Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP02_T7_L23
(838 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
12_01_0302 - 2286171-2286341,2286747-2286968 29 4.6
11_06_0069 + 19770182-19770379,19770470-19772703,19772789-197730... 29 6.1
11_04_0270 - 15590955-15591146,15591421-15591502,15591592-155917... 29 6.1
10_07_0107 - 12936839-12937030,12937305-12937386,12937476-129375... 29 6.1
09_04_0737 - 19822822-19822973,19823069-19823135,19823666-198238... 29 6.1
09_04_0487 - 18014469-18014660,18014935-18015016,18015297-180155... 29 6.1
09_02_0349 - 7632140-7632234,7632348-7632449,7632864-7632962,763... 29 6.1
08_01_0440 + 3875422-3875619,3875710-3876382,3876449-3877943,387... 29 6.1
04_03_0709 + 18902507-18902704,18902795-18905028,18905114-189053... 29 6.1
04_02_0026 + 8708765-8710935,8711021-8711272,8711353-8711463,871... 29 6.1
03_04_0123 + 17475020-17475243,17475367-17475445,17476295-174763... 29 6.1
02_05_0640 - 30558523-30559027,30559123-30559252,30559388-305598... 29 6.1
02_01_0374 - 2702804-2702995,2703270-2703351,2703441-2703551,270... 29 6.1
05_01_0367 - 2874429-2874483,2876274-2876345,2876453-2879613,287... 28 8.0
>12_01_0302 - 2286171-2286341,2286747-2286968
Length = 130
Score = 29.1 bits (62), Expect = 4.6
Identities = 13/34 (38%), Positives = 21/34 (61%)
Frame = +1
Query: 82 RLQRSRKKHGEDLPTGGRSRRKGEKLE*MQREEQ 183
RL+R RK + D+ G + +GEKLE + +E+
Sbjct: 57 RLERLRKGYARDVRAAGAMKVRGEKLENWREKEK 90
>11_06_0069 +
19770182-19770379,19770470-19772703,19772789-19773040,
19773121-19773231,19773321-19773402,19773677-19773868
Length = 1022
Score = 28.7 bits (61), Expect = 6.1
Identities = 21/78 (26%), Positives = 31/78 (39%)
Frame = -3
Query: 677 PDHQXPRFHTPTTPDLTSISINPLTPX*KEFAPGLKPPLSSEAPSAYLTPSSLGMXKGVS 498
P+ PR H P+ P L S P P +P +PPL + P S +
Sbjct: 574 PEPPSPR-HPPSPPPLRSPPRQPTPPP----SPSQQPPLPTPQPVQASPTSPTKQHAPPA 628
Query: 497 PPYFQVNDESQASRLISR 444
PP Q + + S L+ +
Sbjct: 629 PPSVQTSPPTPQSALVEQ 646
>11_04_0270 -
15590955-15591146,15591421-15591502,15591592-15591702,
15591783-15592034,15592120-15594353,15594444-15594641
Length = 1022
Score = 28.7 bits (61), Expect = 6.1
Identities = 21/78 (26%), Positives = 31/78 (39%)
Frame = -3
Query: 677 PDHQXPRFHTPTTPDLTSISINPLTPX*KEFAPGLKPPLSSEAPSAYLTPSSLGMXKGVS 498
P+ PR H P+ P L S P P +P +PPL + P S +
Sbjct: 574 PEPPSPR-HPPSPPPLRSPPRQPTPPP----SPSQQPPLPTPQPVQASPTSPTKQHAPPA 628
Query: 497 PPYFQVNDESQASRLISR 444
PP Q + + S L+ +
Sbjct: 629 PPSVQTSPPTPQSALVEQ 646
>10_07_0107 -
12936839-12937030,12937305-12937386,12937476-12937586,
12937667-12937918,12938004-12940237,12940328-12940525
Length = 1022
Score = 28.7 bits (61), Expect = 6.1
Identities = 21/78 (26%), Positives = 31/78 (39%)
Frame = -3
Query: 677 PDHQXPRFHTPTTPDLTSISINPLTPX*KEFAPGLKPPLSSEAPSAYLTPSSLGMXKGVS 498
P+ PR H P+ P L S P P +P +PPL + P S +
Sbjct: 574 PEPPSPR-HLPSPPPLRSPPRQPTPPP----SPSQQPPLPTPQPVQASPTSPTKQHAPPA 628
Query: 497 PPYFQVNDESQASRLISR 444
PP Q + + S L+ +
