Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP02_T7_O02
         (785 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellif...    24   1.4  
AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor pr...    23   2.4  
X72575-1|CAA51167.1|  168|Apis mellifera Apidaecin precursor pro...    23   4.3  
DQ325077-1|ABD14091.1|  181|Apis mellifera complementary sex det...    23   4.3  
DQ325076-1|ABD14090.1|  191|Apis mellifera complementary sex det...    23   4.3  
Z26319-1|CAA81228.1|  464|Apis mellifera royal jelly protein RJP...    22   5.6  
DQ026031-1|AAY87890.1|  601|Apis mellifera nicotinic acetylcholi...    22   5.6  
DQ000307-1|AAY21180.1|  423|Apis mellifera major royal jelly pro...    22   5.6  
AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cycl...    22   7.4  
X72577-1|CAA51169.1|  283|Apis mellifera Apidaecin precursor pro...    21   9.8  
AJ849455-1|CAH60991.1|  366|Apis mellifera twist protein protein.      21   9.8  
AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor p...    21   9.8  

>AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellifera
           ORF for hypotheticalprotein. ).
          Length = 998

 Score = 24.2 bits (50), Expect = 1.4
 Identities = 25/93 (26%), Positives = 39/93 (41%), Gaps = 1/93 (1%)
 Frame = -1

Query: 323 SACCPTPPPSLKLGLALTTSSTSCTPSVLSYTGTSVRVWRRESSPKPVRTWLPSKRIT-K 147
           S  CP P     +G+ LT  +TS  P+ + Y G +  ++    S   +  WL   R+  +
Sbjct: 632 STKCPYPSYYSYIGV-LTLVATSM-PTYICYLGKAYLMYAIAGSQCFINIWLLGSRLDWE 689

Query: 146 KSAWTPLKARVREPKSTKPVKYLLWRTRTVLHS 48
             A +PL+      K    V  L   T  V+ S
Sbjct: 690 DHASSPLEPSAVPSKFCLSVTLLTVATSLVIVS 722


>AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor
           protein.
          Length = 501

 Score = 23.4 bits (48), Expect = 2.4
 Identities = 13/39 (33%), Positives = 20/39 (51%)
 Frame = -1

Query: 404 QPVSRSVSTTSHPPWCPEATWPRFNVPSACCPTPPPSLK 288
           +PV  S +TT+ P    ++T  R ++ S C  T  P  K
Sbjct: 320 KPVLSSSTTTTSPMTSTKSTIVRNHLNSTCSVTNSPHQK 358


>X72575-1|CAA51167.1|  168|Apis mellifera Apidaecin precursor
           protein.
          Length = 168

 Score = 22.6 bits (46), Expect = 4.3
 Identities = 8/11 (72%), Positives = 9/11 (81%)
 Frame = +3

Query: 105 RLPHPRLQRSP 137
           R PHPRL+R P
Sbjct: 110 RPPHPRLRREP 120



 Score = 22.6 bits (46), Expect = 4.3
 Identities = 8/11 (72%), Positives = 9/11 (81%)
 Frame = +3

Query: 105 RLPHPRLQRSP 137
           R PHPRL+R P
Sbjct: 136 RPPHPRLRREP 146


>DQ325077-1|ABD14091.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 22.6 bits (46), Expect = 4.3
 Identities = 11/27 (40%), Positives = 15/27 (55%)
 Frame = -1

Query: 356 PEATWPRFNVPSACCPTPPPSLKLGLA 276
           P   +PRF  P+A    PP + + GLA
Sbjct: 153 PPTPFPRFIPPNAYRFRPPLNPRFGLA 179


>DQ325076-1|ABD14090.1|  191|Apis mellifera complementary sex
           determiner protein.
          Length = 191

 Score = 22.6 bits (46), Expect = 4.3
 Identities = 11/27 (40%), Positives = 15/27 (55%)
 Frame = -1

Query: 356 PEATWPRFNVPSACCPTPPPSLKLGLA 276
           P   +PRF  P+A    PP + + GLA
Sbjct: 163 PPTPFPRFIPPNAYRFRPPLNPRFGLA 189


>Z26319-1|CAA81228.1|  464|Apis mellifera royal jelly protein
           RJP57-2 protein.
          Length = 464

 Score = 22.2 bits (45), Expect = 5.6
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = -3

Query: 315 LSNTTAIAEAWARLDHKFD 259
           L+NT  +   W  LD+ FD
Sbjct: 32  LTNTLNVIHKWKYLDYDFD 50


>DQ026031-1|AAY87890.1|  601|Apis mellifera nicotinic acetylcholine
           receptor alpha1subunit protein.
          Length = 601

 Score = 22.2 bits (45), Expect = 5.6
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = -2

Query: 403 NRFQGRYQLPA 371
           NRF G Y++PA
Sbjct: 435 NRFSGEYEIPA 445


>DQ000307-1|AAY21180.1|  423|Apis mellifera major royal jelly
           protein 9 protein.
          Length = 423

 Score = 22.2 bits (45), Expect = 5.6
 Identities = 9/21 (42%), Positives = 14/21 (66%)
 Frame = -2

Query: 442 QNQAYYPIRRLVSNRFQGRYQ 380
           Q +A+Y +R   +N FQ +YQ
Sbjct: 17  QAKAHYSLRDFKANIFQVKYQ 37


>AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cyclase
           beta-3 protein.
          Length = 832

 Score = 21.8 bits (44), Expect = 7.4
 Identities = 10/18 (55%), Positives = 12/18 (66%)
 Frame = -3

Query: 498 MLYRGDVVPRDVNAAIAT 445
           M+Y G  V  D+NA IAT
Sbjct: 319 MMYLGTPVMPDLNALIAT 336


>X72577-1|CAA51169.1|  283|Apis mellifera Apidaecin precursor
           protein.
          Length = 283

 Score = 21.4 bits (43), Expect = 9.8
 Identities = 8/14 (57%), Positives = 11/14 (78%)
 Frame = +3

Query: 90  WLSTLRLPHPRLQR 131
           ++S  R PHPRL+R
Sbjct: 104 YISQPRPPHPRLRR 117



 Score = 21.4 bits (43), Expect = 9.8
 Identities = 8/14 (57%), Positives = 11/14 (78%)
 Frame = +3

Query: 90  WLSTLRLPHPRLQR 131
           ++S  R PHPRL+R
Sbjct: 160 YISQPRPPHPRLRR 173


>AJ849455-1|CAH60991.1|  366|Apis mellifera twist protein protein.
          Length = 366

 Score = 21.4 bits (43), Expect = 9.8
 Identities = 7/22 (31%), Positives = 15/22 (68%)
 Frame = +1

Query: 220 DVPVYESTLGVHEVELVVKASP 285
           D+P+Y+S   +H  +++ + SP
Sbjct: 66  DLPIYQSHHHLHHHQVLYQQSP 87


>AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor
           protein.
          Length = 587

 Score = 21.4 bits (43), Expect = 9.8
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = -2

Query: 82  IFYGALAPFYIPVI 41
           + Y AL  FYIP++
Sbjct: 248 VVYSALGSFYIPML 261


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 224,624
Number of Sequences: 438
Number of extensions: 5811
Number of successful extensions: 22
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 24760908
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)