Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP02_T7_O22
         (975 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AK096721-1|BAC04850.1|  180|Homo sapiens protein ( Homo sapiens ...    36   0.17 
BC113562-1|AAI13563.1|  416|Homo sapiens hepatocyte cell adhesio...    36   0.30 
BC104831-1|AAI04832.1|  416|Homo sapiens hepatocyte cell adhesio...    36   0.30 
AY047587-1|AAQ93018.1|  416|Homo sapiens hypothetical protein pr...    36   0.30 
AL834419-1|CAD39081.1|  165|Homo sapiens hypothetical protein pr...    36   0.30 
AK098396-1|BAC05297.1|  416|Homo sapiens protein ( Homo sapiens ...    36   0.30 
AC006011-2|AAX82033.1| 1336|Homo sapiens unknown protein.              33   1.2  
AB044749-1|BAB32435.1| 1336|Homo sapiens WDC146 protein.               33   1.2  
BC013284-1|AAH13284.1|  276|Homo sapiens LOC642031 protein protein.    33   1.6  
AL162741-4|CAI23246.1|  255|Homo sapiens tumor necrosis factor r...    32   2.8  
AF241229-1|AAF63506.1|  255|Homo sapiens GITR-D protein.               32   2.8  
AF129756-17|AAD18086.1| 2157|Homo sapiens BAT2 protein.                32   3.6  
BC030225-1|AAH30225.1|  134|Homo sapiens SNX22 protein protein.        31   8.4  
BC028012-1|AAH28012.1|  670|Homo sapiens PML-RARA regulated adap...    31   8.4  
AK125166-1|BAC86069.1|  201|Homo sapiens protein ( Homo sapiens ...    31   8.4  
AJ272324-1|CAC17767.1|  718|Homo sapiens adaptor molecule-1 prot...    31   8.4  
M55172-1|AAA62824.1| 2316|Homo sapiens large aggregating cartila...    27   9.3  

>AK096721-1|BAC04850.1|  180|Homo sapiens protein ( Homo sapiens
           cDNA FLJ39402 fis, clone PLACE6011975. ).
          Length = 180

 Score = 36.3 bits (80), Expect = 0.17
 Identities = 23/62 (37%), Positives = 28/62 (45%), Gaps = 1/62 (1%)
 Frame = +3

Query: 303 RGQNPDEVGGLPRSTLQPDGAAHPKDAQPTEPSRRIEGSETSAVSV-RQPVGPPRRCRWC 479
           RG+   + GG P   L   G  HP   +P EP  R E  + +  SV   P GP  R R C
Sbjct: 83  RGRRQGQGGGAPALLLPRPGCRHPHPPRP-EPRLRAEPGKVTGASVPAPPSGPLPRLRPC 141

Query: 480 PG 485
            G
Sbjct: 142 CG 143


>BC113562-1|AAI13563.1|  416|Homo sapiens hepatocyte cell adhesion
           molecule protein.
          Length = 416

 Score = 35.5 bits (78), Expect = 0.30
 Identities = 17/34 (50%), Positives = 19/34 (55%)
 Frame = -2

Query: 521 PTRQAGSGPAGYSGTPAAPSGRPDGLPYRDGRRF 420
           P      GP GYS +PA P GR  GLP R  RR+
Sbjct: 329 PRSATEPGPPGYSVSPAVP-GRSPGLPIRSARRY 361


>BC104831-1|AAI04832.1|  416|Homo sapiens hepatocyte cell adhesion
           molecule protein.
          Length = 416

 Score = 35.5 bits (78), Expect = 0.30
 Identities = 17/34 (50%), Positives = 19/34 (55%)
 Frame = -2

Query: 521 PTRQAGSGPAGYSGTPAAPSGRPDGLPYRDGRRF 420
           P      GP GYS +PA P GR  GLP R  RR+
Sbjct: 329 PRSATEPGPPGYSVSPAVP-GRSPGLPIRSARRY 361


>AY047587-1|AAQ93018.1|  416|Homo sapiens hypothetical protein
           protein.
          Length = 416

 Score = 35.5 bits (78), Expect = 0.30
 Identities = 17/34 (50%), Positives = 19/34 (55%)
 Frame = -2

Query: 521 PTRQAGSGPAGYSGTPAAPSGRPDGLPYRDGRRF 420
           P      GP GYS +PA P GR  GLP R  RR+
Sbjct: 329 PRSATEPGPPGYSVSPAVP-GRSPGLPIRSARRY 361