Sbjct: 629 PPSVQTSPPTPQSALVEQ 646
>09_04_0737 -
19822822-19822973,19823069-19823135,19823666-19823822,
19824003-19824177,19824364-19824481,19824676-19824874,
19824983-19825062,19825141-19825257,19825791-19825961,
19826121-19826597
Length = 570
Score = 28.7 bits (61), Expect = 6.1
Identities = 18/49 (36%), Positives = 25/49 (51%)
Frame = +2
Query: 74 FYVDSKGVGRNMARIYQLAVDLGGRERSLNRCREKSSFVVLKNRPDVVV 220
F+VD G G + ++++LAV+ G R CR VV DVVV
Sbjct: 93 FHVDPTGDGSSFLQLHRLAVE-GTRRLLAACCRSGVRTVVYTGSADVVV 140
>09_04_0487 -
18014469-18014660,18014935-18015016,18015297-18015548,
18015634-18017789
Length = 893
Score = 28.7 bits (61), Expect = 6.1
Identities = 21/78 (26%), Positives = 31/78 (39%)
Frame = -3
Query: 677 PDHQXPRFHTPTTPDLTSISINPLTPX*KEFAPGLKPPLSSEAPSAYLTPSSLGMXKGVS 498
P+ PR H P+ P L S P P +P +PPL + P S +
Sbjct: 482 PEPPSPR-HPPSPPPLRSPPRQPTPPP----SPSQQPPLPAPQPVQASPTSPAKQHAPPA 536
Query: 497 PPYFQVNDESQASRLISR 444
PP Q + + S L+ +
Sbjct: 537 PPSVQTSPPTPQSALVEQ 554
>09_02_0349 -
7632140-7632234,7632348-7632449,7632864-7632962,
7633517-7633622,7633897-7633978,7634068-7634178,
7634259-7634510,7634596-7635688,7636157-7636829,
7636920-7637117
Length = 936
Score = 28.7 bits (61), Expect = 6.1
Identities = 21/78 (26%), Positives = 31/78 (39%)
Frame = -3
Query: 677 PDHQXPRFHTPTTPDLTSISINPLTPX*KEFAPGLKPPLSSEAPSAYLTPSSLGMXKGVS 498
P+ PR H P+ P L S P P +P +PPL + P S +
Sbjct: 418 PEPPSPR-HPPSPPPLRSPPRQPTPPP----SPSQQPPLPAPQPVQASPTSPAKQHAPPA 472
Query: 497 PPYFQVNDESQASRLISR 444
PP Q + + S L+ +
Sbjct: 473 PPSVQTSPPTPQSALVEQ 490
>08_01_0440 +
3875422-3875619,3875710-3876382,3876449-3877943,
3878029-3878280,3878361-3878471,3878561-3878642,
3878917-3879108
Length = 1000
Score = 28.7 bits (61), Expect = 6.1
Identities = 21/78 (26%), Positives = 31/78 (39%)
Frame = -3
Query: 677 PDHQXPRFHTPTTPDLTSISINPLTPX*KEFAPGLKPPLSSEAPSAYLTPSSLGMXKGVS 498
P+ PR H P+ P L S P P +P +PPL + P S +
Sbjct: 552 PEPPSPR-HPPSPPPLRSPPRQPTPPP----SPSQQPPLPTPQPVQASPTSPTKQHAPPA 606
Query: 497 PPYFQVNDESQASRLISR 444
PP Q + + S L+ +
Sbjct: 607 PPSVQTSPPTPQSALVEQ 624
>04_03_0709 +
18902507-18902704,18902795-18905028,18905114-18905365,
18905446-18905556,18905646-18905727,18906002-18906193
Length = 1022
Score = 28.7 bits (61), Expect = 6.1
Identities = 21/78 (26%), Positives = 31/78 (39%)
Frame = -3
Query: 677 PDHQXPRFHTPTTPDLTSISINPLTPX*KEFAPGLKPPLSSEAPSAYLTPSSLGMXKGVS 498
P+ PR H P+ P L S P P +P +PPL + P S +
Sbjct: 574 PEPPSPR-HPPSPPPLRSPPRQPTPPP----SPSQQPPLPTPQPVQASPTSPTKQHAPPA 628
Query: 497 PPYFQVNDESQASRLISR 444
PP Q + + S L+ +
Sbjct: 629 PPSVQTSPPTPQSALVEQ 646
>04_02_0026 +
8708765-8710935,8711021-8711272,8711353-8711463,
8711553-8711634,8711909-8712100
Length = 935
Score = 28.7 bits (61), Expect = 6.1
Identities = 21/78 (26%), Positives = 31/78 (39%)
Frame = -3
Query: 677 PDHQXPRFHTPTTPDLTSISINPLTPX*KEFAPGLKPPLSSEAPSAYLTPSSLGMXKGVS 498
P+ PR H P+ P L S P P +P +PPL + P S +
Sbjct: 487 PEPPSPR-HQPSPPPLRSPPRQPTPPP----SPSQQPPLPAPQPVQASPTSPAKQHAPPA 541
