Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP02_T7_P16
(836 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF016835-1|AAC26144.1| 416|Drosophila melanogaster ribosomal pr... 305 5e-83
AE014297-1265|AAF54609.1| 403|Drosophila melanogaster CG4863-PE... 305 5e-83
AE014297-1264|AAN13496.1| 403|Drosophila melanogaster CG4863-PB... 305 5e-83
AE014297-1262|AAF54610.2| 416|Drosophila melanogaster CG4863-PA... 305 5e-83
BT011339-1|AAR96131.1| 465|Drosophila melanogaster RH62603p pro... 298 5e-81
>AF016835-1|AAC26144.1| 416|Drosophila melanogaster ribosomal
protein L3 protein.
Length = 416
Score = 305 bits (749), Expect = 5e-83
Identities = 142/173 (82%), Positives = 153/173 (88%)
Frame = -2
Query: 592 HKEATPVRHTKXXRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIHKKE 413
H + P + K RKVACIGAWHPSRVS TVARAGQKGYHHRTE+NKKIYRIG GIH K+
Sbjct: 236 HTKKLPRKTHKGLRKVACIGAWHPSRVSTTVARAGQKGYHHRTEINKKIYRIGAGIHTKD 295
Query: 412 GKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKSLRVHT 233
GKVIKNNASTEYDL++KSITPMGGFPHYGEVNNDFVMIKGCC+G KKRIITLRKSL HT
Sbjct: 296 GKVIKNNASTEYDLTDKSITPMGGFPHYGEVNNDFVMIKGCCIGSKKRIITLRKSLLKHT 355
Query: 232 KRAALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLKKDRIREEAAATTTPA 74
KR+ALE+I LKFIDTSSK GHGRFQTPADK AFMG LKKDR++EEAAATT A
Sbjct: 356 KRSALEQIKLKFIDTSSKMGHGRFQTPADKLAFMGPLKKDRLKEEAAATTAAA 408
Score = 79.0 bits (186), Expect = 7e-15
Identities = 35/54 (64%), Positives = 41/54 (75%)
Frame = -3
Query: 738 GTIEDKVKWARGHXEKPIPVDSVFAQDEMIDCIGVTQGQRIQRCHFSXHTKKLP 577
G+IEDKVKWAR H EKPI V +VF QDEMIDC+GVT+G+ + HTKKLP
Sbjct: 188 GSIEDKVKWAREHLEKPIQVSNVFGQDEMIDCVGVTKGKGFKGVTSRWHTKKLP 241
Score = 57.2 bits (132), Expect = 3e-08
Identities = 32/88 (36%), Positives = 46/88 (52%)
Frame = -1
Query: 821 LXVIAHTQMKXLXXGQKKAHIMEIQXXGVPSRTK*NGPEDXWRNLSLSILCLPKMK*LTA 642
+ VIAH+Q++ + QKKAH+MEIQ G K + + + +
Sbjct: 160 IRVIAHSQIRLIKQRQKKAHVMEIQLNGGSIEDKVKWAREHLEKPIQVSNVFGQDEMIDC 219
Query: 641 LVSPKGKGYKGVTSRXTQRSYPRKTHQG 558
+ KGKG+KGVTSR + PRKTH+G
Sbjct: 220 VGVTKGKGFKGVTSRWHTKKLPRKTHKG 247
>AE014297-1265|AAF54609.1| 403|Drosophila melanogaster CG4863-PE,
isoform E protein.
