Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP02_T7_P10
(829 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC111727-1|AAI11728.1| 1077|Homo sapiens transcription elongatio... 34 0.72
AF017789-1|AAB80727.1| 1098|Homo sapiens putative transcription ... 34 0.72
AB209910-1|BAD93147.1| 1081|Homo sapiens transcription elongatio... 34 0.72
U91543-1|AAC39923.1| 2000|Homo sapiens zinc-finger helicase prot... 33 1.3
BC110648-1|AAI10649.1| 661|Homo sapiens CHD3 protein protein. 33 1.3
AF006515-1|AAB87383.1| 1944|Homo sapiens CHD3 protein. 33 1.3
BC117331-1|AAI17332.1| 346|Homo sapiens selenoprotein V protein. 32 2.9
AY324825-1|AAP85542.1| 346|Homo sapiens selenoprotein V protein. 32 2.9
M94131-1|AAA59163.1| 1270|Homo sapiens mucin protein. 31 5.1
M74027-1|AAA59875.1| 573|Homo sapiens mucin protein. 31 5.1
L21998-1|AAB95295.1| 5179|Homo sapiens mucin protein. 31 5.1
AL137724-1|CAB70894.1| 439|Homo sapiens hypothetical protein pr... 31 6.7
AC078834-1|AAS01989.1| 439|Homo sapiens unknown protein. 31 6.7
CR456522-1|CAG30408.1| 931|Homo sapiens MKL1 protein. 30 8.9
BC115039-1|AAI15040.1| 798|Homo sapiens MKL1 protein protein. 30 8.9
>BC111727-1|AAI11728.1| 1077|Homo sapiens transcription elongation
regulator 1 protein.
Length = 1077
Score = 33.9 bits (74), Expect = 0.72
Identities = 23/64 (35%), Positives = 31/64 (48%), Gaps = 5/64 (7%)
Frame = -2
Query: 705 PSPAISXTSTRSSNPXFHTPTTPDLTSISINPLTPX*KEFAPG-----VKPPLSSEAPSA 541
P+PA+S TST SS P T TT TS++ TP ++ P P +S P+
Sbjct: 266 PAPAVS-TSTSSSTPSSTTSTTTTATSVAQTVSTPTTQDQTPSSAVSVATPTVSVSTPAP 324
Query: 540 YLTP 529
TP
Sbjct: 325 TATP 328
>AF017789-1|AAB80727.1| 1098|Homo sapiens putative transcription
factor CA150 protein.
Length = 1098
Score = 33.9 bits (74), Expect = 0.72
Identities = 23/64 (35%), Positives = 31/64 (48%), Gaps = 5/64 (7%)
Frame = -2
Query: 705 PSPAISXTSTRSSNPXFHTPTTPDLTSISINPLTPX*KEFAPG-----VKPPLSSEAPSA 541
P+PA+S TST SS P T TT TS++ TP ++ P P +S P+
Sbjct: 266 PAPAVS-TSTSSSTPSSTTSTTTTATSVAQTVSTPTTQDQTPSSAVSVATPTVSVSTPAR 324
Query: 540 YLTP 529
TP
Sbjct: 325 TATP 328
>AB209910-1|BAD93147.1| 1081|Homo sapiens transcription elongation
regulator 1 variant protein.
Length = 1081
Score = 33.9 bits (74), Expect = 0.72
Identities = 23/64 (35%), Positives = 31/64 (48%), Gaps = 5/64 (7%)
Frame = -2
Query: 705 PSPAISXTSTRSSNPXFHTPTTPDLTSISINPLTPX*KEFAPG-----VKPPLSSEAPSA 541
P+PA+S TST SS P T TT TS++ TP ++ P P +S P+
Sbjct: 270 PAPAVS-TSTSSSTPSSTTSTTTTATSVAQTVSTPTTQDQTPSSAVSVATPTVSVSTPAP 328
Query: 540 YLTP 529
TP
Sbjct: 329 TATP 332
>U91543-1|AAC39923.1| 2000|Homo sapiens zinc-finger helicase protein.
