Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP02_T7_P24
         (841 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z68296-5|CAD59142.2| 1677|Caenorhabditis elegans Hypothetical pr...    39   0.005
Z68296-4|CAA92591.3| 1838|Caenorhabditis elegans Hypothetical pr...    39   0.005
Z50756-4|CAA90639.1|  482|Caenorhabditis elegans Hypothetical pr...    28   7.2  
Z50741-5|CAA90612.1|  482|Caenorhabditis elegans Hypothetical pr...    28   7.2  
AL117195-31|CAN99709.1| 1459|Caenorhabditis elegans Hypothetical...    28   9.5  
AL117195-30|CAB60772.3| 1456|Caenorhabditis elegans Hypothetical...    28   9.5  

>Z68296-5|CAD59142.2| 1677|Caenorhabditis elegans Hypothetical
           protein C46C2.1b protein.
          Length = 1677

 Score = 38.7 bits (86), Expect = 0.005
 Identities = 22/52 (42%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
 Frame = -2

Query: 645 TNHPRLNIHFHQSPDAVLEGVRAGVKPP-LSSEAPSAYLTPSSLGMAKGVSP 493
           TNHP LN H  + P A++ G   G  PP L S   +A  TP   G A  +SP
Sbjct: 147 TNHPHLNHHVSRIPQAIVTGGTNGSLPPLLISPTSAAAATPLISGKAGPMSP 198


>Z68296-4|CAA92591.3| 1838|Caenorhabditis elegans Hypothetical
           protein C46C2.1a protein.
          Length = 1838

 Score = 38.7 bits (86), Expect = 0.005
 Identities = 22/52 (42%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
 Frame = -2

Query: 645 TNHPRLNIHFHQSPDAVLEGVRAGVKPP-LSSEAPSAYLTPSSLGMAKGVSP 493
           TNHP LN H  + P A++ G   G  PP L S   +A  TP   G A  +SP
Sbjct: 147 TNHPHLNHHVSRIPQAIVTGGTNGSLPPLLISPTSAAAATPLISGKAGPMSP 198


>Z50756-4|CAA90639.1|  482|Caenorhabditis elegans Hypothetical
           protein T08D10.1 protein.
          Length = 482

 Score = 28.3 bits (60), Expect = 7.2
 Identities = 14/53 (26%), Positives = 24/53 (45%)
 Frame = -2

Query: 663 NPPIPYTNHPRLNIHFHQSPDAVLEGVRAGVKPPLSSEAPSAYLTPSSLGMAK 505
           NP  P T+ P +    HQ P    +  +A V     ++   +  TP+S+  A+
Sbjct: 65  NPSPPATSSPNVQTQCHQPPVVRSQTHQASVSQTTPTQTTPSQYTPASVSTAR 117


>Z50741-5|CAA90612.1|  482|Caenorhabditis elegans Hypothetical
           protein T08D10.1 protein.
          Length = 482

 Score = 28.3 bits (60), Expect = 7.2
 Identities = 14/53 (26%), Positives = 24/53 (45%)
 Frame = -2

Query: 663 NPPIPYTNHPRLNIHFHQSPDAVLEGVRAGVKPPLSSEAPSAYLTPSSLGMAK 505
           NP  P T+ P +    HQ P    +  +A V     ++   +  TP+S+  A+
Sbjct: 65  NPSPPATSSPNVQTQCHQPPVVRSQTHQASVSQTTPTQTTPSQYTPASVSTAR 117


>AL117195-31|CAN99709.1| 1459|Caenorhabditis elegans Hypothetical
            protein Y57A10A.18b protein.
          Length = 1459

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 11/25 (44%), Positives = 17/25 (68%)
 Frame = -2

Query: 564  PLSSEAPSAYLTPSSLGMAKGVSPP 490
            P+++EAP+A   PS   + +G SPP
Sbjct: 1203 PVAAEAPAAAAAPSRARVPRGPSPP 1227


>AL117195-30|CAB60772.3| 1456|Caenorhabditis elegans Hypothetical
            protein Y57A10A.18a protein.
          Length = 1456

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 11/25 (44%), Positives = 17/25 (68%)
 Frame = -2

Query: 564  PLSSEAPSAYLTPSSLGMAKGVSPP 490
            P+++EAP+A   PS   + +G SPP
Sbjct: 1203 PVAAEAPAAAAAPSRARVPRGPSPP 1227


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,680,967
Number of Sequences: 27780
Number of extensions: 337847
Number of successful extensions: 988
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 937
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 988
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2077023564
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)