Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP02_T7_P10
         (829 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U42403-1|AAB02355.1| 1180|Drosophila melanogaster stripe a prote...    33   0.48 
AE014296-3425|AAF51645.2|  926|Drosophila melanogaster CG3680-PA...    30   4.4  
L07262-1|AAA03084.1|  217|Drosophila melanogaster protein ( Dros...    29   7.8  

>U42403-1|AAB02355.1| 1180|Drosophila melanogaster stripe a protein
           protein.
          Length = 1180

 Score = 33.1 bits (72), Expect = 0.48
 Identities = 19/52 (36%), Positives = 31/52 (59%)
 Frame = -2

Query: 696 AISXTSTRSSNPXFHTPTTPDLTSISINPLTPX*KEFAPGVKPPLSSEAPSA 541
           A + +++ +S    +TPTTP L  +S NPL     +FAP   PP++  +P+A
Sbjct: 50  AATNSTSANSQDSLNTPTTP-LLGLSRNPL-----QFAPPPAPPIAVPSPAA 95


>AE014296-3425|AAF51645.2|  926|Drosophila melanogaster CG3680-PA
           protein.
          Length = 926

 Score = 29.9 bits (64), Expect = 4.4
 Identities = 22/62 (35%), Positives = 30/62 (48%)
 Frame = -2

Query: 681 STRSSNPXFHTPTTPDLTSISINPLTPX*KEFAPGVKPPLSSEAPSAYLTPSSLGMXKGV 502
           ST+++ P    PTTP  T  SI+P T   KE AP  +    +   +   TP   G  +G 
Sbjct: 405 STKAACP---APTTPKTTVKSISPTTTTKKEVAPKKRSATPTARSTKAGTPVG-GTERGP 460

Query: 501 SP 496
           SP
Sbjct: 461 SP 462


>L07262-1|AAA03084.1|  217|Drosophila melanogaster protein (
           Drosophila melanogastermRNA sequence, complete cds. ).
          Length = 217

 Score = 29.1 bits (62), Expect = 7.8
 Identities = 21/66 (31%), Positives = 35/66 (53%), Gaps = 1/66 (1%)
 Frame = -2

Query: 699 PAISXTSTRSSNPXFHTPTTPDLT-SISINPLTPX*KEFAPGVKPPLSSEAPSAYLTPSS 523
           P  +  ST +++P  HTP +P  T  I+ +P  P   E    +KPP     P  + +PS+
Sbjct: 78  PITAPASTTTASP-IHTPKSPPPTPPINKSPSLPSNIE----LKPPAKPARP--FTSPST 130

Query: 522 LGMXKG 505
           +G+ +G
Sbjct: 131 IGIVQG 136


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,179,819
Number of Sequences: 53049
Number of extensions: 677240
Number of successful extensions: 2030
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1883
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2022
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3921660132
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)