Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP02_T7_M08
(786 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z22177-7|CAA80149.1| 171|Caenorhabditis elegans Hypothetical pr... 29 2.9
Z29443-8|CAE45742.1| 455|Caenorhabditis elegans Hypothetical pr... 29 5.0
Z29443-7|CAA82571.2| 497|Caenorhabditis elegans Hypothetical pr... 29 5.0
U97016-4|AAN84886.1| 2692|Caenorhabditis elegans Lethal protein ... 29 5.0
Z82274-16|CAC70096.1| 1119|Caenorhabditis elegans Hypothetical p... 28 8.7
Z82274-15|CAB05234.2| 1113|Caenorhabditis elegans Hypothetical p... 28 8.7
U55366-2|AAA97981.1| 156|Caenorhabditis elegans Hypothetical pr... 28 8.7
AL132951-13|CAC70127.1| 1119|Caenorhabditis elegans Hypothetical... 28 8.7
AL132951-12|CAC44311.1| 1113|Caenorhabditis elegans Hypothetical... 28 8.7
AF283323-1|AAG18575.1| 1113|Caenorhabditis elegans synaptojanin ... 28 8.7
AF283322-1|AAG18574.1| 1119|Caenorhabditis elegans synaptojanin ... 28 8.7
>Z22177-7|CAA80149.1| 171|Caenorhabditis elegans Hypothetical
protein ZK512.8 protein.
Length = 171
Score = 29.5 bits (63), Expect = 2.9
Identities = 21/64 (32%), Positives = 28/64 (43%), Gaps = 2/64 (3%)
Frame = +2
Query: 110 ADRGPKDFRTH-PLNDSPXTLT-PDEVGGLPRSTLQPDGAAHPKDAQPTEPSRRIEGSET 283
AD G TH L +P DE+ L R + D HP + + +P + E S T
Sbjct: 38 ADEGKSPVSTHLSLASNPTEFKFMDEIALLKRGRIDKDAPKHPYNRRGQQPMMKKEISVT 97
Query: 284 SAVS 295
SA S
Sbjct: 98 SAHS 101
>Z29443-8|CAE45742.1| 455|Caenorhabditis elegans Hypothetical
protein T07C4.9b protein.
Length = 455
Score = 28.7 bits (61), Expect = 5.0
Identities = 12/34 (35%), Positives = 16/34 (47%)
Frame = -3
Query: 568 YPSPPSRGSEKGLCPTPAPVDGGFPPVKVKGRPE 467
YP P G G P P GG+PP + + P+
Sbjct: 78 YPQAPQYGFSGGQGSAPQPNQGGYPPQQQQYPPQ 111
>Z29443-7|CAA82571.2| 497|Caenorhabditis elegans Hypothetical
protein T07C4.9a protein.
Length = 497
Score = 28.7 bits (61), Expect = 5.0
Identities = 12/34 (35%), Positives = 16/34 (47%)
Frame = -3
Query: 568 YPSPPSRGSEKGLCPTPAPVDGGFPPVKVKGRPE 467
YP P G G P P GG+PP + + P+
Sbjct: 120 YPQAPQYGFSGGQGSAPQPNQGGYPPQQQQYPPQ 153
>U97016-4|AAN84886.1| 2692|Caenorhabditis elegans Lethal protein 363,
isoform b protein.
Length = 2692
Score = 28.7 bits (61), Expect = 5.0
Identities = 13/22 (59%), Positives = 13/22 (59%)
Frame = -3
Query: 580 PLRTYPSPPSRGSEKGLCPTPA 515
PL YP PP GS GL P PA
Sbjct: 1991 PLSDYPVPPPLGSLVGLPPMPA 2012
>Z82274-16|CAC70096.1| 1119|Caenorhabditis elegans Hypothetical
protein JC8.10b protein.
Length = 1119
Score = 27.9 bits (59), Expect = 8.7
Identities = 13/30 (43%), Positives = 15/30 (50%)
Frame = -3
Query: 580 PLRTYPSPPSRGSEKGLCPTPAPVDGGFPP 491
P T P PP+RG+ G P PV PP
Sbjct: 1077 PPSTIPLPPTRGASVGPGPPAVPVRKAPPP 1106
>Z82274-15|CAB05234.2| 1113|Caenorhabditis elegans Hypothetical
protein JC8.10a protein.
Length = 1113
Score = 27.9 bits (59), Expect = 8.7
Identities = 13/30 (43%), Positives = 15/30 (50%)
Frame = -3
Query: 580 PLRTYPSPPSRGSEKGLCPTPAPVDGGFPP 491
P T P PP+RG+ G P PV PP
Sbjct: 1071 PPSTIPLPPTRGASVGPGPPAVPVRKAPPP 1100
>U55366-2|AAA97981.1| 156|Caenorhabditis elegans Hypothetical
protein F41F3.3 protein.
Length = 156
Score = 27.9 bits (59), Expect = 8.7
Identities = 12/21 (57%), Positives = 12/21 (57%)
Frame = -3
Query: 562 SPPSRGSEKGLCPTPAPVDGG 500
S PS G G CP PAP GG
Sbjct: 56 SLPSLGGGGGCCPPPAPACGG 76
>AL132951-13|CAC70127.1| 1119|Caenorhabditis elegans Hypothetical
protein JC8.10b protein.
Length = 1119
Score = 27.9 bits (59), Expect = 8.7
Identities = 13/30 (43%), Positives = 15/30 (50%)
Frame = -3
Query: 580 PLRTYPSPPSRGSEKGLCPTPAPVDGGFPP 491
P T P PP+RG+ G P PV PP
Sbjct: 1077 PPSTIPLPPTRGASVGPGPPAVPVRKAPPP 1106
>AL132951-12|CAC44311.1| 1113|Caenorhabditis elegans Hypothetical
protein JC8.10a protein.
Length = 1113
Score = 27.9 bits (59), Expect = 8.7
Identities = 13/30 (43%), Positives = 15/30 (50%)
Frame = -3
Query: 580 PLRTYPSPPSRGSEKGLCPTPAPVDGGFPP 491
P T P PP+RG+ G P PV PP
Sbjct: 1071 PPSTIPLPPTRGASVGPGPPAVPVRKAPPP 1100
>AF283323-1|AAG18575.1| 1113|Caenorhabditis elegans synaptojanin
UNC-26B protein.
Length = 1113
Score = 27.9 bits (59), Expect = 8.7
Identities = 13/30 (43%), Positives = 15/30 (50%)
Frame = -3
Query: 580 PLRTYPSPPSRGSEKGLCPTPAPVDGGFPP 491
P T P PP+RG+ G P PV PP
Sbjct: 1071 PPSTIPLPPTRGASVGPGPPAVPVRKAPPP 1100
>AF283322-1|AAG18574.1| 1119|Caenorhabditis elegans synaptojanin
UNC-26A protein.
Length = 1119
Score = 27.9 bits (59), Expect = 8.7
Identities = 13/30 (43%), Positives = 15/30 (50%)
Frame = -3
Query: 580 PLRTYPSPPSRGSEKGLCPTPAPVDGGFPP 491
P T P PP+RG+ G P PV PP
Sbjct: 1077 PPSTIPLPPTRGASVGPGPPAVPVRKAPPP 1106
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,897,387
Number of Sequences: 27780
Number of extensions: 276767
Number of successful extensions: 1286
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 918
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1284
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1903721438
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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