Length = 2000
Score = 33.1 bits (72), Expect = 1.3
Identities = 20/56 (35%), Positives = 30/56 (53%), Gaps = 5/56 (8%)
Frame = -2
Query: 705 PSP-AISXTSTRSSNPXFHTPTTPDLTS----ISINPLTPX*KEFAPGVKPPLSSE 553
P P A S S+R+S+P +PTTP+ ++ + P TP E G++ PL E
Sbjct: 1519 PDPSADSKRSSRASSPTKTSPTTPEASATNSPCTSKPATPAPSEKGEGIRTPLEKE 1574
>BC110648-1|AAI10649.1| 661|Homo sapiens CHD3 protein protein.
Length = 661
Score = 33.1 bits (72), Expect = 1.3
Identities = 20/56 (35%), Positives = 30/56 (53%), Gaps = 5/56 (8%)
Frame = -2
Query: 705 PSP-AISXTSTRSSNPXFHTPTTPDLTS----ISINPLTPX*KEFAPGVKPPLSSE 553
P P A S S+R+S+P +PTTP+ ++ + P TP E G++ PL E
Sbjct: 180 PDPSADSKRSSRASSPTKTSPTTPEASATNSPCTSKPATPAPSEKGEGIRTPLEKE 235
>AF006515-1|AAB87383.1| 1944|Homo sapiens CHD3 protein.
Length = 1944
Score = 33.1 bits (72), Expect = 1.3
Identities = 20/56 (35%), Positives = 30/56 (53%), Gaps = 5/56 (8%)
Frame = -2
Query: 705 PSP-AISXTSTRSSNPXFHTPTTPDLTS----ISINPLTPX*KEFAPGVKPPLSSE 553
P P A S S+R+S+P +PTTP+ ++ + P TP E G++ PL E
Sbjct: 1519 PDPSADSKRSSRASSPTKTSPTTPEASATNSPCTSKPATPAPSEKGEGIRTPLEKE 1574
>BC117331-1|AAI17332.1| 346|Homo sapiens selenoprotein V protein.
Length = 346
Score = 31.9 bits (69), Expect = 2.9
Identities = 27/80 (33%), Positives = 35/80 (43%), Gaps = 9/80 (11%)
Frame = -2
Query: 705 PSPAISXTSTRSSNPXFHTPT-----TPDLTSISINPLTPX*KEFAPGVKP----PLSSE 553
PS A + TS R+S P TPT TP T I LTP G P P ++
Sbjct: 10 PSSARTSTSVRASTPT-RTPTPLRTPTPVRTRTPIRTLTPVLTPSPAGTSPLVLTPAPAQ 68
Query: 552 APSAYLTPSSLGMXKGVSPP 493
P+ TP+ + + V PP
Sbjct: 69 IPTLVPTPALARIPRLVPPP 88
>AY324825-1|AAP85542.1| 346|Homo sapiens selenoprotein V protein.
Length = 346
Score = 31.9 bits (69), Expect = 2.9
Identities = 27/80 (33%), Positives = 35/80 (43%), Gaps = 9/80 (11%)
Frame = -2
Query: 705 PSPAISXTSTRSSNPXFHTPT-----TPDLTSISINPLTPX*KEFAPGVKP----PLSSE 553
PS A + TS R+S P TPT TP T I LTP G P P ++
Sbjct: 10 PSSARTSTSVRASTPT-RTPTPLRTPTPVRTRTPIRTLTPVLTPSPAGTSPLVLTPAPAQ 68
Query: 552 APSAYLTPSSLGMXKGVSPP 493
P+ TP+ + + V PP
Sbjct: 69 IPTLVPTPALARIPRLVPPP 88
>M94131-1|AAA59163.1| 1270|Homo sapiens mucin protein.
Length = 1270
Score = 31.1 bits (67), Expect = 5.1
Identities = 21/76 (27%), Positives = 33/76 (43%), Gaps = 5/76 (6%)
Frame = -2
Query: 705 PSPAISXTST----RSSNPXFHTPTTPDLTSISINPLT-PX*KEFAPGVKPPLSSEAPSA 541
PSP + T+T + +P TP TP ++ ++ P T P PP ++ +P
Sbjct: 898 PSPPTTTTTTPPPTTTPSPPTTTPITPPTSTTTLPPTTTPSPPPTTTTTPPPTTTPSPPT 957
Query: 540 YLTPSSLGMXKGVSPP 493
TPS + PP
Sbjct: 958 TTTPSPPTITTTTPPP 973
>M74027-1|AAA59875.1| 573|Homo sapiens mucin protein.
