Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP02_T7_M19
(755 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholi... 31 0.015
AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein. 26 0.33
DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 25 0.58
DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channe... 25 1.0
DQ257415-1|ABB81846.1| 430|Apis mellifera yellow-like protein p... 25 1.0
DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chlor... 24 1.3
DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 24 1.3
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 24 1.8
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 23 2.3
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 23 2.3
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 23 2.3
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 23 2.3
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 23 2.3
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 23 2.3
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 23 2.3
DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chlor... 23 3.1
DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholi... 23 3.1
AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic ac... 23 3.1
AJ547798-1|CAD67999.1| 587|Apis mellifera octopamine receptor p... 23 3.1
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 23 4.1
DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated... 22 5.4
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 22 7.1
DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholi... 21 9.4
AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic ac... 21 9.4
>DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholine
receptor alpha9subunit protein.
Length = 431
Score = 30.7 bits (66), Expect = 0.015
Identities = 10/31 (32%), Positives = 17/31 (54%)
Frame = -1
Query: 746 NNWPNDMQTCTFKFGXRMHXSDEMDFVIDXK 654
++WP D C FG +H +E++ +D K
Sbjct: 174 SSWPYDTHRCRINFGSWVHSGEEVNIFLDKK 204
>AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein.
Length = 898
Score = 26.2 bits (55), Expect = 0.33
Identities = 11/34 (32%), Positives = 19/34 (55%)
Frame = -1
Query: 737 PNDMQTCTFKFGXRMHXSDEMDFVIDXKNIQYVR 636
P D++ FK+G H + + +D KN++Y R
Sbjct: 655 PQDIENI-FKYGYVSHANQRNMYKLDLKNMKYTR 687
>DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine
receptor alpha3subunit protein.
Length = 566
Score = 25.4 bits (53), Expect = 0.58
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = -1
Query: 740 WPNDMQTCTFKFGXRMHXSDEMDFVIDXKNIQYVRVRSV 624
+P D QTC KFG + F +D ++I +R ++V
Sbjct: 156 FPFDEQTCVMKFGSWTYDG----FQVDLRHIDEIRGKNV 190
>DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channel
protein.
Length = 463
Score = 24.6 bits (51), Expect = 1.0
Identities = 9/18 (50%), Positives = 11/18 (61%)
Frame = -1
Query: 755 MQLNNWPNDMQTCTFKFG 702
M L N+P D Q C +FG
Sbjct: 132 MNLENFPMDTQRCPLQFG 149
>DQ257415-1|ABB81846.1| 430|Apis mellifera yellow-like protein
protein.
Length = 430
Score = 24.6 bits (51), Expect = 1.0
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = -3
Query: 321 SLISNLSNTCDLTPLPEWSCEQSAWWGACGRVL 223
SL +N + LTP P W+ ++ GACG +
Sbjct: 98 SLDTNRGGSPKLTPYPNWAQNKA---GACGSAI 127
>DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chloride
channel protein.
Length = 428
Score = 24.2 bits (50), Expect = 1.3
Identities = 10/27 (37%), Positives = 14/27 (51%)
Frame = -1
Query: 740 WPNDMQTCTFKFGXRMHXSDEMDFVID 660
+P+D Q C + H +DEM F D
Sbjct: 170 YPHDTQECKLQMESLSHTTDEMIFQWD 196
>DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine
receptor beta1subunit protein.
Length = 520
Score = 24.2 bits (50), Expect = 1.3
Identities = 9/26 (34%), Positives = 13/26 (50%)
Frame = -1
Query: 740 WPNDMQTCTFKFGXRMHXSDEMDFVI 663
+P D QTC KFG D++ +
Sbjct: 158 FPFDQQTCIMKFGSWTFNGDQVSLAL 183
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 23.8 bits (49), Expect = 1.8
Identities = 10/31 (32%), Positives = 17/31 (54%)
Frame = -1
Query: 755 MQLNNWPNDMQTCTFKFGXRMHXSDEMDFVI 663
M + +P D Q C KFG + +++D V+
Sbjct: 113 MDIAWFPFDDQHCDMKFGSWTYDGNQVDLVL 143
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 23.4 bits (48), Expect = 2.3
Identities = 9/26 (34%), Positives = 15/26 (57%)
Frame = -1
Query: 740 WPNDMQTCTFKFGXRMHXSDEMDFVI 663
+P D Q C KFG + +++D V+
Sbjct: 118 FPFDDQHCDMKFGSWTYDGNQVDLVL 143
