Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP02_T7_N14
         (799 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC040074-1|AAH40074.1|  570|Homo sapiens FAM20C protein protein.       32   2.8  
AF533706-1|AAQ09019.1|  584|Homo sapiens unknown protein protein.      32   2.8  
BC113428-1|AAI13429.1|  343|Homo sapiens aristaless-like homeobo...    31   6.4  
BC112007-1|AAI12008.1|  343|Homo sapiens ALX3 protein protein.         31   6.4  
AL160006-1|CAI22714.1|  343|Homo sapiens aristaless-like homeobo...    31   6.4  
AF008203-1|AAD01418.1|  343|Homo sapiens homeobox protein protein.     31   6.4  
AK125767-1|BAC86280.1|  168|Homo sapiens protein ( Homo sapiens ...    30   8.4  

>BC040074-1|AAH40074.1|  570|Homo sapiens FAM20C protein protein.
          Length = 570

 Score = 31.9 bits (69), Expect = 2.8
 Identities = 22/66 (33%), Positives = 31/66 (46%), Gaps = 4/66 (6%)
 Frame = -1

Query: 268 RLDCXGGRPTGPPNDEITPPARTADIGAPA-LRLHLR*GAPPRRRLCCGRS---NQRRQR 101
           RL+  G RP+G P      PA  A++ AP   ++  R G PP      G +   N+   R
Sbjct: 18  RLERRGARPSGEPGCSCAQPA--AEVAAPGWAQVRGRPGEPPAASSAAGDAGWPNKHTLR 75

Query: 100 VFQSFS 83
           + Q FS
Sbjct: 76  ILQDFS 81


>AF533706-1|AAQ09019.1|  584|Homo sapiens unknown protein protein.
          Length = 584

 Score = 31.9 bits (69), Expect = 2.8
 Identities = 22/66 (33%), Positives = 31/66 (46%), Gaps = 4/66 (6%)
 Frame = -1

Query: 268 RLDCXGGRPTGPPNDEITPPARTADIGAPA-LRLHLR*GAPPRRRLCCGRS---NQRRQR 101
           RL+  G RP+G P      PA  A++ AP   ++  R G PP      G +   N+   R
Sbjct: 32  RLERRGARPSGEPGCSCAQPA--AEVAAPGWAQVRGRPGEPPAASSAAGDAGWPNKHTLR 89

Query: 100 VFQSFS 83
           + Q FS
Sbjct: 90  ILQDFS 95


>BC113428-1|AAI13429.1|  343|Homo sapiens aristaless-like homeobox 3
           protein.
          Length = 343

 Score = 30.7 bits (66), Expect = 6.4
 Identities = 23/65 (35%), Positives = 30/65 (46%)
 Frame = -1

Query: 265 LDCXGGRPTGPPNDEITPPARTADIGAPALRLHLR*GAPPRRRLCCGRSNQRRQRVFQSF 86
           LDC GG   GP N + +P    A     +L L L  G P    L   +S +RR R   +F
Sbjct: 108 LDCRGGPRDGPSNLQGSPGPCLA-----SLHLPLSPGLPDSMELAKNKSKKRRNRT--TF 160

Query: 85  SVLQI 71
           S  Q+
Sbjct: 161 STFQL 165


>BC112007-1|AAI12008.1|  343|Homo sapiens ALX3 protein protein.
          Length = 343

 Score = 30.7 bits (66), Expect = 6.4
 Identities = 23/65 (35%), Positives = 30/65 (46%)
 Frame = -1

Query: 265 LDCXGGRPTGPPNDEITPPARTADIGAPALRLHLR*GAPPRRRLCCGRSNQRRQRVFQSF 86
           LDC GG   GP N + +P    A     +L L L  G P    L   +S +RR R   +F
Sbjct: 108 LDCRGGPRDGPSNLQGSPGPCLA-----SLHLPLSPGLPDSMELAKNKSKKRRNRT--TF 160

Query: 85  SVLQI 71
           S  Q+
Sbjct: 161 STFQL 165


>AL160006-1|CAI22714.1|  343|Homo sapiens aristaless-like homeobox 3
           protein.
          Length = 343

 Score = 30.7 bits (66), Expect = 6.4
 Identities = 23/65 (35%), Positives = 30/65 (46%)
 Frame = -1

Query: 265 LDCXGGRPTGPPNDEITPPARTADIGAPALRLHLR*GAPPRRRLCCGRSNQRRQRVFQSF 86
           LDC GG   GP N + +P    A     +L L L  G P    L   +S +RR R   +F
Sbjct: 108 LDCRGGPRDGPSNLQGSPGPCLA-----SLHLPLSPGLPDSMELAKNKSKKRRNRT--TF 160

Query: 85  SVLQI 71
           S  Q+
Sbjct: 161 STFQL 165


>AF008203-1|AAD01418.1|  343|Homo sapiens homeobox protein protein.
          Length = 343

 Score = 30.7 bits (66), Expect = 6.4
 Identities = 23/65 (35%), Positives = 30/65 (46%)
 Frame = -1

Query: 265 LDCXGGRPTGPPNDEITPPARTADIGAPALRLHLR*GAPPRRRLCCGRSNQRRQRVFQSF 86
           LDC GG   GP N + +P    A     +L L L  G P    L   +S +RR R   +F
Sbjct: 108 LDCRGGPRDGPSNLQGSPGPCLA-----SLHLPLSPGLPDSMELAKNKSKKRRNRT--TF 160

Query: 85  SVLQI 71
           S  Q+
Sbjct: 161 STFQL 165


>AK125767-1|BAC86280.1|  168|Homo sapiens protein ( Homo sapiens
           cDNA FLJ43779 fis, clone TESTI2051488. ).
          Length = 168

 Score = 30.3 bits (65), Expect = 8.4
 Identities = 28/112 (25%), Positives = 39/112 (34%), Gaps = 14/112 (12%)
 Frame = +3

Query: 168 CSRSAGAPISAVRAGGVISSFGGPVGRPPXQSRR------------SARFSRTGWAATAE 311
           C  + G P S++ +G  IS    P       SRR            S   SR    ++  
Sbjct: 53  CPEAGGPPSSSIASGSSISVGNSPSHSHSHTSRRCGGSSRSRECCSSLHSSRGSRGSSWS 112

Query: 312 VSPPATSL--TRCYSHTEEANREHLSSTHKHALHRKNLHPPAEPEHRRIARH 461
            SPP ++     C+SH    +R H  S   H  H  + H      H     H
Sbjct: 113 SSPPGSTCRWCSCHSHHHSHHRSHHRS--HHCSHHHSHHHSGHHSHHNFHNH 162


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 114,711,685
Number of Sequences: 237096
Number of extensions: 2625354
Number of successful extensions: 6968
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 6509
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6967
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9813323168
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)