Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP02_T7_M22
(824 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC29B12.02c |set2||histone lysine methyltransferase Set2 |Schi... 29 1.1
SPCC970.04c |mob2||protein kinase activator Mob2|Schizosaccharom... 27 2.4
SPCC70.05c |||serine/threonine protein kinase |Schizosaccharomyc... 27 3.2
SPBC23G7.13c |||urea transporter |Schizosaccharomyces pombe|chr ... 26 5.6
SPBC30B4.01c |wsc1|SPBC3D6.14c|transmembrane receptor Wsc1 |Schi... 26 5.6
SPAC26F1.01 |sec74|SPAPJ691.01c|guanyl-nucleotide exchange facto... 26 7.5
SPAC23H4.01c ||SPAP27G11.01|sterol binding ankyrin repeat protei... 26 7.5
SPCC297.05 |||diacylglycerol binding protein |Schizosaccharomyce... 25 9.9
SPAC328.06 |ubp2||ubiquitin C-terminal hydrolase Ubp2|Schizosacc... 25 9.9
SPBC23E6.09 |ssn6||transcriptional corepressor Ssn6|Schizosaccha... 25 9.9
SPAC521.04c |||calcium permease |Schizosaccharomyces pombe|chr 1... 25 9.9
>SPAC29B12.02c |set2||histone lysine methyltransferase Set2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 798
Score = 28.7 bits (61), Expect = 1.1
Identities = 20/85 (23%), Positives = 35/85 (41%)
Frame = -3
Query: 453 STVGIATPF*EGGTT*EPSHRSRWKLHTRPSRPNGKPSTSPKARHYGSS*SINGAFRHHK 274
S++ + TP E +S W T + G +S + + S G +
Sbjct: 5 SSLSVLTPLNEENV----DRKSSWSKDTIAVQAVGSSPSSSSSHDFESKEDAEGMNKDES 60
Query: 273 HRSPSSSNPSLATKGSTSELTHRHS 199
SPS+S+PS A+ S S+ + +
Sbjct: 61 APSPSTSSPSSASSRSQSKYVRKEA 85
>SPCC970.04c |mob2||protein kinase activator
Mob2|Schizosaccharomyces pombe|chr 3|||Manual
Length = 244
Score = 27.5 bits (58), Expect = 2.4
Identities = 17/42 (40%), Positives = 21/42 (50%)
Frame = -3
Query: 297 NGAFRHHKHRSPSSSNPSLATKGSTSELTHRHSPLSFSPDLL 172
N + RH SSS+ S + K STS+L SP S P L
Sbjct: 14 NRSKRHQNLSDASSSSGSFSKKSSTSQLVRTGSP-SVEPTAL 54
>SPCC70.05c |||serine/threonine protein kinase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 781
Score = 27.1 bits (57), Expect = 3.2
Identities = 24/88 (27%), Positives = 38/88 (43%), Gaps = 4/88 (4%)
Frame = -3
Query: 396 HRSRWKLHTRPSRPNGKPSTSPKARHYGSS*SINGAFRHHKHRSPSSSNPS--LATKGST 223
H+S+ H + S PN + + P R S+ G+ + + S + S L +K
Sbjct: 179 HKSQSYQHLKNSPPNSRTARKPVPRRANSASHNLGSTKSPNGNAKESLSRSAELPSKAKP 238
Query: 222 SELT--HRHSPLSFSPDLLSGSRFRSGG 145
E+ +R P SP+ S R R GG
Sbjct: 239 MEINNGYRKKPSPLSPN--SSIRNREGG 264
>SPBC23G7.13c |||urea transporter |Schizosaccharomyces pombe|chr
2|||Manual
Length = 664
Score = 26.2 bits (55), Expect = 5.6
Identities = 9/22 (40%), Positives = 15/22 (68%)
Frame = -2
Query: 493 ISTMTWSSTLLVSIYSRHRYAI 428
+S+ TW+STLL S ++Y +
Sbjct: 63 VSSWTWASTLLTSAQKTYQYGV 84
>SPBC30B4.01c |wsc1|SPBC3D6.14c|transmembrane receptor Wsc1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 374
Score = 26.2 bits (55), Expect = 5.6
Identities = 28/92 (30%), Positives = 37/92 (40%)
Frame = -3