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 23.4 bits (48), Expect = 2.3
Identities = 9/26 (34%), Positives = 15/26 (57%)
Frame = -1
Query: 740 WPNDMQTCTFKFGXRMHXSDEMDFVI 663
+P D Q C KFG + +++D V+
Sbjct: 118 FPFDDQHCDMKFGSWTYDGNQVDLVL 143
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 23.4 bits (48), Expect = 2.3
Identities = 9/26 (34%), Positives = 15/26 (57%)
Frame = -1
Query: 740 WPNDMQTCTFKFGXRMHXSDEMDFVI 663
+P D Q C KFG + +++D V+
Sbjct: 118 FPFDDQHCDMKFGSWTYDGNQVDLVL 143
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 23.4 bits (48), Expect = 2.3
Identities = 9/26 (34%), Positives = 15/26 (57%)
Frame = -1
Query: 740 WPNDMQTCTFKFGXRMHXSDEMDFVI 663
+P D Q C KFG + +++D V+
Sbjct: 118 FPFDDQHCDMKFGSWTYDGNQVDLVL 143
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 23.4 bits (48), Expect = 2.3
Identities = 9/26 (34%), Positives = 15/26 (57%)
Frame = -1
Query: 740 WPNDMQTCTFKFGXRMHXSDEMDFVI 663
+P D Q C KFG + +++D V+
Sbjct: 118 FPFDDQHCDMKFGSWTYDGNQVDLVL 143
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 23.4 bits (48), Expect = 2.3
Identities = 9/26 (34%), Positives = 15/26 (57%)
Frame = -1
Query: 740 WPNDMQTCTFKFGXRMHXSDEMDFVI 663
+P D Q C KFG + +++D V+
Sbjct: 186 FPFDDQHCDMKFGSWTYDGNQVDLVL 211
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 23.4 bits (48), Expect = 2.3
Identities = 9/26 (34%), Positives = 15/26 (57%)
Frame = -1
Query: 740 WPNDMQTCTFKFGXRMHXSDEMDFVI 663
+P D Q C KFG + +++D V+
Sbjct: 186 FPFDDQHCDMKFGSWTYDGNQVDLVL 211
>DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chloride
channel protein.
Length = 383
Score = 23.0 bits (47), Expect = 3.1
Identities = 7/30 (23%), Positives = 16/30 (53%)
Frame = -1
Query: 755 MQLNNWPNDMQTCTFKFGXRMHXSDEMDFV 666
M+ ++P+D Q C+ H + ++ F+
Sbjct: 134 MKFESYPHDTQICSMMIESLSHTTQDLVFI 163
>DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholine
receptor beta2subunit protein.
Length = 427
Score = 23.0 bits (47), Expect = 3.1
Identities = 8/22 (36%), Positives = 11/22 (50%)
Frame = -1
Query: 740 WPNDMQTCTFKFGXRMHXSDEM 675
WP D+ CT H S+E+
Sbjct: 166 WPYDILNCTIHIASWSHGSNEI 187
>AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic
acetylcholine receptorApisa2 subunit protein.
Length = 541
Score = 23.0 bits (47), Expect = 3.1
Identities = 9/23 (39%), Positives = 13/23 (56%)
Frame = -1
Query: 740 WPNDMQTCTFKFGXRMHXSDEMD 672
+P D QTC KFG + ++D
Sbjct: 152 FPFDQQTCFMKFGSWTYDGIQID 174
>AJ547798-1|CAD67999.1| 587|Apis mellifera octopamine receptor
protein.
Length = 587
Score = 23.0 bits (47), Expect = 3.1
Identities = 9/20 (45%), Positives = 11/20 (55%)
Frame = -3
Query: 609 CPVRCRARTVARWKLAWQCS 550
C VRC A + RW W+ S
Sbjct: 19 CSVRCSAASGLRWFEIWRDS 38
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 22.6 bits (46), Expect = 4.1
Identities = 9/23 (39%), Positives = 13/23 (56%)
Frame = -1
Query: 740 WPNDMQTCTFKFGXRMHXSDEMD 672
+P D QTC KFG + ++D
Sbjct: 160 FPFDEQTCVLKFGSWTYDGFKVD 182
>DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 510
Score = 22.2 bits (45), Expect = 5.4
Identities = 8/18 (44%), Positives = 11/18 (61%)
Frame = -1
Query: 755 MQLNNWPNDMQTCTFKFG 702
M+L N+P D Q+C G
Sbjct: 164 MELRNFPMDRQSCPLILG 181
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 21.8 bits (44), Expect = 7.1
Identities = 8/23 (34%), Positives = 13/23 (56%)
Frame = -1
Query: 740 WPNDMQTCTFKFGXRMHXSDEMD 672
+P D+QTC K G + ++D
Sbjct: 160 FPYDVQTCVLKLGSWTYDGFKVD 182
>DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholine
receptor alpha1subunit protein.
Length = 601
Score = 21.4 bits (43), Expect = 9.4
Identities = 8/13 (61%), Positives = 9/13 (69%)
Frame = -1
Query: 740 WPNDMQTCTFKFG 702
+P D QTC KFG
Sbjct: 152 FPFDEQTCFMKFG 164
>AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha-3 protein.
Length = 537
Score = 21.4 bits (43), Expect = 9.4
Identities = 8/23 (34%), Positives = 13/23 (56%)
Frame = -1
Query: 740 WPNDMQTCTFKFGXRMHXSDEMD 672
+P D Q+C KFG + ++D
Sbjct: 165 FPFDEQSCIMKFGSWTYNGAQVD 187
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 135,920
Number of Sequences: 438
Number of extensions: 1911
Number of successful extensions: 27
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23753925
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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