Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP02_T7_P06
(826 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
11_06_0739 + 26814463-26814809,26814891-26815217,26815458-26817636 32 0.48
05_05_0348 + 24271764-24271898,24273055-24273144,24273205-242733... 31 1.5
08_02_0275 - 15208561-15209142 30 1.9
08_01_0870 - 8491020-8491109,8491523-8491660,8492442-8492568,849... 30 1.9
05_02_0115 - 6758540-6758771,6759417-6759524,6759670-6759840,675... 30 1.9
10_01_0165 - 1869312-1869449,1870486-1872326,1872356-1872719 30 2.6
07_03_1392 - 26238885-26239007,26239137-26239235,26239636-262397... 30 2.6
04_01_0301 + 4016588-4016627,4016715-4018837 30 2.6
03_06_0341 - 33261210-33261327,33261411-33262057,33262950-332630... 30 2.6
03_05_0171 + 21486473-21486775,21486835-21486912,21487223-214874... 30 2.6
03_03_0191 + 15302384-15302422,15302780-15303246,15303356-153035... 30 2.6
07_03_0965 - 22996575-22999112,22999202-22999636,22999717-229998... 29 4.5
04_03_0770 + 19420249-19420359,19421691-19421763,19421887-194219... 29 4.5
07_03_1013 + 23299569-23300630 28 7.8
02_05_0405 + 28708077-28708391,28708478-28708573,28709030-287094... 28 7.8
01_03_0051 - 11985456-11985803 28 7.8
>11_06_0739 + 26814463-26814809,26814891-26815217,26815458-26817636
Length = 950
Score = 32.3 bits (70), Expect = 0.48
Identities = 18/46 (39%), Positives = 27/46 (58%), Gaps = 6/46 (13%)
Frame = -1
Query: 121 NKLKKRGGLLSIFSSNKNNMS------TDGKEDYSDLPPNQKKKKK 2
N +KK LL +FSSNK+N+ TDG++ + L + KK +K
Sbjct: 611 NNVKKISKLLKLFSSNKSNLQTLAGFITDGRKGFLQLIGHMKKLRK 656
>05_05_0348 +
24271764-24271898,24273055-24273144,24273205-24273303,
24273725-24273826,24273912-24274088,24274193-24274398,
24274491-24274575,24274641-24274798,24274873-24274948,
24275117-24275245,24275313-24275457,24275561-24275691,
24276183-24276335,24276447-24276636,24277006-24277139,
24277248-24277406,24277659-24277964,24278040-24278216,
24278446-24278529,24278592-24278822,24278913-24279002,
24279090-24279211,24279293-24279448,24279477-24279635,
24279705-24279765,24280004-24280138,24280384-24280471,
24280548-24280620,24280883-24280994,24281691-24281711
Length = 1327
Score = 30.7 bits (66), Expect = 1.5
Identities = 24/70 (34%), Positives = 38/70 (54%), Gaps = 1/70 (1%)
Frame = -1
Query: 556 KQKANMKLRSQACEDAK-QEYLEQLRKTNEAQRQHYEQRLPHVFKQLQDLDEKRIKNIKN 380
+Q + MK +SQ D EYLE + TN+ Y +++ KQL+ L+EKR +++
Sbjct: 230 EQISLMKPKSQGPHDEGFLEYLEDIIGTNQ-----YVEKIEEASKQLEMLNEKRTASVQ- 283
Query: 379 FMLSSVDVER 350
ML + ER
Sbjct: 284 -MLKLAEKER 292
>08_02_0275 - 15208561-15209142
Length = 193
Score = 30.3 bits (65), Expect = 1.9
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = -3
Query: 575 KSGRVGEAKSEHETQESGVRRCETG 501
+ GR+GEA+S E + RRCE G
Sbjct: 138 RGGRLGEARSSLEESAAAARRCEDG 162
>08_01_0870 -
8491020-8491109,8491523-8491660,8492442-8492568,
8492667-8492801,8493262-8493731
Length = 319
Score = 30.3 bits (65), Expect = 1.9
Identities = 37/153 (24%), Positives = 72/153 (47%), Gaps = 12/153 (7%)
Frame = -1
Query: 607 TFQKADADLNLSRAELEKQKANMKLRSQACEDAKQE---YLEQLRK-----TNEAQRQHY 452
+F A ADL+L RAE+E+++ + S+A D ++ L +L+K N+ ++Q
Sbjct: 157 SFVVASADLSLRRAEVEEKRDKVHKESKALLDYTRKAITKLTELKKMLEKFKNDVEKQQA 216
Query: 451 EQRLPHVFK-QLQDLDEKR-IKNIKNF--MLSSVDVERKVFPIIIQCFDGMELAANSINE 284
EQ K + D E++ I + N+ ML+ V ++ ++ ME+A + +
Sbjct: 217 EQMTDWQTKLVMMDSKERQYILQVSNYKAMLNRVGYTPEINHGVL-----MEMAEHKKDL 271
Query: 283 KEDTKLVIDRYKSGFVPPEDFQFELASGADTTD 185
+ TK + D +S P + + D ++
Sbjct: 272 ERKTKPIADTLRSYQDLPPLLSYHVIDNQDASE 304
>05_02_0115 - 6758540-6758771,6759417-6759524,6759670-6759840,
6759967-6760077,6760562-6760663,6761139-6761366,
6761568-6761696,6761753-6761869,6761955-6762301,
6762377-6762931,6763104-6763182,6763429-6763595,
6763857-6764075,6764956-6765139,6765175-6765371,
6765717-6766035,6766379-6766538,6767642-6767794,
6767911-6768013
Length = 1226
Score = 30.3 bits (65), Expect = 1.9
Identities = 19/58 (32%), Positives = 28/58 (48%)
Frame = -1
Query: 205 SGADTTDSASTHHQPHNHLTASRGTVSGNKLKKRGGLLSIFSSNKNNMSTDGKEDYSD 32
S ++ D+ S+ N T SRG+ + K+RG SIFS + + D E Y D
Sbjct: 858 SDSEADDNDSSIQIEKNRNTVSRGSQNSEAPKRRG--RSIFSEEQEKLMRDLYEKYKD 913
>10_01_0165 - 1869312-1869449,1870486-1872326,1872356-1872719
Length = 780
Score = 29.9 bits (64), Expect = 2.6
Identities = 21/67 (31%), Positives = 34/67 (50%)
Frame = -1
Query: 499 YLEQLRKTNEAQRQHYEQRLPHVFKQLQDLDEKRIKNIKNFMLSSVDVERKVFPIIIQCF 320
Y ++ + E QR+ E+ LP + +QD +EKR K K + + +D +KV I F
Sbjct: 23 YQYKVMEGMEQQRKALERMLPLILSVIQDTEEKRSK--KPELSAWLDELKKVSYEAIDVF 80
Query: 319 DGMELAA 299
D + A
Sbjct: 81 DEFKYEA 87
>07_03_1392 -
26238885-26239007,26239137-26239235,26239636-26239720,
26239825-26240028,26240360-26240682,26241904-26242575
Length = 501
Score = 29.9 bits (64), Expect = 2.6
Identities = 14/48 (29%), Positives = 26/48 (54%)
Frame = -1
Query: 592 DADLNLSRAELEKQKANMKLRSQACEDAKQEYLEQLRKTNEAQRQHYE 449
D + + ++ ++ ANMK+ + ED Q EQ ++ E +R+H E
Sbjct: 454 DVNKDATKVFKARRLANMKMADEGHEDKVQARKEQKKRAQERKRKHDE 501
>04_01_0301 + 4016588-4016627,4016715-4018837
Length = 720
Score = 29.9 bits (64), Expect = 2.6
Identities = 21/89 (23%), Positives = 43/89 (48%), Gaps = 3/89 (3%)
Frame = -1
Query: 601 QKADADLNLSRAELEKQKANMKLRSQACEDAKQEYLEQLRKTNE---AQRQHYEQRLPHV 431
+ +A L + ++EKQ K +Q K+E L+ NE + + E++ H+
Sbjct: 35 ENKNAQLLDEKGKVEKQLEETKQEAQVISRQKEEVESSLKGQNEMLGLKVLNVEEKYNHM 94
Query: 430 FKQLQDLDEKRIKNIKNFMLSSVDVERKV 344
++LQ +K + M+ S D++R++
Sbjct: 95 VEKLQMELCALVKEKEKMMMESEDLKRRL 123
>03_06_0341 -
33261210-33261327,33261411-33262057,33262950-33263061,
33263313-33264097,33264797-33264867,33266323-33266635
Length = 681
Score = 29.9 bits (64), Expect = 2.6
Identities = 13/53 (24%), Positives = 32/53 (60%)
Frame = -1
Query: 580 NLSRAELEKQKANMKLRSQACEDAKQEYLEQLRKTNEAQRQHYEQRLPHVFKQ 422
+L+R +L++ + + L+ Q + +Q+ ++Q ++ + Q QH +Q+ F+Q
Sbjct: 497 SLTRQQLQQLRHHQLLQQQQQQFQQQQQVQQQQQQQQQQFQHQQQQQQQQFQQ 549
>03_05_0171 +
21486473-21486775,21486835-21486912,21487223-21487407,
21487507-21487897
Length = 318
Score = 29.9 bits (64), Expect = 2.6
Identities = 20/66 (30%), Positives = 28/66 (42%), Gaps = 2/66 (3%)
Frame = -3
Query: 596 GRR*PQSKS--GRVGEAKSEHETQESGVRRCETGIPRTASQNERSPEATLRAEITARVQT 423
G R P+ ++ A S + Q+ G E + A + ERS +R EI
Sbjct: 53 GARPPRERAVAAAAAAANSPRQQQQLGEHEHEEAVAAAAMEPERSSPHEVREEIARCFDL 112
Query: 422 VARLGR 405
V RLGR
Sbjct: 113 VRRLGR 118
>03_03_0191 +
15302384-15302422,15302780-15303246,15303356-15303563,
15303723-15303794,15304295-15304430,15304619-15304890,
15305197-15305345,15305818-15305947,15306244-15306258
Length = 495
Score = 29.9 bits (64), Expect = 2.6
Identities = 20/64 (31%), Positives = 35/64 (54%), Gaps = 4/64 (6%)
Frame = -1
Query: 319 DGMELAANS--INEKEDTKLVIDRYKS--GFVPPEDFQFELASGADTTDSASTHHQPHNH 152
D MEL ++ +E+ ++ +RY S PED +F +ASG+ + S + +Q NH
Sbjct: 243 DAMELLSSDQICTGQENLDMIGNRYSSENAMEQPEDQKFSIASGSQLSSSQNLLNQ-KNH 301
Query: 151 LTAS 140
L ++
Sbjct: 302 LDST 305
>07_03_0965 - 22996575-22999112,22999202-22999636,22999717-22999801,
22999888-22999957,23000050-23000293,23000396-23000482,
23000655-23000706,23000830-23001226,23001324-23001648,
23001748-23001914,23002007-23002547
Length = 1646
Score = 29.1 bits (62), Expect = 4.5
Identities = 20/65 (30%), Positives = 25/65 (38%)
Frame = -1
Query: 208 ASGADTTDSASTHHQPHNHLTASRGTVSGNKLKKRGGLLSIFSSNKNNMSTDGKEDYSDL 29
A G +D + H PH ASRG L + F S S G D+S L
Sbjct: 1037 AGGGGQSDKKLSDHHPHQLPPASRGQGVRIDLASSPSFVVPFGSVGAPGSAPGGLDFSSL 1096
Query: 28 PPNQK 14
PN +
Sbjct: 1097 GPNHQ 1101
>04_03_0770 +
19420249-19420359,19421691-19421763,19421887-19421964,
19422223-19422284,19422404-19422472,19422672-19422700,
19422784-19422991,19423071-19423301,19424079-19424132,
19425344-19426292,19426853-19426863
Length = 624
Score = 29.1 bits (62), Expect = 4.5
Identities = 14/48 (29%), Positives = 24/48 (50%)
Frame = -1
Query: 592 DADLNLSRAELEKQKANMKLRSQACEDAKQEYLEQLRKTNEAQRQHYE 449
D D SR+ ++ ++N + ++ KQEY EQ++ A R E
Sbjct: 276 DKDFPASRSSMDLDQSNQACSPEPLKEHKQEYTEQIQADFAAPRVKLE 323
>07_03_1013 + 23299569-23300630
Length = 353
Score = 28.3 bits (60), Expect = 7.8
Identities = 25/78 (32%), Positives = 35/78 (44%), Gaps = 1/78 (1%)
Frame = -1
Query: 604 FQKADADLNLSRAELEKQKANMKLRSQACEDAKQEYLEQLRKTNEAQRQHYEQRLPHVFK 425
FQ D +L E Q+ + CE QE L Q R E + HY H K
Sbjct: 53 FQCQDTELQ-PPCPYEDQELRILQAPLQCEVDAQETLNQHRDEQEEKLHHYLDE-EHE-K 109
Query: 424 QLQD-LDEKRIKNIKNFM 374
+LQD LDE+ K + +++
Sbjct: 110 KLQDHLDEEPEKKLHHYL 127
>02_05_0405 +
28708077-28708391,28708478-28708573,28709030-28709450,
28710051-28710141,28710483-28710819,28710905-28711053,
28711782-28712295
Length = 640
Score = 28.3 bits (60), Expect = 7.8
Identities = 17/62 (27%), Positives = 34/62 (54%), Gaps = 1/62 (1%)
Frame = -1
Query: 571 RAELEKQKANMKLRSQACEDAKQEYLEQLRKTNEAQRQHYEQRLPHVFKQLQ-DLDEKRI 395
+ E +K+ A ++L + +++ LEQ R ++Q YE L K++Q D + +R+
Sbjct: 125 KVEFQKELAAIELEKTRVDYDERKKLEQQRAQVKSQMSRYEDELAR--KRMQADHEAQRV 182
Query: 394 KN 389
+N
Sbjct: 183 RN 184
>01_03_0051 - 11985456-11985803
Length = 115
Score = 28.3 bits (60), Expect = 7.8
Identities = 14/29 (48%), Positives = 17/29 (58%)
Frame = +1
Query: 88 WIVDRRVSLACSRRRSPGTPSGGCAAGDG 174
W+ RR ACSR S + SGGC A +G
Sbjct: 18 WLKRRRTG-ACSRASSAWSRSGGCDAQNG 45
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,777,642
Number of Sequences: 37544
Number of extensions: 423128
Number of successful extensions: 1596
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1537
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1594
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2268190812
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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