Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP03_FL5_B24
(899 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ986374-1|ABJ15760.1| 447|Homo sapiens T-box transcription fac... 33 1.4
X89894-1|CAA61984.1| 443|Homo sapiens nuclear receptor protein. 31 4.3
S81243-1|AAB36006.1| 684|Homo sapiens CHN protein. 31 4.3
D78579-1|BAA11419.1| 626|Homo sapiens neuron derived orphan rec... 31 4.3
AL359710-3|CAI95139.1| 443|Homo sapiens nuclear receptor subfam... 31 4.3
AL359710-2|CAI95138.1| 626|Homo sapiens nuclear receptor subfam... 31 4.3
AL359710-1|CAM16648.1| 637|Homo sapiens nuclear receptor subfam... 31 4.3
AL358937-4|CAI95320.1| 626|Homo sapiens nuclear receptor subfam... 31 4.3
AL358937-3|CAM22558.1| 637|Homo sapiens nuclear receptor subfam... 31 4.3
BC061631-1|AAH61631.1| 1686|Homo sapiens ADAM metallopeptidase w... 31 7.5
AY327122-1|AAQ94616.1| 1686|Homo sapiens COMPase precursor protein. 31 7.5
AB033111-1|BAA86599.1| 785|Homo sapiens KIAA1285 protein protein. 31 7.5
>DQ986374-1|ABJ15760.1| 447|Homo sapiens T-box transcription factor
TBX20 isoform A protein.
Length = 447
Score = 33.1 bits (72), Expect = 1.4
Identities = 18/49 (36%), Positives = 27/49 (55%), Gaps = 2/49 (4%)
Frame = +2
Query: 518 PYASSHPPLAISA--TSTRSSNPRXPYTNHPRLNIHFHQSPDAVLKGVR 658
PY+ PL SA +S + S P P + PR + +F Q P A ++G+R
Sbjct: 389 PYSRLGMPLTPSAIASSMQGSGPTFPSFHMPRYHHYFQQGPYAAIQGLR 437
>X89894-1|CAA61984.1| 443|Homo sapiens nuclear receptor protein.
Length = 443
Score = 31.5 bits (68), Expect = 4.3
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +3
Query: 252 FQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKI 413
+ +L DL TE + + T SLP++S+ ++GY Y + V P +K+
Sbjct: 35 YTKLTMDLGSTEITATATT--SLPSISTFVEGYSSNYELKPSCVYQMQRPLIKV 86
>S81243-1|AAB36006.1| 684|Homo sapiens CHN protein.
Length = 684
Score = 31.5 bits (68), Expect = 4.3
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +3
Query: 252 FQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKI 413
+ +L DL TE + + T SLP++S+ ++GY Y + V P +K+
Sbjct: 93 YTKLTMDLGSTEITATATT--SLPSISTFVEGYSSNYELKPSCVYQMQRPLIKV 144
>D78579-1|BAA11419.1| 626|Homo sapiens neuron derived orphan
receptor protein.
Length = 626
Score = 31.5 bits (68), Expect = 4.3
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +3
Query: 252 FQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKI 413
+ +L DL TE + + T SLP++S+ ++GY Y + V P +K+
Sbjct: 35 YTKLTMDLGSTEITATATT--SLPSISTFVEGYSSNYELKPSCVYQMQRPLIKV 86
>AL359710-3|CAI95139.1| 443|Homo sapiens nuclear receptor subfamily
4, group A, member 3 protein.
Length = 443
Score = 31.5 bits (68), Expect = 4.3
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +3
Query: 252 FQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKI 413
+ +L DL TE + + T SLP++S+ ++GY Y + V P +K+
Sbjct: 35 YTKLTMDLGSTEITATATT--SLPSISTFVEGYSSNYELKPSCVYQMQRPLIKV 86
>AL359710-2|CAI95138.1| 626|Homo sapiens nuclear receptor subfamily
4, group A, member 3 protein.