>AL834419-1|CAD39081.1|  165|Homo sapiens hypothetical protein
           protein.
          Length = 165

 Score = 35.5 bits (78), Expect = 0.30
 Identities = 17/34 (50%), Positives = 19/34 (55%)
 Frame = -2

Query: 521 PTRQAGSGPAGYSGTPAAPSGRPDGLPYRDGRRF 420
           P      GP GYS +PA P GR  GLP R  RR+
Sbjct: 78  PRSATEPGPPGYSVSPAVP-GRSPGLPIRSARRY 110


>AK098396-1|BAC05297.1|  416|Homo sapiens protein ( Homo sapiens
           cDNA FLJ25530 fis, clone CBR07652. ).
          Length = 416

 Score = 35.5 bits (78), Expect = 0.30
 Identities = 17/34 (50%), Positives = 19/34 (55%)
 Frame = -2

Query: 521 PTRQAGSGPAGYSGTPAAPSGRPDGLPYRDGRRF 420
           P      GP GYS +PA P GR  GLP R  RR+
Sbjct: 329 PRSATEPGPPGYSVSPAVP-GRSPGLPIRSARRY 361


>AC006011-2|AAX82033.1| 1336|Homo sapiens unknown protein.
          Length = 1336

 Score = 33.5 bits (73), Expect = 1.2
 Identities = 14/27 (51%), Positives = 15/27 (55%)
 Frame = -2

Query: 521 PTRQAGSGPAGYSGTPAAPSGRPDGLP 441
           P  Q G GP G+ G P  P G P GLP
Sbjct: 641 PLHQGGGGPQGFMG-PQGPQGPPQGLP 666


>AB044749-1|BAB32435.1| 1336|Homo sapiens WDC146 protein.
          Length = 1336

 Score = 33.5 bits (73), Expect = 1.2
 Identities = 14/27 (51%), Positives = 15/27 (55%)
 Frame = -2

Query: 521 PTRQAGSGPAGYSGTPAAPSGRPDGLP 441
           P  Q G GP G+ G P  P G P GLP
Sbjct: 641 PLHQGGGGPQGFMG-PQGPQGPPQGLP 666


>BC013284-1|AAH13284.1|  276|Homo sapiens LOC642031 protein protein.
          Length = 276

 Score = 33.1 bits (72), Expect = 1.6
 Identities = 25/82 (30%), Positives = 35/82 (42%), Gaps = 5/82 (6%)
 Frame = +3

Query: 315 PDEVGGLPRSTLQPDGAAHPKDA-----QPTEPSRRIEGSETSAVSVRQPVGPPRRCRWC 479
           P++ G L  S L P      K       QP  P R + G E     +R  +GP + C+  
Sbjct: 138 PEQPGPLTPSLLGPGRPRQQKQPLMGPEQPCPPKRPLMGPEQPCQPLRPLMGPNKPCKPQ 197

Query: 480 PGIPRWTRTSLPGRDAIHRRPV 545
           P +P   R SL G+     RP+
Sbjct: 198 PLLPIPDRPSLLGQPGPPCRPL 219


>AL162741-4|CAI23246.1|  255|Homo sapiens tumor necrosis factor
           receptor superfamily, member 18 protein.
          Length = 255

 Score = 32.3 bits (70), Expect = 2.8
 Identities = 15/47 (31%), Positives = 23/47 (48%)
 Frame = +3

Query: 354 PDGAAHPKDAQPTEPSRRIEGSETSAVSVRQPVGPPRRCRWCPGIPR 494
           P+ A+ P+ +  ++  RR  G ET      +P GPP      PG P+
Sbjct: 145 PEAASSPRKSGASDRQRRRGGWETCGCEPGRPPGPPTAASPSPGAPQ 191


>AF241229-1|AAF63506.1|  255|Homo sapiens GITR-D protein.
          Length = 255

 Score = 32.3 bits (70), Expect = 2.8
 Identities = 15/47 (31%), Positives = 23/47 (48%)
 Frame = +3

Query: 354 PDGAAHPKDAQPTEPSRRIEGSETSAVSVRQPVGPPRRCRWCPGIPR 494
           P+ A+ P+ +  ++  RR  G ET      +P GPP      PG P+
Sbjct: 145 PEAASSPRKSGASDRQRRRGGWETCGCEPGRPPGPPTAASPSPGAPQ 191


>AF129756-17|AAD18086.1| 2157|Homo sapiens BAT2 protein.
          Length = 2157

 Score = 31.9 bits (69), Expect = 3.6
 Identities = 16/39 (41%), Positives = 18/39 (46%)
 Frame = +3

