query: 402 VHHDTCYRRHPDRTYEYHHHGHAEFGRQHVQYPMIQHWFGDQPP 271
+ TC R P + H H H H +P H G+QPP
Sbjct: 209 IRRTTCRYRSPSSRHP-HQHQHHPHPHPHPHHPHQLHGMGEQPP 251
>AY113210-1|AAM29215.1| 872|Drosophila melanogaster AT06220p
protein.
Length = 872
Score = 30.7 bits (66), Expect = 2.6
Identities = 11/22 (50%), Positives = 14/22 (63%), Gaps = 1/22 (4%)
Frame = +2
Query: 314 TCCRP-NSACPWWWYS*VRSGC 376
TCC P ++ CPW WY +GC
Sbjct: 718 TCCMPCSNQCPWSWYYNPCTGC 739
>AE014296-2188|AAF49882.2| 271|Drosophila melanogaster CG17666-PB,
isoform B protein.
Length = 271
Score = 30.7 bits (66), Expect = 2.6
Identities = 11/22 (50%), Positives = 14/22 (63%), Gaps = 1/22 (4%)
Frame = +2
Query: 314 TCCRP-NSACPWWWYS*VRSGC 376
TCC P ++ CPW WY +GC
Sbjct: 117 TCCMPCSNQCPWSWYYNPCTGC 138
>AE014296-2187|AAN11857.1| 872|Drosophila melanogaster CG17666-PA,
isoform A protein.
Length = 872
Score = 30.7 bits (66), Expect = 2.6
Identities = 11/22 (50%), Positives = 14/22 (63%), Gaps = 1/22 (4%)
Frame = +2
Query: 314 TCCRP-NSACPWWWYS*VRSGC 376
TCC P ++ CPW WY +GC
Sbjct: 718 TCCMPCSNQCPWSWYYNPCTGC 739
>AF175223-1|AAD52614.1| 3469|Drosophila melanogaster SANT domain
protein SMRTER protein.
Length = 3469
Score = 29.1 bits (62), Expect = 8.0
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = -2
Query: 831 PEPASGGSACNIQELHTXDVAEGASQTLILVEDY 730
P SGGSA + Q++HT + G I+ DY
Sbjct: 2991 PTSQSGGSAPSPQQIHTKSITFGELTDSIITSDY 3024
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 38,784,983
Number of Sequences: 53049
Number of extensions: 846879
Number of successful extensions: 4547
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 3386
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4402
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4024321392
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -