Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP02_T7_M08
(786 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY681966-1|AAV87216.1| 2069|Homo sapiens citron protein. 31 3.6
AY257469-1|AAP13528.1| 2027|Homo sapiens rho/rac-interacting cit... 31 3.6
AC002563-2|AAB71327.1| 1286|Homo sapiens WUGSC:H_127H14.1 protein. 31 3.6
BC028012-1|AAH28012.1| 670|Homo sapiens PML-RARA regulated adap... 31 4.7
AJ272324-1|CAC17767.1| 718|Homo sapiens adaptor molecule-1 prot... 31 4.7
X05825-1|CAA29265.1| 536|Homo sapiens CSF-4 protein. 31 6.2
U22386-1|AAA64849.1| 438|Homo sapiens macrophage-colony stimula... 31 6.2
U17986-1|AAA86990.1| 732|Homo sapiens GABA/noradrenaline transp... 31 6.2
M64592-1|AAA59572.1| 554|Homo sapiens macrophage colony-stimula... 31 6.2
M37435-1|AAA52117.1| 554|Homo sapiens CSF1 protein. 31 6.2
M27087-1|AAA59573.1| 553|Homo sapiens macrophage colony-stimula... 31 6.2
BC021117-1|AAH21117.1| 554|Homo sapiens colony stimulating fact... 31 6.2
AL450468-2|CAH71146.1| 554|Homo sapiens colony stimulating fact... 31 6.2
AL450468-1|CAH71147.1| 438|Homo sapiens colony stimulating fact... 31 6.2
AB208952-1|BAD92189.1| 515|Homo sapiens colony stimulating fact... 31 6.2
>AY681966-1|AAV87216.1| 2069|Homo sapiens citron protein.
Length = 2069
Score = 31.5 bits (68), Expect = 3.6
Identities = 17/53 (32%), Positives = 24/53 (45%)
Frame = +2
Query: 116 RGPKDFRTHPLNDSPXTLTPDEVGGLPRSTLQPDGAAHPKDAQPTEPSRRIEG 274
RGP R+ P P T + S P+G +HP+ +P+ P R EG
Sbjct: 1954 RGPSTSRSSPNKRGPPTYNEHITKRVASSPAPPEGPSHPR--EPSTPHRYREG 2004
>AY257469-1|AAP13528.1| 2027|Homo sapiens rho/rac-interacting citron
kinase protein.
Length = 2027
Score = 31.5 bits (68), Expect = 3.6
Identities = 17/53 (32%), Positives = 24/53 (45%)
Frame = +2
Query: 116 RGPKDFRTHPLNDSPXTLTPDEVGGLPRSTLQPDGAAHPKDAQPTEPSRRIEG 274
RGP R+ P P T + S P+G +HP+ +P+ P R EG
Sbjct: 1912 RGPSTSRSSPNKRGPPTYNEHITKRVASSPAPPEGPSHPR--EPSTPHRYREG 1962
>AC002563-2|AAB71327.1| 1286|Homo sapiens WUGSC:H_127H14.1 protein.
Length = 1286
Score = 31.5 bits (68), Expect = 3.6
Identities = 17/53 (32%), Positives = 24/53 (45%)
Frame = +2
Query: 116 RGPKDFRTHPLNDSPXTLTPDEVGGLPRSTLQPDGAAHPKDAQPTEPSRRIEG 274
RGP R+ P P T + S P+G +HP+ +P+ P R EG
Sbjct: 1171 RGPSTSRSSPNKRGPPTYNEHITKRVASSPAPPEGPSHPR--EPSTPHRYREG 1221
>BC028012-1|AAH28012.1| 670|Homo sapiens PML-RARA regulated adaptor
molecule 1 protein.
Length = 670
Score = 31.1 bits (67), Expect = 4.7
Identities = 15/44 (34%), Positives = 23/44 (52%)
Frame = +2
Query: 122 PKDFRTHPLNDSPXTLTPDEVGGLPRSTLQPDGAAHPKDAQPTE 253
PK PL+D P E+G L R++ +P+ + PK +P E
Sbjct: 270 PKKASQPPLSDFPKKPPQPELGDLTRTSSEPEVSVLPKRPRPAE 313
>AJ272324-1|CAC17767.1| 718|Homo sapiens adaptor molecule-1
protein.
Length = 718
Score = 31.1 bits (67), Expect = 4.7
Identities = 15/44 (34%), Positives = 23/44 (52%)
Frame = +2
Query: 122 PKDFRTHPLNDSPXTLTPDEVGGLPRSTLQPDGAAHPKDAQPTE 253
PK PL+D P E+G L R++ +P+ + PK +P E
Sbjct: 318 PKKASQPPLSDFPKKPPQPELGDLTRTSSEPEVSVLPKRPRPAE 361
>X05825-1|CAA29265.1| 536|Homo sapiens CSF-4 protein.
Length = 536
Score = 30.7 bits (66), Expect = 6.2
Identities = 22/63 (34%), Positives = 28/63 (44%), Gaps = 5/63 (7%)
Frame = +1
Query: 223 GSPQGRPADGAFEANRRL*NVGRLGT-----AARQAAQTVPLVPRNTPLDQNQPAGSGRD 387
GSPQ RP+ GAF +GT A A +P VP+ T L ++P G
Sbjct: 258 GSPQPRPSVGAFNPGMEDILDSAMGTNWVPEEASGEASEIP-VPQGTELSPSRPGGGSMQ 316
Query: 388 TLP 396
T P
Sbjct: 317 TEP 319
>U22386-1|AAA64849.1| 438|Homo sapiens macrophage-colony
stimulating factor gamma precursor protein.
Length = 438
Score = 30.7 bits (66), Expect = 6.2
Identities = 22/63 (34%), Positives = 28/63 (44%), Gaps = 5/63 (7%)
Frame = +1
Query: 223 GSPQGRPADGAFEANRRL*NVGRLGT-----AARQAAQTVPLVPRNTPLDQNQPAGSGRD 387
GSPQ RP+ GAF +GT A A +P VP+ T L ++P G
Sbjct: 276 GSPQPRPSVGAFNPGMEDILDSAMGTNWVPEEASGEASEIP-VPQGTELSPSRPGGGSMQ 334
Query: 388 TLP 396
T P
Sbjct: 335 TEP 337
>U17986-1|AAA86990.1| 732|Homo sapiens GABA/noradrenaline
transporter protein.
Length = 732
Score = 30.7 bits (66), Expect = 6.2
Identities = 17/54 (31%), Positives = 27/54 (50%)
Frame = +1
Query: 85 TQRSAGVESRSRAQGF*DPPTKRLPXHSYTRRGRGATAVNTTTRRRGSPQGRPA 246
++R G + ++ PPT LP HSY+ A + + RR +P+G PA
Sbjct: 136 SRRGGGPDPDPISRSLPGPPTPALPTHSYSSHSPRAPRLLSPLRR--APRGSPA 187
>M64592-1|AAA59572.1| 554|Homo sapiens macrophage
colony-stimulating factor protein.
Length = 554
Score = 30.7 bits (66), Expect = 6.2
Identities = 22/63 (34%), Positives = 28/63 (44%), Gaps = 5/63 (7%)
Frame = +1
Query: 223 GSPQGRPADGAFEANRRL*NVGRLGT-----AARQAAQTVPLVPRNTPLDQNQPAGSGRD 387
GSPQ RP+ GAF +GT A A +P VP+ T L ++P G
Sbjct: 276 GSPQPRPSVGAFNPGMEDILDSAMGTNWVPEEASGEASEIP-VPQGTELSPSRPGGGSMQ 334
Query: 388 TLP 396
T P
Sbjct: 335 TEP 337
>M37435-1|AAA52117.1| 554|Homo sapiens CSF1 protein.
Length = 554
Score = 30.7 bits (66), Expect = 6.2
Identities = 22/63 (34%), Positives = 28/63 (44%), Gaps = 5/63 (7%)
Frame = +1
Query: 223 GSPQGRPADGAFEANRRL*NVGRLGT-----AARQAAQTVPLVPRNTPLDQNQPAGSGRD 387
GSPQ RP+ GAF +GT A A +P VP+ T L ++P G
Sbjct: 276 GSPQPRPSVGAFNPGMEDILDSAMGTNWVPEEASGEASEIP-VPQGTELSPSRPGGGSMQ 334
Query: 388 TLP 396
T P
Sbjct: 335 TEP 337
>M27087-1|AAA59573.1| 553|Homo sapiens macrophage
colony-stimulating factor protein.
Length = 553
Score = 30.7 bits (66), Expect = 6.2
Identities = 22/63 (34%), Positives = 28/63 (44%), Gaps = 5/63 (7%)
Frame = +1
Query: 223 GSPQGRPADGAFEANRRL*NVGRLGT-----AARQAAQTVPLVPRNTPLDQNQPAGSGRD 387
GSPQ RP+ GAF +GT A A +P VP+ T L ++P G
Sbjct: 276 GSPQPRPSVGAFNPGMEDILDSAMGTNWVPEEASGEASEIP-VPQGTELSPSRPGGGSMQ 334
Query: 388 TLP 396
T P
Sbjct: 335 TEP 337
>BC021117-1|AAH21117.1| 554|Homo sapiens colony stimulating factor
1 (macrophage) protein.
Length = 554
Score = 30.7 bits (66), Expect = 6.2
Identities = 22/63 (34%), Positives = 28/63 (44%), Gaps = 5/63 (7%)
Frame = +1
Query: 223 GSPQGRPADGAFEANRRL*NVGRLGT-----AARQAAQTVPLVPRNTPLDQNQPAGSGRD 387
GSPQ RP+ GAF +GT A A +P VP+ T L ++P G
Sbjct: 276 GSPQPRPSVGAFNPGMEDILDSAMGTNWVPEEASGEASEIP-VPQGTELSPSRPGGGSMQ 334
Query: 388 TLP 396
T P
Sbjct: 335 TEP 337
>AL450468-2|CAH71146.1| 554|Homo sapiens colony stimulating factor
1 (macrophage) protein.
Length = 554
Score = 30.7 bits (66), Expect = 6.2
Identities = 22/63 (34%), Positives = 28/63 (44%), Gaps = 5/63 (7%)
Frame = +1
Query: 223 GSPQGRPADGAFEANRRL*NVGRLGT-----AARQAAQTVPLVPRNTPLDQNQPAGSGRD 387
GSPQ RP+ GAF +GT A A +P VP+ T L ++P G
Sbjct: 276 GSPQPRPSVGAFNPGMEDILDSAMGTNWVPEEASGEASEIP-VPQGTELSPSRPGGGSMQ 334
Query: 388 TLP 396
T P
Sbjct: 335 TEP 337
>AL450468-1|CAH71147.1| 438|Homo sapiens colony stimulating factor
1 (macrophage) protein.
Length = 438
Score = 30.7 bits (66), Expect = 6.2
Identities = 22/63 (34%), Positives = 28/63 (44%), Gaps = 5/63 (7%)
Frame = +1
Query: 223 GSPQGRPADGAFEANRRL*NVGRLGT-----AARQAAQTVPLVPRNTPLDQNQPAGSGRD 387
GSPQ RP+ GAF +GT A A +P VP+ T L ++P G
Sbjct: 276 GSPQPRPSVGAFNPGMEDILDSAMGTNWVPEEASGEASEIP-VPQGTELSPSRPGGGSMQ 334
Query: 388 TLP 396
T P
Sbjct: 335 TEP 337
>AB208952-1|BAD92189.1| 515|Homo sapiens colony stimulating factor
1 isoform a precursor variant protein.
Length = 515
Score = 30.7 bits (66), Expect = 6.2
Identities = 22/63 (34%), Positives = 28/63 (44%), Gaps = 5/63 (7%)
Frame = +1
Query: 223 GSPQGRPADGAFEANRRL*NVGRLGT-----AARQAAQTVPLVPRNTPLDQNQPAGSGRD 387
GSPQ RP+ GAF +GT A A +P VP+ T L ++P G
Sbjct: 330 GSPQPRPSVGAFNPGMEDILDSAMGTNWVPEEASGEASEIP-VPQGTELSPSRPGGGSMQ 388
Query: 388 TLP 396
T P
Sbjct: 389 TEP 391
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 98,016,587
Number of Sequences: 237096
Number of extensions: 2224166
Number of successful extensions: 9430
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 7539
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9348
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9590293096
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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