Query: 423  TSAVSVRQPVGPPRRCRWCPGIPRWTRTSLPGRDAIHRR 539
            T  V + Q   PP   RW P    W RT LP R+   RR
Sbjct: 2103 TQRVDLYQQASPPDALRWIP--KPWERTGLPPREGPSRR 2139


>BC030225-1|AAH30225.1|  134|Homo sapiens SNX22 protein protein.
          Length = 134

 Score = 30.7 bits (66), Expect = 8.4
 Identities = 17/37 (45%), Positives = 21/37 (56%)
 Frame = +3

Query: 402 RRIEGSETSAVSVRQPVGPPRRCRWCPGIPRWTRTSL 512
           R +EG + S   VRQPV P  R R  PG PR  + +L
Sbjct: 96  RALEGPQGSEGQVRQPVLPGVRERRVPGQPRRRKAAL 132


>BC028012-1|AAH28012.1|  670|Homo sapiens PML-RARA regulated adaptor
           molecule 1 protein.
          Length = 670

 Score = 30.7 bits (66), Expect = 8.4
 Identities = 19/46 (41%), Positives = 26/46 (56%), Gaps = 3/46 (6%)
 Frame = +3

Query: 321 EVGGLPRSTLQPDGAAHP-KDAQPTE--PSRRIEGSETSAVSVRQP 449
           E+GGLPR++ +P+  + P K  QP    P R+    E SAV  R P
Sbjct: 325 ELGGLPRTSSEPEFNSLPRKLLQPERRGPPRKFSQPEPSAVLKRHP 370


>AK125166-1|BAC86069.1|  201|Homo sapiens protein ( Homo sapiens
           cDNA FLJ43176 fis, clone FCBBF3008944. ).
          Length = 201

 Score = 30.7 bits (66), Expect = 8.4
 Identities = 32/104 (30%), Positives = 43/104 (41%), Gaps = 9/104 (8%)
 Frame = +2

Query: 299 PPRSEPG*GRGAT--------AVNTTTRRRGSPQGRPADGAFEANRRL*NVGRLGTAAR- 451
           P +S PG G+G          A     RR G  + RPA+GA E         R G  A  
Sbjct: 33  PGQSGPGHGQGTATPGPGQVRAAQARARRGGGARERPAEGAREPGAAR-RGARAGPGAHL 91

Query: 452 RAAQTVPLVSRNTPLDQNQPAGSGRDTPSTGRSNHSXGGALKXL 583
           RAA+T+      TP  + + A +G   P   +S  S G   + L
Sbjct: 92  RAARTL-RARAQTPQLRREAACAGSFFPKCRQSPRSHGQPFRQL 134


>AJ272324-1|CAC17767.1|  718|Homo sapiens adaptor molecule-1
           protein.
          Length = 718

 Score = 30.7 bits (66), Expect = 8.4
 Identities = 19/46 (41%), Positives = 26/46 (56%), Gaps = 3/46 (6%)
 Frame = +3

Query: 321 EVGGLPRSTLQPDGAAHP-KDAQPTE--PSRRIEGSETSAVSVRQP 449
           E+GGLPR++ +P+  + P K  QP    P R+    E SAV  R P
Sbjct: 373 ELGGLPRTSSEPEFNSLPRKLLQPERRGPPRKFSQPEPSAVLKRHP 418


>M55172-1|AAA62824.1| 2316|Homo sapiens large aggregating cartilage
            proteoglycan core protein protein.
          Length = 2316

 Score = 26.6 bits (56), Expect(2) = 9.3
 Identities = 14/30 (46%), Positives = 17/30 (56%), Gaps = 1/30 (3%)
 Frame = -2

Query: 536  TVYRVPTRQ-AGSGPAGYSGTPAAPSGRPD 450
            +V + PT Q AG GP+G      A SG PD
Sbjct: 1829 SVTQAPTAQEAGEGPSGILELSGAHSGAPD 1858



 Score = 22.2 bits (45), Expect(2) = 9.3
 Identities = 8/13 (61%), Positives = 8/13 (61%)
 Frame = -2

Query: 467  PSGRPDGLPYRDG 429
            PSG P G PY  G
Sbjct: 1879 PSGEPPGTPYFSG 1891


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 94,732,560
Number of Sequences: 237096
Number of extensions: 2284394
Number of successful extensions: 11976
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 10749
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11915
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 12991778748
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)