Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP02_T7_P24
         (841 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC033821-1|AAH33821.1|  616|Homo sapiens chromosome 16 open read...    31   5.2  
BC032400-1|AAH32400.1|  553|Homo sapiens C16orf44 protein protein.     31   5.2  
AK074056-1|BAB84882.1|  296|Homo sapiens FLJ00127 protein protein.     31   6.9  
AK022605-1|BAB14124.1|  616|Homo sapiens protein ( Homo sapiens ...    30   9.1  

>BC033821-1|AAH33821.1|  616|Homo sapiens chromosome 16 open reading
           frame 44 protein.
          Length = 616

 Score = 31.1 bits (67), Expect = 5.2
 Identities = 16/30 (53%), Positives = 18/30 (60%)
 Frame = +2

Query: 581 RTPSSTASGD*WKWMLSLGWLVYGIGGFDD 670
           R P +TA G  W  M SLG  +Y IGG DD
Sbjct: 476 RRPMTTARG--WHSMCSLGDSIYSIGGSDD 503


>BC032400-1|AAH32400.1|  553|Homo sapiens C16orf44 protein protein.
          Length = 553

 Score = 31.1 bits (67), Expect = 5.2
 Identities = 16/30 (53%), Positives = 18/30 (60%)
 Frame = +2

Query: 581 RTPSSTASGD*WKWMLSLGWLVYGIGGFDD 670
           R P +TA G  W  M SLG  +Y IGG DD
Sbjct: 413 RRPMTTARG--WHSMCSLGDSIYSIGGSDD 440


>AK074056-1|BAB84882.1|  296|Homo sapiens FLJ00127 protein protein.
          Length = 296

 Score = 30.7 bits (66), Expect = 6.9
 Identities = 16/30 (53%), Positives = 18/30 (60%)
 Frame = +2

Query: 581 RTPSSTASGD*WKWMLSLGWLVYGIGGFDD 670
           R P +TA G  W  M SLG  +Y IGG DD
Sbjct: 156 RRPMTTARG--WHSMSSLGDSIYSIGGSDD 183


>AK022605-1|BAB14124.1|  616|Homo sapiens protein ( Homo sapiens
           cDNA FLJ12543 fis, clone NT2RM4000590, weakly similar to
           RING CANAL PROTEIN. ).
          Length = 616

 Score = 30.3 bits (65), Expect = 9.1
 Identities = 16/30 (53%), Positives = 18/30 (60%)
 Frame = +2

Query: 581 RTPSSTASGD*WKWMLSLGWLVYGIGGFDD 670
           R P +TA G  W  M SLG  +Y IGG DD
Sbjct: 476 RRPMTTARG--WHSMCSLGDGIYSIGGSDD 503


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 110,622,484
Number of Sequences: 237096
Number of extensions: 2362109
Number of successful extensions: 5550
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5245
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5548
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10593928420
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)