Length = 403
Score = 305 bits (749), Expect = 5e-83
Identities = 142/173 (82%), Positives = 153/173 (88%)
Frame = -2
Query: 592 HKEATPVRHTKXXRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIHKKE 413
H + P + K RKVACIGAWHPSRVS TVARAGQKGYHHRTE+NKKIYRIG GIH K+
Sbjct: 223 HTKKLPRKTHKGLRKVACIGAWHPSRVSTTVARAGQKGYHHRTEINKKIYRIGAGIHTKD 282
Query: 412 GKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKSLRVHT 233
GKVIKNNASTEYDL++KSITPMGGFPHYGEVNNDFVMIKGCC+G KKRIITLRKSL HT
Sbjct: 283 GKVIKNNASTEYDLTDKSITPMGGFPHYGEVNNDFVMIKGCCIGSKKRIITLRKSLLKHT 342
Query: 232 KRAALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLKKDRIREEAAATTTPA 74
KR+ALE+I LKFIDTSSK GHGRFQTPADK AFMG LKKDR++EEAAATT A
Sbjct: 343 KRSALEQIKLKFIDTSSKMGHGRFQTPADKLAFMGPLKKDRLKEEAAATTAAA 395
Score = 79.0 bits (186), Expect = 7e-15
Identities = 35/54 (64%), Positives = 41/54 (75%)
Frame = -3
Query: 738 GTIEDKVKWARGHXEKPIPVDSVFAQDEMIDCIGVTQGQRIQRCHFSXHTKKLP 577
G+IEDKVKWAR H EKPI V +VF QDEMIDC+GVT+G+ + HTKKLP
Sbjct: 175 GSIEDKVKWAREHLEKPIQVSNVFGQDEMIDCVGVTKGKGFKGVTSRWHTKKLP 228
Score = 57.2 bits (132), Expect = 3e-08
Identities = 32/88 (36%), Positives = 46/88 (52%)
Frame = -1
Query: 821 LXVIAHTQMKXLXXGQKKAHIMEIQXXGVPSRTK*NGPEDXWRNLSLSILCLPKMK*LTA 642
+ VIAH+Q++ + QKKAH+MEIQ G K + + + +
Sbjct: 147 IRVIAHSQIRLIKQRQKKAHVMEIQLNGGSIEDKVKWAREHLEKPIQVSNVFGQDEMIDC 206
Query: 641 LVSPKGKGYKGVTSRXTQRSYPRKTHQG 558
+ KGKG+KGVTSR + PRKTH+G
Sbjct: 207 VGVTKGKGFKGVTSRWHTKKLPRKTHKG 234
>AE014297-1264|AAN13496.1| 403|Drosophila melanogaster CG4863-PB,
isoform B protein.
Length = 403
Score = 305 bits (749), Expect = 5e-83
Identities = 142/173 (82%), Positives = 153/173 (88%)
Frame = -2
Query: 592 HKEATPVRHTKXXRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIHKKE 413
H + P + K RKVACIGAWHPSRVS TVARAGQKGYHHRTE+NKKIYRIG GIH K+
Sbjct: 223 HTKKLPRKTHKGLRKVACIGAWHPSRVSTTVARAGQKGYHHRTEINKKIYRIGAGIHTKD 282
Query: 412 GKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKSLRVHT 233
GKVIKNNASTEYDL++KSITPMGGFPHYGEVNNDFVMIKGCC+G KKRIITLRKSL HT
Sbjct: 283 GKVIKNNASTEYDLTDKSITPMGGFPHYGEVNNDFVMIKGCCIGSKKRIITLRKSLLKHT 342
Query: 232 KRAALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLKKDRIREEAAATTTPA 74
KR+ALE+I LKFIDTSSK GHGRFQTPADK AFMG LKKDR++EEAAATT A
Sbjct: 343 KRSALEQIKLKFIDTSSKMGHGRFQTPADKLAFMGPLKKDRLKEEAAATTAAA 395
Score = 79.0 bits (186), Expect = 7e-15
Identities = 35/54 (64%), Positives = 41/54 (75%)
Frame = -3
Query: 738 GTIEDKVKWARGHXEKPIPVDSVFAQDEMIDCIGVTQGQRIQRCHFSXHTKKLP 577
G+IEDKVKWAR H EKPI V +VF QDEMIDC+GVT+G+ + HTKKLP
Sbjct: 175 GSIEDKVKWAREHLEKPIQVSNVFGQDEMIDCVGVTKGKGFKGVTSRWHTKKLP 228
Score = 57.2 bits (132), Expect = 3e-08
Identities = 32/88 (36%), Positives = 46/88 (52%)
Frame = -1
Query: 821 LXVIAHTQMKXLXXGQKKAHIMEIQXXGVPSRTK*NGPEDXWRNLSLSILCLPKMK*LTA 642
+ VIAH+Q++ + QKKAH+MEIQ G K + + + +
Sbjct: 147 IRVIAHSQIRLIKQRQKKAHVMEIQLNGGSIEDKVKWAREHLEKPIQVSNVFGQDEMIDC 206
Query: 641 LVSPKGKGYKGVTSRXTQRSYPRKTHQG 558
+ KGKG+KGVTSR + PRKTH+G
Sbjct: 207 VGVTKGKGFKGVTSRWHTKKLPRKTHKG 234
>AE014297-1262|AAF54610.2| 416|Drosophila melanogaster CG4863-PA,
isoform A protein.
