Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP03_FL5_B09
         (844 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.          24   2.0  
EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.      24   2.0  
AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              22   6.2  
EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          22   8.1  
EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      22   8.1  
AJ276511-1|CAC06383.1|  352|Apis mellifera Antennapedia protein ...    22   8.1  

>EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.
          Length = 686

 Score = 23.8 bits (49), Expect = 2.0
 Identities = 9/24 (37%), Positives = 15/24 (62%)
 Frame = +3

Query: 621 GKRCNKLLFMSSVEDSNLPSVKLP 692
           G R     F+SS+++SN  S ++P
Sbjct: 615 GMRYKMFFFLSSMDESNTKSYEIP 638


>EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.
          Length = 686

 Score = 23.8 bits (49), Expect = 2.0
 Identities = 9/24 (37%), Positives = 15/24 (62%)
 Frame = +3

Query: 621 GKRCNKLLFMSSVEDSNLPSVKLP 692
           G R     F+SS+++SN  S ++P
Sbjct: 615 GMRYKMFFFLSSMDESNTKSYEIP 638


>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 22.2 bits (45), Expect = 6.2
 Identities = 12/31 (38%), Positives = 14/31 (45%)
 Frame = +1

Query: 586 MRKRPNT*RPRGGSGAINYSS*AALKTATCH 678
           MRK P   RP   S    Y++   L  A CH
Sbjct: 107 MRKCPRRHRPVCASNGKIYANHCELHRAACH 137


>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 21.8 bits (44), Expect = 8.1
 Identities = 10/19 (52%), Positives = 11/19 (57%)
 Frame = +1

Query: 361 DLVLRTYY*HPRQAQGMWL 417
           D+ L TYY   RQA   WL
Sbjct: 226 DIGLNTYYFFLRQAFPFWL 244


>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 21.8 bits (44), Expect = 8.1
 Identities = 10/19 (52%), Positives = 11/19 (57%)
 Frame = +1

Query: 361 DLVLRTYY*HPRQAQGMWL 417
           D+ L TYY   RQA   WL
Sbjct: 226 DIGLNTYYFFLRQAFPFWL 244


>AJ276511-1|CAC06383.1|  352|Apis mellifera Antennapedia protein
           protein.
          Length = 352

 Score = 21.8 bits (44), Expect = 8.1
 Identities = 8/17 (47%), Positives = 9/17 (52%)
 Frame = -3

Query: 332 HKSTTHHPTFQVQDGVH 282
           H+  T HP  Q Q G H
Sbjct: 170 HQMHTQHPHMQPQQGQH 186


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 246,061
Number of Sequences: 438
Number of extensions: 5634
Number of successful extensions: 11
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 27067071
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)