Query: 414 TT*EPSHRSRWKLHTRPSRPNGKPSTSPKARHYGSS*SINGAFRHHKHRSPSSSNPSLAT 235
TT PS S + S + S+S + SS S + + S SSS+ S+
Sbjct: 151 TTTSPSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSVPI 210
Query: 234 KGSTSELTHRHSPLSFSPDLLSGSRFRSGGRF 139
STS +H S S S S SR S F
Sbjct: 211 TSSTSS-SHSSSS-SSSSSSSSSSRPSSSSSF 240
>SPAC26F1.01 |sec74|SPAPJ691.01c|guanyl-nucleotide exchange factor
Sec74|Schizosaccharomyces pombe|chr 1|||Manual
Length = 928
Score = 25.8 bits (54), Expect = 7.5
Identities = 16/53 (30%), Positives = 25/53 (47%)
Frame = -3
Query: 348 KPSTSPKARHYGSS*SINGAFRHHKHRSPSSSNPSLATKGSTSELTHRHSPLS 190
KPS +R G S ++ A K S S P + T +++ +HSP+S
Sbjct: 24 KPSPPLPSRRKGKS-ALRSALE--KKNRKSKSKPKVTITSDTPKVSSQHSPVS 73
>SPAC23H4.01c ||SPAP27G11.01|sterol binding ankyrin repeat
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 945
Score = 25.8 bits (54), Expect = 7.5
Identities = 12/27 (44%), Positives = 13/27 (48%)
Frame = +2
Query: 209 WVSSLVEPFVASDGFDEDGDRCLWCLK 289
W P VA D DEDG +W LK
Sbjct: 898 WEPRWFVPSVAGDDEDEDGSGPIWQLK 924
>SPCC297.05 |||diacylglycerol binding protein |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 973
Score = 25.4 bits (53), Expect = 9.9
Identities = 11/35 (31%), Positives = 18/35 (51%)
Frame = -3
Query: 654 NKVTLYXTCIRPVMTYASVXFXXSARTHLKSLQVI 550
N +T+ + +RPV TY S +HL + V+
Sbjct: 220 NDITIKESDVRPVSTYHSFALTSDNNSHLYGICVV 254
>SPAC328.06 |ubp2||ubiquitin C-terminal hydrolase
Ubp2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1141
Score = 25.4 bits (53), Expect = 9.9
Identities = 14/58 (24%), Positives = 25/58 (43%)
Frame = -3
Query: 393 RSRWKLHTRPSRPNGKPSTSPKARHYGSS*SINGAFRHHKHRSPSSSNPSLATKGSTS 220
++R LH + R GKP +YG I + + P ++P+ + +TS
Sbjct: 66 KTRKHLHVKVRRDRGKPLIEEPEENYGIKDRIPVYYEEEELPEPHVTSPTKSEFATTS 123
>SPBC23E6.09 |ssn6||transcriptional corepressor
Ssn6|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1102
Score = 25.4 bits (53), Expect = 9.9
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = -1
Query: 329 KHVITDPPDPLTVLLGTTSTGH 264
+H++ +PP PLTVL GH
Sbjct: 499 RHILDNPPKPLTVLDIYFQIGH 520
>SPAC521.04c |||calcium permease |Schizosaccharomyces pombe|chr
1|||Manual
Length = 881
Score = 25.4 bits (53), Expect = 9.9
Identities = 14/40 (35%), Positives = 23/40 (57%)
Frame = -3
Query: 300 INGAFRHHKHRSPSSSNPSLATKGSTSELTHRHSPLSFSP 181
+NG +HH +R +SS L++ GS +E + H P + P
Sbjct: 664 VNGNSQHHHNRDDASS--GLSSNGSENE-SLEHEPTNELP 700
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,937,532
Number of Sequences: 5004
Number of extensions: 57071
Number of successful extensions: 186
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 170
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 182
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 404442380
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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