Length = 416
Score = 305 bits (749), Expect = 5e-83
Identities = 142/173 (82%), Positives = 153/173 (88%)
Frame = -2
Query: 592 HKEATPVRHTKXXRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIHKKE 413
H + P + K RKVACIGAWHPSRVS TVARAGQKGYHHRTE+NKKIYRIG GIH K+
Sbjct: 236 HTKKLPRKTHKGLRKVACIGAWHPSRVSTTVARAGQKGYHHRTEINKKIYRIGAGIHTKD 295
Query: 412 GKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKSLRVHT 233
GKVIKNNASTEYDL++KSITPMGGFPHYGEVNNDFVMIKGCC+G KKRIITLRKSL HT
Sbjct: 296 GKVIKNNASTEYDLTDKSITPMGGFPHYGEVNNDFVMIKGCCIGSKKRIITLRKSLLKHT 355
Query: 232 KRAALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLKKDRIREEAAATTTPA 74
KR+ALE+I LKFIDTSSK GHGRFQTPADK AFMG LKKDR++EEAAATT A
Sbjct: 356 KRSALEQIKLKFIDTSSKMGHGRFQTPADKLAFMGPLKKDRLKEEAAATTAAA 408
Score = 79.0 bits (186), Expect = 7e-15
Identities = 35/54 (64%), Positives = 41/54 (75%)
Frame = -3
Query: 738 GTIEDKVKWARGHXEKPIPVDSVFAQDEMIDCIGVTQGQRIQRCHFSXHTKKLP 577
G+IEDKVKWAR H EKPI V +VF QDEMIDC+GVT+G+ + HTKKLP
Sbjct: 188 GSIEDKVKWAREHLEKPIQVSNVFGQDEMIDCVGVTKGKGFKGVTSRWHTKKLP 241
Score = 57.2 bits (132), Expect = 3e-08
Identities = 32/88 (36%), Positives = 46/88 (52%)
Frame = -1
Query: 821 LXVIAHTQMKXLXXGQKKAHIMEIQXXGVPSRTK*NGPEDXWRNLSLSILCLPKMK*LTA 642
+ VIAH+Q++ + QKKAH+MEIQ G K + + + +
Sbjct: 160 IRVIAHSQIRLIKQRQKKAHVMEIQLNGGSIEDKVKWAREHLEKPIQVSNVFGQDEMIDC 219
Query: 641 LVSPKGKGYKGVTSRXTQRSYPRKTHQG 558
+ KGKG+KGVTSR + PRKTH+G
Sbjct: 220 VGVTKGKGFKGVTSRWHTKKLPRKTHKG 247
>BT011339-1|AAR96131.1| 465|Drosophila melanogaster RH62603p
protein.
Length = 465
Score = 298 bits (732), Expect = 5e-81
Identities = 138/167 (82%), Positives = 149/167 (89%)
Frame = -2
Query: 592 HKEATPVRHTKXXRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIHKKE 413
H + P + K RKVACIGAWHPSRVS TVARAGQKGYHHRTE+NKKIYRIG GIH K+
Sbjct: 247 HTKKLPRKTHKGLRKVACIGAWHPSRVSTTVARAGQKGYHHRTEINKKIYRIGAGIHTKD 306
Query: 412 GKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKSLRVHT 233
GKVIKNNASTEYDL++KSITPMGGFPHYGEVNNDFVMIKGCC+G KKRIITLRKSL HT
Sbjct: 307 GKVIKNNASTEYDLTDKSITPMGGFPHYGEVNNDFVMIKGCCIGSKKRIITLRKSLLKHT 366
Query: 232 KRAALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLKKDRIREEAA 92
KR+ALE+I LKFIDTSSK GHGRFQTPADK AFMG LKKDR++EEAA
Sbjct: 367 KRSALEQIKLKFIDTSSKMGHGRFQTPADKLAFMGPLKKDRLKEEAA 413
Score = 79.0 bits (186), Expect = 7e-15
Identities = 35/54 (64%), Positives = 41/54 (75%)
Frame = -3
Query: 738 GTIEDKVKWARGHXEKPIPVDSVFAQDEMIDCIGVTQGQRIQRCHFSXHTKKLP 577
G+IEDKVKWAR H EKPI V +VF QDEMIDC+GVT+G+ + HTKKLP
Sbjct: 199 GSIEDKVKWAREHLEKPIQVSNVFGQDEMIDCVGVTKGKGFKGVTSRWHTKKLP 252
Score = 57.2 bits (132), Expect = 3e-08
Identities = 32/88 (36%), Positives = 46/88 (52%)
Frame = -1
Query: 821 LXVIAHTQMKXLXXGQKKAHIMEIQXXGVPSRTK*NGPEDXWRNLSLSILCLPKMK*LTA 642
+ VIAH+Q++ + QKKAH+MEIQ G K + + + +
Sbjct: 171 IRVIAHSQIRLIKQRQKKAHVMEIQLNGGSIEDKVKWAREHLEKPIQVSNVFGQDEMIDC 230
Query: 641 LVSPKGKGYKGVTSRXTQRSYPRKTHQG 558
+ KGKG+KGVTSR + PRKTH+G
Sbjct: 231 VGVTKGKGFKGVTSRWHTKKLPRKTHKG 258
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 38,488,732
Number of Sequences: 53049
Number of extensions: 836144
Number of successful extensions: 2173
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 2085
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2168
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3983256888
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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