Query: 497 PPYFQVNDESQASRLISR 444
PP Q + + S L+ +
Sbjct: 542 PPSVQTSPPTPQSALVEQ 559
>03_04_0123 +
17475020-17475243,17475367-17475445,17476295-17476393,
17476499-17476682,17477139-17477206,17477530-17477787,
17477996-17478049,17478149-17478355,17478507-17478633,
17479409-17479575
Length = 488
Score = 28.7 bits (61), Expect = 6.1
Identities = 15/44 (34%), Positives = 19/44 (43%), Gaps = 2/44 (4%)
Frame = -2
Query: 732 GGXXLXIXPPXPXISGTST--RSSNXPIPYTNHPRLNIHFHQSP 607
GG L P P +GT S P+PY N PR + +P
Sbjct: 221 GGQLLGRPAPSPGATGTPNFENVSTPPMPYANSPRSGTNMMNTP 264
>02_05_0640 - 30558523-30559027,30559123-30559252,30559388-30559868,
30560292-30560346,30560537-30560613,30561228-30561315,
30561490-30561593,30562050-30562231,30562347-30563109,
30563195-30563438,30564513-30564658,30565158-30565283,
30565404-30565517,30565595-30565762,30566283-30566528,
30566605-30566767,30566970-30567064,30567274-30567357,
30567769-30568055,30568359-30568572,30568923-30569140,
30569386-30569623,30570312-30571118,30571202-30571301,
30571694-30571737,30571824-30571973
Length = 1942
Score = 28.7 bits (61), Expect = 6.1
Identities = 20/65 (30%), Positives = 30/65 (46%)
Frame = -1
Query: 241 PPFDTVLYDNIRTVLKDNKTALLSASIQASLPSSEIYRQLVDPRHVSSDSFGVYVKS*SL 62
P F T+LY ++KD S+ L S+ Y L+DP S D+ + +
Sbjct: 1349 PEFHTLLYAEAARIIKDCWWLADSSRPVKELDSAVGYA-LLDPTWASQDNTSTAIGNIVA 1407
Query: 61 ILHSF 47
+LHSF
Sbjct: 1408 LLHSF 1412
>02_01_0374 -
2702804-2702995,2703270-2703351,2703441-2703551,
2703632-2703883,2703969-2704798,2704895-2706202,
2706293-2706490
Length = 990
Score = 28.7 bits (61), Expect = 6.1
Identities = 21/78 (26%), Positives = 31/78 (39%)
Frame = -3
Query: 677 PDHQXPRFHTPTTPDLTSISINPLTPX*KEFAPGLKPPLSSEAPSAYLTPSSLGMXKGVS 498
P+ PR H P+ P L S P P +P +PPL + P S +
Sbjct: 542 PEPPSPR-HPPSPPPLRSPPRQPTPPP----SPSQQPPLPTPQPVQASPTSPTKQHAPPA 596
Query: 497 PPYFQVNDESQASRLISR 444
PP Q + + S L+ +
Sbjct: 597 PPSVQTSPPTPQSALVEQ 614
>05_01_0367 - 2874429-2874483,2876274-2876345,2876453-2879613,
2879715-2879973,2880060-2880346,2880423-2880758,
2880862-2881003,2881077-2881297,2881379-2881540,
2881617-2881775,2881860-2882159,2882834-2883097,
2883133-2883243,2883902-2883988
Length = 1871
Score = 28.3 bits (60), Expect = 8.0
Identities = 17/57 (29%), Positives = 24/57 (42%), Gaps = 2/57 (3%)
Frame = -3
Query: 653 HTPTTPDL--TSISINPLTPX*KEFAPGLKPPLSSEAPSAYLTPSSLGMXKGVSPPY 489
++PT+P TS +P +P +P P PS +PSS SP Y
Sbjct: 1780 YSPTSPAYSPTSPGYSPTSPSYSPSSPSYNPSSVKYTPSHAYSPSSPNYYSSTSPTY 1836
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,502,904
Number of Sequences: 37544
Number of extensions: 426289
Number of successful extensions: 1201
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1158
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1198
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2315199948
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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