Length = 626
Score = 31.5 bits (68), Expect = 4.3
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +3
Query: 252 FQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKI 413
+ +L DL TE + + T SLP++S+ ++GY Y + V P +K+
Sbjct: 35 YTKLTMDLGSTEITATATT--SLPSISTFVEGYSSNYELKPSCVYQMQRPLIKV 86
>AL359710-1|CAM16648.1| 637|Homo sapiens nuclear receptor subfamily
4, group A, member 3 protein.
Length = 637
Score = 31.5 bits (68), Expect = 4.3
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +3
Query: 252 FQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKI 413
+ +L DL TE + + T SLP++S+ ++GY Y + V P +K+
Sbjct: 46 YTKLTMDLGSTEITATATT--SLPSISTFVEGYSSNYELKPSCVYQMQRPLIKV 97
>AL358937-4|CAI95320.1| 626|Homo sapiens nuclear receptor subfamily
4, group A, member 3 protein.
Length = 626
Score = 31.5 bits (68), Expect = 4.3
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +3
Query: 252 FQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKI 413
+ +L DL TE + + T SLP++S+ ++GY Y + V P +K+
Sbjct: 35 YTKLTMDLGSTEITATATT--SLPSISTFVEGYSSNYELKPSCVYQMQRPLIKV 86
>AL358937-3|CAM22558.1| 637|Homo sapiens nuclear receptor subfamily
4, group A, member 3 protein.
Length = 637
Score = 31.5 bits (68), Expect = 4.3
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +3
Query: 252 FQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKI 413
+ +L DL TE + + T SLP++S+ ++GY Y + V P +K+
Sbjct: 46 YTKLTMDLGSTEITATATT--SLPSISTFVEGYSSNYELKPSCVYQMQRPLIKV 97
>BC061631-1|AAH61631.1| 1686|Homo sapiens ADAM metallopeptidase with
thrombospondin type 1 motif, 7 protein.
Length = 1686
Score = 30.7 bits (66), Expect = 7.5
Identities = 25/85 (29%), Positives = 35/85 (41%), Gaps = 3/85 (3%)
Frame = +3
Query: 396 APSLKIPVTVDLCWTTADVTVEGVNVLATPSSSRITIGGLALMHQATLPWRSRLHQ---P 566
AP L +P L W V+ +G+ ATP S G Q PWR R ++
Sbjct: 1166 APDLGLP---SLSWPR--VSTDGLQTPATPESQNDFPVGKDSQSQLPPPWRDRTNEVFKD 1220
Query: 567 DHQIPXFHTPTTPDLTSISINPLTP 641
D + P P S ++ PL+P
Sbjct: 1221 DEEPKGRGAPHLPPRPSSTLPPLSP 1245
>AY327122-1|AAQ94616.1| 1686|Homo sapiens COMPase precursor protein.
Length = 1686
Score = 30.7 bits (66), Expect = 7.5
Identities = 25/85 (29%), Positives = 35/85 (41%), Gaps = 3/85 (3%)
Frame = +3
Query: 396 APSLKIPVTVDLCWTTADVTVEGVNVLATPSSSRITIGGLALMHQATLPWRSRLHQ---P 566
AP L +P L W V+ +G+ ATP S G Q PWR R ++
Sbjct: 1166 APDLGLP---SLSWPR--VSTDGLQTPATPESQNDFPVGKDSQSQLPPPWRDRTNEVFKD 1220
Query: 567 DHQIPXFHTPTTPDLTSISINPLTP 641
D + P P S ++ PL+P
Sbjct: 1221 DEEPKGRGAPHLPPRPSSTLPPLSP 1245
>AB033111-1|BAA86599.1| 785|Homo sapiens KIAA1285 protein protein.
Length = 785
Score = 30.7 bits (66), Expect = 7.5
Identities = 13/44 (29%), Positives = 23/44 (52%)
Frame = +3
Query: 558 HQPDHQIPXFHTPTTPDLTSISINPLTPY*KEFAPGLKPPLSSE 689
H P HQ H+P P+ ++++P P + P L+ P+S +
Sbjct: 145 HSPHHQEAPVHSPEAPEKDPLTLSPTVPE-TDMDPLLQSPVSQK 187
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 116,430,738
Number of Sequences: 237096
Number of extensions: 2450610
Number of successful extensions: 6373
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 6022
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6369
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11603768198
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -