Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP02_T7_P17
         (843 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81593-10|CAI94504.1|  349|Caenorhabditis elegans Hypothetical p...    31   1.4  
AL117195-31|CAN99709.1| 1459|Caenorhabditis elegans Hypothetical...    29   5.5  
AL117195-30|CAB60772.3| 1456|Caenorhabditis elegans Hypothetical...    29   5.5  
U51998-6|ABS83845.1|  825|Caenorhabditis elegans Hypothetical pr...    28   9.5  

>Z81593-10|CAI94504.1|  349|Caenorhabditis elegans Hypothetical
           protein T20B3.15 protein.
          Length = 349

 Score = 30.7 bits (66), Expect = 1.4
 Identities = 23/73 (31%), Positives = 34/73 (46%), Gaps = 1/73 (1%)
 Frame = -1

Query: 270 VFDPSCYFSTPPFDTVLYDNIRTVLKDNKTALLSASIQASLPSSEIYRQLVDPRHVFS-D 94
           ++D +C F+   +  + YD I T  +      LS S  AS+ S    R L+    VFS  
Sbjct: 235 IYDETCVFNYDNYCYIPYDQINTSKQGQSICELSGSNLASIRSGNENRFLMSTVSVFSIF 294

Query: 93  SFGVYVKS*SLIL 55
           + G +  S  LIL
Sbjct: 295 AIGGFAFSDDLIL 307


>AL117195-31|CAN99709.1| 1459|Caenorhabditis elegans Hypothetical
            protein Y57A10A.18b protein.
          Length = 1459

 Score = 28.7 bits (61), Expect = 5.5
 Identities = 11/27 (40%), Positives = 19/27 (70%)
 Frame = -3

Query: 571  KLPLSSEAPSAYLTPSSLGMXKGVSPP 491
            ++P+++EAP+A   PS   + +G SPP
Sbjct: 1201 QVPVAAEAPAAAAAPSRARVPRGPSPP 1227


>AL117195-30|CAB60772.3| 1456|Caenorhabditis elegans Hypothetical
            protein Y57A10A.18a protein.
          Length = 1456

 Score = 28.7 bits (61), Expect = 5.5
 Identities = 11/27 (40%), Positives = 19/27 (70%)
 Frame = -3

Query: 571  KLPLSSEAPSAYLTPSSLGMXKGVSPP 491
            ++P+++EAP+A   PS   + +G SPP
Sbjct: 1201 QVPVAAEAPAAAAAPSRARVPRGPSPP 1227


>U51998-6|ABS83845.1|  825|Caenorhabditis elegans Hypothetical
           protein C12D12.1c protein.
          Length = 825

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 19/71 (26%), Positives = 29/71 (40%)
 Frame = -3

Query: 703 PFPGISXTSTXSSNPRFHTPTTPDLTSISINPLTPX*KEFAPGLKLPLSSEAPSAYLTPS 524
           P P  + T+T  +NP   TPTT   TS   N ++P        +     + AP    +P+
Sbjct: 490 PTPVPTTTNTPPANPTTATPTTVG-TSKQTNTISPHLSTITGSIVTSTPTMAPQTSASPT 548

Query: 523 SLGMXKGVSPP 491
           +       S P
Sbjct: 549 TTPTHTTASQP 559


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,935,759
Number of Sequences: 27780
Number of extensions: 316509
Number of successful extensions: 955
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 914
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 955
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2087513582
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)