Length = 573
Score = 31.1 bits (67), Expect = 5.1
Identities = 21/76 (27%), Positives = 33/76 (43%), Gaps = 5/76 (6%)
Frame = -2
Query: 705 PSPAISXTST----RSSNPXFHTPTTPDLTSISINPLT-PX*KEFAPGVKPPLSSEAPSA 541
PSP + T+T + +P TP TP ++ ++ P T P PP ++ +P
Sbjct: 181 PSPPTTTTTTPPPTTTPSPPTTTPITPPTSTTTLPPTTTPSPPPTTTTTPPPTTTPSPPT 240
Query: 540 YLTPSSLGMXKGVSPP 493
TPS + PP
Sbjct: 241 TTTPSPPTITTTTPPP 256
>L21998-1|AAB95295.1| 5179|Homo sapiens mucin protein.
Length = 5179
Score = 31.1 bits (67), Expect = 5.1
Identities = 21/76 (27%), Positives = 33/76 (43%), Gaps = 5/76 (6%)
Frame = -2
Query: 705 PSPAISXTST----RSSNPXFHTPTTPDLTSISINPLT-PX*KEFAPGVKPPLSSEAPSA 541
PSP + T+T + +P TP TP ++ ++ P T P PP ++ +P
Sbjct: 1523 PSPPTTTTTTPPPTTTPSPPTTTPITPPTSTTTLPPTTTPSPPPTTTTTPPPTTTPSPPT 1582
Query: 540 YLTPSSLGMXKGVSPP 493
TPS + PP
Sbjct: 1583 TTTPSPPTITTTTPPP 1598
>AL137724-1|CAB70894.1| 439|Homo sapiens hypothetical protein
protein.
Length = 439
Score = 30.7 bits (66), Expect = 6.7
Identities = 14/27 (51%), Positives = 14/27 (51%)
Frame = -3
Query: 704 PPLRFRXHQPDHQIPDSIHPPPQT*HP 624
PP HQP HQ P PPPQ HP
Sbjct: 46 PPQHQPPHQPPHQPPPQHQPPPQ--HP 70
>AC078834-1|AAS01989.1| 439|Homo sapiens unknown protein.
Length = 439
Score = 30.7 bits (66), Expect = 6.7
Identities = 14/27 (51%), Positives = 14/27 (51%)
Frame = -3
Query: 704 PPLRFRXHQPDHQIPDSIHPPPQT*HP 624
PP HQP HQ P PPPQ HP
Sbjct: 46 PPQHQPPHQPPHQPPPQHQPPPQ--HP 70
>CR456522-1|CAG30408.1| 931|Homo sapiens MKL1 protein.
Length = 931
Score = 30.3 bits (65), Expect = 8.9
Identities = 18/59 (30%), Positives = 25/59 (42%), Gaps = 1/59 (1%)
Frame = -2
Query: 666 NPXFHTPTTPDLTSISINPLTPX*KEFAPGVKP-PLSSEAPSAYLTPSSLGMXKGVSPP 493
NP P T + ++ P P ++P P AP L P G+ KGV+PP
Sbjct: 598 NPSLAAPATNHIDPCAVAPGPPSVVVKQEALQPEPEPVPAPQLLLGPQGPGLIKGVAPP 656
>BC115039-1|AAI15040.1| 798|Homo sapiens MKL1 protein protein.
Length = 798
Score = 30.3 bits (65), Expect = 8.9
Identities = 18/59 (30%), Positives = 25/59 (42%), Gaps = 1/59 (1%)
Frame = -2
Query: 666 NPXFHTPTTPDLTSISINPLTPX*KEFAPGVKP-PLSSEAPSAYLTPSSLGMXKGVSPP 493
NP P T + ++ P P ++P P AP L P G+ KGV+PP
Sbjct: 598 NPSLAAPATNHIDPCAVAPGPPSVVVKQEALQPEPEPVPAPQLLLGPQGPGLIKGVAPP 656
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 104,693,569
Number of Sequences: 237096
Number of extensions: 2160137
Number of successful extensions: 5192
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 4815
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5163
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10370898348
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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