Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP02_T7_L23
         (838 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB033111-1|BAA86599.1|  785|Homo sapiens KIAA1285 protein protein.     31   3.9  
AK126216-1|BAC86490.1|  135|Homo sapiens protein ( Homo sapiens ...    30   9.0  

>AB033111-1|BAA86599.1|  785|Homo sapiens KIAA1285 protein protein.
          Length = 785

 Score = 31.5 bits (68), Expect = 3.9
 Identities = 13/44 (29%), Positives = 23/44 (52%)
 Frame = -3

Query: 683 HQPDHQXPRFHTPTTPDLTSISINPLTPX*KEFAPGLKPPLSSE 552
           H P HQ    H+P  P+   ++++P  P   +  P L+ P+S +
Sbjct: 145 HSPHHQEAPVHSPEAPEKDPLTLSPTVPE-TDMDPLLQSPVSQK 187


>AK126216-1|BAC86490.1|  135|Homo sapiens protein ( Homo sapiens
           cDNA FLJ44228 fis, clone THYMU3006371. ).
          Length = 135

 Score = 30.3 bits (65), Expect = 9.0
 Identities = 18/56 (32%), Positives = 23/56 (41%), Gaps = 2/56 (3%)
 Frame = -3

Query: 707 HPXLGFRVHQPDHQXPRFHTPTTPDLTSISIN--PLTPX*KEFAPGLKPPLSSEAP 546
           HP      H   H     HTP+ P L S+     P +P   +  PG  PP   E+P
Sbjct: 66  HPNRHTHAHTHTHTHTHTHTPSFPLLLSLGTGAPPCSPCSTQ-PPGRSPPTFDESP 120


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 108,232,697
Number of Sequences: 237096
Number of extensions: 2236831
Number of successful extensions: 8950
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 8584
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8950
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10538170902
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)